RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 SPAG7O75391 227 aa13.96□□□□□ -0.18
MSH6-210ENST00000540021 UBOX5O94941 541 aa13.96□□□□□ -0.18
MSH6-210ENST00000540021 DDX23Q9BUQ8 820 aaKnown RBP13.96□□□□□ -0.18
MSH6-210ENST00000540021 AMNQ9BXJ7 453 aa13.96□□□□□ -0.18
MSH6-210ENST00000540021 IKZF4Q9H2S9 585 aa13.96□□□□□ -0.18
MSH6-210ENST00000540021 ANAPC5Q9UJX4 755 aa13.96□□□□□ -0.18
MSH6-210ENST00000540021 SLURP2P0DP57 97 aa13.95□□□□□ -0.18
MSH6-210ENST00000540021 ICA1Q05084 483 aa13.95□□□□□ -0.18
MSH6-210ENST00000540021 INTUQ9ULD6 942 aa13.95□□□□□ -0.18
MSH6-210ENST00000540021 TMEM120BA0PK00 339 aa13.95□□□□□ -0.18
MSH6-210ENST00000540021 NOL4O94818 638 aa13.95□□□□□ -0.18
MSH6-210ENST00000540021 ANP32DO95626 131 aa13.95□□□□□ -0.18
MSH6-210ENST00000540021 CERKLQ49MI3 558 aaPredicted RBP13.95□□□□□ -0.18
MSH6-210ENST00000540021 CATSPER3Q86XQ3 398 aa13.95□□□□□ -0.18
MSH6-210ENST00000540021 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.95□□□□□ -0.18
MSH6-210ENST00000540021 PRCCQ92733 491 aaPredicted RBP13.95□□□□□ -0.18
MSH6-210ENST00000540021 MCUR1Q96AQ8 359 aa13.95□□□□□ -0.18
MSH6-210ENST00000540021 INTS2Q9H0H0 1204 aaKnown RBP13.95□□□□□ -0.18
MSH6-210ENST00000540021 GLT8D2Q9H1C3 349 aa13.95□□□□□ -0.18
MSH6-210ENST00000540021 PABPC3Q9H361 631 aaKnown RBP13.95□□□□□ -0.18
MSH6-210ENST00000540021 HOMER2Q9NSB8 354 aa13.95□□□□□ -0.18
MSH6-210ENST00000540021 SUCLA2Q9P2R7 463 aaPredicted RBP13.95□□□□□ -0.18
MSH6-210ENST00000540021 KYNUQ16719 465 aa13.95□□□□□ -0.18
MSH6-210ENST00000540021 CLEC4GQ6UXB4 293 aa13.95□□□□□ -0.18
MSH6-210ENST00000540021 RNF207Q6ZRF8 634 aa13.95□□□□□ -0.18
MSH6-210ENST00000540021 TTC7AQ9ULT0 858 aaPredicted RBP13.95□□□□□ -0.18
MSH6-210ENST00000540021 SYNGAP1Q96PV0 1343 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 ARFGEF2Q9Y6D5 1785 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 DDX3XO00571 662 aaKnown RBP eCLIP13.94□□□□□ -0.187e-19■■■■■ 42.4
MSH6-210ENST00000540021 STMN2Q93045 179 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 C9orf72Q96LT7 481 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 FAM129AQ9BZQ8 928 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 ABCF3Q9NUQ8 709 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 AIPL1Q9NZN9 384 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 PODXLO00592 558 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 ATP2A1O14983 1001 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 CLDN3O15551 220 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 ATP6V1G2O95670 118 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 MAPK4P31152 587 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 SSTR3P32745 418 aaPredicted RBP13.94□□□□□ -0.18
MSH6-210ENST00000540021 MTM1Q13496 603 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 PLCB4Q15147 1175 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 SEPT14Q6ZU15 432 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 CPXCR1Q8N123 301 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 VPS52Q8N1B4 723 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 SLC30A5Q8TAD4 765 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 IQCGQ9H095 443 aaKnown RBP13.94□□□□□ -0.18
MSH6-210ENST00000540021 hCG_1984214I3L0E3 225 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 ZNF713Q8N859 430 aaPredicted RBP13.94□□□□□ -0.18
MSH6-210ENST00000540021 KIFAP3Q92845 792 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 TATDN2Q93075 761 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 DYDC2Q96IM9 177 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 C8orf37Q96NL8 207 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 ZNF148Q9UQR1 794 aa13.94□□□□□ -0.18
MSH6-210ENST00000540021 USP15Q9Y4E8 981 aaPredicted RBP13.94□□□□□ -0.18
MSH6-210ENST00000540021 NID2Q14112 1375 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 RASA4BC9J798 803 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 RASA4O43374 803 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 SORBS3O60504 671 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 SMIM24O75264 130 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 COMTP21964 271 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 TNFRSF8P28908 595 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 IL9RQ01113 521 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 TSNAXIP1Q2TAA8 658 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 EDRF1Q3B7T1 1238 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 GNPTABQ3T906 1256 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 RHOT2Q8IXI1 618 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 LRRC8CQ8TDW0 803 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 ELMO3Q96BJ8 720 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.93□□□□□ -0.18
MSH6-210ENST00000540021 NR2E1Q9Y466 385 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 ABCB11O95342 1321 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 PDXKO00764 312 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 KIF1CO43896 1103 aaKnown RBP13.93□□□□□ -0.18
MSH6-210ENST00000540021 CHRNA3P32297 505 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 GPC5P78333 572 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 ZNF543Q08ER8 600 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 SLC35G1Q2M3R5 365 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 CAPRIN2Q6IMN6 1127 aaKnown RBP13.93□□□□□ -0.18
MSH6-210ENST00000540021 ARHGEF18Q6ZSZ5 1173 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 MREGQ8N565 214 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 HAUS1Q96CS2 278 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 DNAJC19Q96DA6 116 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 RAB3IPQ96QF0 476 aaPredicted RBP13.93□□□□□ -0.18
MSH6-210ENST00000540021 NUP85Q9BW27 656 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 EHMT1Q9H9B1 1298 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 DONSONQ9NYP3 566 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 FAM187AA6NFU0 413 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 CA4P22748 312 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 FMO5P49326 533 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 MAPK7Q13164 816 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 COG2Q14746 738 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 CLUL1Q15846 466 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 C16orf86Q6ZW13 317 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 SPATA21Q7Z572 469 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 NT5DC3Q86UY8 548 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 CD302Q8IX05 232 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 SLC17A8Q8NDX2 589 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 TBC1D22AQ8WUA7 517 aa13.93□□□□□ -0.18
MSH6-210ENST00000540021 MTMR9Q96QG7 549 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms