RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 TRIM14Q14142 442 aa9.71□□□□□ -0.85
DDB1-213ENST00000539332 KNOP1Q1ED39 458 aaKnown RBP9.71□□□□□ -0.85
DDB1-213ENST00000539332 DUSP28Q4G0W2 176 aa9.71□□□□□ -0.85
DDB1-213ENST00000539332 IQSEC1Q6DN90 963 aa9.71□□□□□ -0.85
DDB1-213ENST00000539332 SWSAP1Q6NVH7 229 aa9.71□□□□□ -0.85
DDB1-213ENST00000539332 CCDC60Q8IWA6 550 aaPredicted RBP9.71□□□□□ -0.85
DDB1-213ENST00000539332 DNAJC5GQ8N7S2 189 aa9.71□□□□□ -0.85
DDB1-213ENST00000539332 TC2NQ8N9U0 490 aa9.71□□□□□ -0.85
DDB1-213ENST00000539332 TMEM174Q8WUU8 243 aa9.71□□□□□ -0.85
DDB1-213ENST00000539332 ATP6V0A1Q93050 837 aa9.71□□□□□ -0.85
DDB1-213ENST00000539332 CCDC97Q96F63 343 aaPredicted RBP9.71□□□□□ -0.85
DDB1-213ENST00000539332 SPATA33Q96N06 139 aa9.71□□□□□ -0.85
DDB1-213ENST00000539332 PLCD4Q9BRC7 762 aa9.71□□□□□ -0.85
DDB1-213ENST00000539332 TUBGCP2Q9BSJ2 902 aa9.71□□□□□ -0.85
DDB1-213ENST00000539332 VPS16Q9H269 839 aa9.71□□□□□ -0.85
DDB1-213ENST00000539332 ST6GALNAC4Q9H4F1 302 aa9.71□□□□□ -0.85
DDB1-213ENST00000539332 TYW1Q9NV66 732 aaKnown RBP9.71□□□□□ -0.85
DDB1-213ENST00000539332 TBC1D7Q9P0N9 293 aa9.71□□□□□ -0.85
DDB1-213ENST00000539332 GABBR1Q9UBS5 961 aa9.71□□□□□ -0.85
DDB1-213ENST00000539332 TSKSQ9UJT2 592 aa9.71□□□□□ -0.85
DDB1-213ENST00000539332 EVPLQ92817 2033 aa9.71□□□□□ -0.86
DDB1-213ENST00000539332 NOP56O00567 594 aaKnown RBP9.7□□□□□ -0.86
DDB1-213ENST00000539332 BACH1O14867 736 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 GH1P01241 217 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 TCF7P36402 384 aaPredicted RBP9.7□□□□□ -0.86
DDB1-213ENST00000539332 DNM2P50570 870 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 TNFAIP2Q03169 654 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 ALCAMQ13740 583 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 LAMC2Q13753 1193 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 MAN2A1Q16706 1144 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 ANO5Q75V66 913 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 ZNF720Q7Z2F6 126 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 SEPT1Q8WYJ6 367 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 KCNN1Q92952 543 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 EMID1Q96A84 441 aaPredicted RBP9.7□□□□□ -0.86
DDB1-213ENST00000539332 RNF25Q96BH1 459 aaPredicted RBP9.7□□□□□ -0.86
DDB1-213ENST00000539332 ERGIC2Q96RQ1 377 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 GPR20Q99678 358 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 MRPL44Q9H9J2 332 aaKnown RBP9.7□□□□□ -0.86
DDB1-213ENST00000539332 PDLIM7Q9NR12 457 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 WBP1LQ9NX94 342 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.7□□□□□ -0.868e-8■■□□□ 11.5
DDB1-213ENST00000539332 MAFBQ9Y5Q3 323 aaPredicted RBP9.7□□□□□ -0.86
DDB1-213ENST00000539332 FHOD1Q9Y613 1164 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 GOLGA6L9A6NEM1 432 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 NKRFO15226 690 aaKnown RBP eCLIP9.7□□□□□ -0.86
DDB1-213ENST00000539332 GNA14O95837 355 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 GYPCP04921 128 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 PNMA6AP0CW24 399 aaPredicted RBP9.7□□□□□ -0.86
DDB1-213ENST00000539332 ELNP15502 786 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 PRKCEQ02156 737 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 NAA30Q147X3 362 aaPredicted RBP9.7□□□□□ -0.86
DDB1-213ENST00000539332 PTPN21Q16825 1174 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 MFSD14CQ5VZR4 134 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 TRIM59Q8IWR1 403 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 NELFCDQ8IXH7 590 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 MYCT1Q8N699 235 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 PPTC7Q8NI37 304 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 AFAP1L1Q8TED9 768 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 UBXN4Q92575 508 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 DRC1Q96MC2 740 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 PANX2Q96RD6 677 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 CEP89Q96ST8 783 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 PCYT2Q99447 389 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 TTYH3Q9C0H2 523 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 ZHX3Q9H4I2 956 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 ZNF302Q9NR11 478 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 ZNF446Q9NWS9 450 aa9.7□□□□□ -0.86
DDB1-213ENST00000539332 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.7□□□□□ -0.86
DDB1-213ENST00000539332 ARIH1Q9Y4X5 557 aaPredicted RBP9.7□□□□□ -0.86
DDB1-213ENST00000539332 TMEM150BA6NC51 233 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 EFCAB8A8MWE9 144 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 TGFB1I1O43294 461 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 MFAP3LO75121 409 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 PRPF6O94906 941 aaKnown RBP9.69□□□□□ -0.86
DDB1-213ENST00000539332 ZRANB2O95218 330 aaKnown RBP eCLIP9.69□□□□□ -0.863e-9■□□□□ 8.6
DDB1-213ENST00000539332 GCNT3O95395 438 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 CYBAP13498 195 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 PLS3P13797 630 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 ATP4AP20648 1035 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 NMT1P30419 496 aaKnown RBP9.69□□□□□ -0.86
DDB1-213ENST00000539332 MTIF2P46199 727 aaKnown RBP9.69□□□□□ -0.86
DDB1-213ENST00000539332 NPEPPSP55786 919 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 RTP1P59025 263 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 UBXN1Q04323 297 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 ARHGEF6Q15052 776 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 XKR3Q5GH77 459 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 FIGNQ5HY92 759 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 ODR4Q5SWX8 454 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 PLA2G4FQ68DD2 849 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 STXBP4Q6ZWJ1 553 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 OTUD6AQ7L8S5 288 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 FAM178BQ8IXR5 827 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 TRPV1Q8NER1 839 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 AFG1LQ8WV93 481 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 CCDC51Q96ER9 411 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 PPP1R13BQ96KQ4 1090 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 C17orf75Q9HAS0 396 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 DMAC2Q9NW81 257 aa9.69□□□□□ -0.86
DDB1-213ENST00000539332 LARSQ9P2J5 1176 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms