RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 RPN1P04843 607 aaKnown RBP13.57□□□□□ -0.24
SCARB1-204ENST00000535005 COL6A1P12109 1028 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 GAP43P17677 238 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 ARL2P36404 184 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 CHMP4BP1P59074 171 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 IGBP1P78318 339 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 EHHADHQ08426 723 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 HIC1Q14526 733 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 PTPN14Q15678 1187 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 STX1AQ16623 288 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 IER5Q5VY09 327 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 LRRC8AQ8IWT6 810 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 CCDC65Q8IXS2 484 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 TCP11Q8WWU5 503 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 C17orf75Q9HAS0 396 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 STARD7Q9NQZ5 370 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 COL4A3BPQ9Y5P4 624 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 SMIM35A0A1B0GVV1 85 aa13.56□□□□□ -0.24
SCARB1-204ENST00000535005 TBCAO75347 108 aaKnown RBP13.56□□□□□ -0.24
SCARB1-204ENST00000535005 CDK7P50613 346 aa13.56□□□□□ -0.24
SCARB1-204ENST00000535005 SLC20A2Q08357 652 aa13.56□□□□□ -0.24
SCARB1-204ENST00000535005 MKRN4PQ13434 485 aaPredicted RBP13.56□□□□□ -0.24
SCARB1-204ENST00000535005 EFCAB12Q6NXP0 572 aa13.56□□□□□ -0.24
SCARB1-204ENST00000535005 CACTINQ8WUQ7 758 aaKnown RBP13.56□□□□□ -0.24
SCARB1-204ENST00000535005 CCDC47Q96A33 483 aaKnown RBP13.56□□□□□ -0.24
SCARB1-204ENST00000535005 VTI1AQ96AJ9 217 aa13.56□□□□□ -0.24
SCARB1-204ENST00000535005 TSPYL1Q9H0U9 437 aa13.56□□□□□ -0.24
SCARB1-204ENST00000535005 PANK4Q9NVE7 773 aa13.56□□□□□ -0.24
SCARB1-204ENST00000535005 RMND1Q9NWS8 449 aa13.56□□□□□ -0.24
SCARB1-204ENST00000535005 CALCOCO1Q9P1Z2 691 aa13.56□□□□□ -0.24
SCARB1-204ENST00000535005 IMPACTQ9P2X3 320 aa13.56□□□□□ -0.24
SCARB1-204ENST00000535005 SEL1LQ9UBV2 794 aa13.56□□□□□ -0.24
SCARB1-204ENST00000535005 KCNG1Q9UIX4 513 aa13.56□□□□□ -0.24
SCARB1-204ENST00000535005 KIAA0100Q14667 2235 aaKnown RBP13.56□□□□□ -0.24
SCARB1-204ENST00000535005 RSPH10B2B2RC85 870 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 ARVCFO00192 962 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 RHOBTB3O94955 611 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 FAM13AO94988 1023 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 RSPH10BP0C881 870 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 IDEP14735 1019 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 TMOD1P28289 359 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 DNM2P50570 870 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 CACNB1Q02641 598 aaPredicted RBP13.55□□□□□ -0.24
SCARB1-204ENST00000535005 RAD51AP2Q09MP3 1159 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 LRMPQ12912 555 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 PSMD2Q13200 908 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 KMT5BQ4FZB7 885 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 FAM102BQ5T8I3 360 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 GDF6Q6KF10 455 aaPredicted RBP13.55□□□□□ -0.24
SCARB1-204ENST00000535005 TRIML1Q8N9V2 468 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 ERCC4Q92889 916 aaPredicted RBP13.55□□□□□ -0.24
SCARB1-204ENST00000535005 PARVGQ9HBI0 331 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 GPRC5CQ9NQ84 441 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 ASAP2O43150 1006 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 TREHO43280 583 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 SLU7O95391 586 aaKnown RBP13.55□□□□□ -0.24
SCARB1-204ENST00000535005 PLS3P13797 630 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 COASYQ13057 564 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 FAM47CQ5HY64 1035 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 C1orf53Q5VUE5 145 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 MAEAQ7L5Y9 396 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 KIAA0319LQ8IZA0 1049 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 LRRC71Q8N4P6 559 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 PPP1R13LQ8WUF5 828 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 SPIRE2Q8WWL2 714 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 KCNN1Q92952 543 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 TMEM143Q96AN5 459 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 NTPCRQ9BSD7 190 aaKnown RBP13.55□□□□□ -0.24
SCARB1-204ENST00000535005 SUGCTQ9HAC7 445 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 OLFML3Q9NRN5 406 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 LARSQ9P2J5 1176 aaKnown RBP13.55□□□□□ -0.24
SCARB1-204ENST00000535005 MAN1B1Q9UKM7 699 aa13.55□□□□□ -0.24
SCARB1-204ENST00000535005 KAT6AQ92794 2004 aa13.54□□□□□ -0.24
SCARB1-204ENST00000535005 RPLP2P05387 115 aaKnown RBP13.54□□□□□ -0.24
SCARB1-204ENST00000535005 MAPTP10636 758 aaKnown RBP13.54□□□□□ -0.24
SCARB1-204ENST00000535005 ZNF200P98182 395 aaPredicted RBP13.54□□□□□ -0.24
SCARB1-204ENST00000535005 DRP2Q13474 957 aa13.54□□□□□ -0.24
SCARB1-204ENST00000535005 MORC3Q14149 939 aa13.54□□□□□ -0.24
SCARB1-204ENST00000535005 MXD4Q14582 209 aaPredicted RBP13.54□□□□□ -0.24
SCARB1-204ENST00000535005 IQCB1Q15051 598 aa13.54□□□□□ -0.24
SCARB1-204ENST00000535005 HERC4Q5GLZ8 1057 aaPredicted RBP13.54□□□□□ -0.24
SCARB1-204ENST00000535005 TAF2Q6P1X5 1199 aa13.54□□□□□ -0.24
SCARB1-204ENST00000535005 RPAINQ86UA6 219 aa13.54□□□□□ -0.24
SCARB1-204ENST00000535005 SERINC5Q86VE9 423 aa13.54□□□□□ -0.24
SCARB1-204ENST00000535005 NME8Q8N427 588 aa13.54□□□□□ -0.24
SCARB1-204ENST00000535005 METTL13Q8N6R0 699 aa13.54□□□□□ -0.24
SCARB1-204ENST00000535005 PRPF31Q8WWY3 499 aaKnown RBP13.54□□□□□ -0.24
SCARB1-204ENST00000535005 PSPC1Q8WXF1 523 aaKnown RBP13.54□□□□□ -0.24
SCARB1-204ENST00000535005 ZBTB10Q96DT7 871 aa13.54□□□□□ -0.24
SCARB1-204ENST00000535005 POLR3FQ9H1D9 316 aaPredicted RBP13.54□□□□□ -0.24
SCARB1-204ENST00000535005 POLD4Q9HCU8 107 aa13.54□□□□□ -0.24
SCARB1-204ENST00000535005 EXOC1Q9NV70 894 aa13.54□□□□□ -0.24
SCARB1-204ENST00000535005 SUCLA2Q9P2R7 463 aaPredicted RBP13.54□□□□□ -0.24
SCARB1-204ENST00000535005 SFI1A8K8P3 1242 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 CCP110O43303 1012 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 NRDCO43847 1150 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 CYP2C9P11712 490 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 GLRA2P23416 452 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 SOX10P56693 466 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 CDC42EP1Q00587 391 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms