RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 MPHOSPH6Q99547 160 aaKnown RBP4.49□□□□□ -1.69
CSMD3-210ENST00000534172 TMEM168Q9H0V1 697 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 SPATA6Q9NWH7 488 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-210ENST00000534172 PLA2G2DQ9UNK4 145 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 NUMBLQ9Y6R0 609 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 CREB3O43889 395 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 KDM1AO60341 852 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 PRPF6O94906 941 aaKnown RBP4.48□□□□□ -1.69
CSMD3-210ENST00000534172 KNG1P01042 644 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 PLA2G1BP04054 148 aaKnown RBP4.48□□□□□ -1.69
CSMD3-210ENST00000534172 XPAP23025 273 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-210ENST00000534172 PTX3P26022 381 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-210ENST00000534172 GLRBP48167 497 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 KRT85P78386 507 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 SMAD4Q13485 552 aaKnown RBP4.48□□□□□ -1.69
CSMD3-210ENST00000534172 HDAC1Q13547 482 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-210ENST00000534172 DGKDQ16760 1214 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 TSHZ1Q6ZSZ6 1077 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 BMP8AQ7Z5Y6 402 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 CARFQ8N187 725 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 CAMKK2Q96RR4 588 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 AMNQ9BXJ7 453 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 RHOBTB2Q9BYZ6 727 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 BARX1Q9HBU1 254 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-210ENST00000534172 EPB41L4AQ9HCS5 686 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-210ENST00000534172 SAE1Q9UBE0 346 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-210ENST00000534172 VWA7Q9Y334 891 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 COMMD10Q9Y6G5 202 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 CLSPNQ9HAW4 1339 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 KIAA0586Q9BVV6 1533 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 STRCQ7RTU9 1775 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 ABLIM3O94929 683 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 POLD1P28340 1107 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 NRG3P56975 720 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 GRAMD4Q6IC98 578 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 CXorf67Q86X51 503 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-210ENST00000534172 SIAH1Q8IUQ4 282 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 SP8Q8IXZ3 490 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 STPG3Q8N7X2 389 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 MAGEB6Q8N7X4 407 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 CLRN3Q8NCR9 226 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 MSL2Q9HCI7 577 aa4.48□□□□□ -1.69
CSMD3-210ENST00000534172 ABCC8Q09428 1581 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 A0A0G2JNJ9 132 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 GOLGA8AA7E2F4 631 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 GOLGA8BA8MQT2 603 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 PRKD3O94806 890 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 C8AP07357 584 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 ZSCAN20P17040 1043 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-210ENST00000534172 MC4RP32245 332 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 MRPS9P82933 396 aaKnown RBP4.47□□□□□ -1.69
CSMD3-210ENST00000534172 KLF1Q13351 362 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-210ENST00000534172 OS9Q13438 667 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-210ENST00000534172 VWA3BQ502W6 1294 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 TMEM200BQ69YZ2 307 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 SLC4A10Q6U841 1118 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 KSR2Q6VAB6 950 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 PLEKHH3Q7Z736 793 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 AMOTL1Q8IY63 956 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 JPH3Q8WXH2 748 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-210ENST00000534172 RTF1Q92541 710 aaKnown RBP4.47□□□□□ -1.69
CSMD3-210ENST00000534172 GFM2Q969S9 779 aaKnown RBP4.47□□□□□ -1.69
CSMD3-210ENST00000534172 EVI5LQ96CN4 794 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 AJUBAQ96IF1 538 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 HIST1H2AHQ96KK5 128 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 HIST1H2AJQ99878 128 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 TACO1Q9BSH4 297 aaKnown RBP4.47□□□□□ -1.69
CSMD3-210ENST00000534172 PITHD1Q9GZP4 211 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-210ENST00000534172 Q9UFV3 132 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 DENND2AQ9ULE3 1009 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 WASF3Q9UPY6 502 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 CEP170Q5SW79 1584 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 A0A0A6YYJ9 748 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 GOLGA6CA6NDK9 693 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 GOLGA6BA6NDN3 693 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 H2AFYO75367 372 aaKnown RBP4.47□□□□□ -1.69
CSMD3-210ENST00000534172 RFPL1O75677 317 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 IL18BPO95998 194 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 CYP1A1P04798 512 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-210ENST00000534172 GOLGA6DP0CG33 693 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 CFTRP13569 1480 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 SURF1Q15526 300 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 PTPN21Q16825 1174 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 UGT8Q16880 541 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 ABCB5Q2M3G0 1257 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 GLIPR1L2Q4G1C9 344 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 ZCCHC6Q5VYS8 1495 aaKnown RBP4.47□□□□□ -1.69
CSMD3-210ENST00000534172 KANK2Q63ZY3 851 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 BORAQ6PGQ7 559 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 FAM180AQ6UWF9 173 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 Q6ZUG5 572 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 CFAP43Q8NDM7 1665 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 YTHDC1Q96MU7 727 aaKnown RBP4.47□□□□□ -1.69
CSMD3-210ENST00000534172 OSBPL6Q9BZF3 934 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 LUC7LQ9NQ29 371 aaKnown RBP4.47□□□□□ -1.69
CSMD3-210ENST00000534172 GOLGA6AQ9NYA3 693 aa4.47□□□□□ -1.69
CSMD3-210ENST00000534172 BCORL1Q5H9F3 1711 aa4.46□□□□□ -1.7
CSMD3-210ENST00000534172 MYPNQ86TC9 1320 aa4.46□□□□□ -1.7
CSMD3-210ENST00000534172 LDHAP00338 332 aaKnown RBP4.46□□□□□ -1.7
CSMD3-210ENST00000534172 ETV4P43268 484 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms