RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 TMEM63CQ9P1W3 806 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 GINS2Q9Y248 185 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 M0QZ92 97 aa13.21□□□□□ -0.29
PVT1-215ENST00000522963 MAGEB2O15479 319 aa13.21□□□□□ -0.29
PVT1-215ENST00000522963 HIP1RO75146 1068 aa13.21□□□□□ -0.29
PVT1-215ENST00000522963 KRT18P05783 430 aaKnown RBP13.21□□□□□ -0.29
PVT1-215ENST00000522963 PFKMP08237 780 aa13.21□□□□□ -0.29
PVT1-215ENST00000522963 ASIC1P78348 528 aa13.21□□□□□ -0.29
PVT1-215ENST00000522963 MKRN4PQ13434 485 aaPredicted RBP13.21□□□□□ -0.29
PVT1-215ENST00000522963 DRP2Q13474 957 aa13.21□□□□□ -0.29
PVT1-215ENST00000522963 FAM102BQ5T8I3 360 aa13.21□□□□□ -0.29
PVT1-215ENST00000522963 CAVIN1Q6NZI2 390 aaKnown RBP13.21□□□□□ -0.29
PVT1-215ENST00000522963 EXOC8Q8IYI6 725 aa13.21□□□□□ -0.29
PVT1-215ENST00000522963 DAW1Q8N136 415 aa13.21□□□□□ -0.29
PVT1-215ENST00000522963 LRRC71Q8N4P6 559 aa13.21□□□□□ -0.29
PVT1-215ENST00000522963 LINC01465Q8N7H1 131 aa13.21□□□□□ -0.29
PVT1-215ENST00000522963 MCPH1Q8NEM0 835 aa13.21□□□□□ -0.29
PVT1-215ENST00000522963 HERVK_113Q902F9 699 aa13.21□□□□□ -0.29
PVT1-215ENST00000522963 TMEM143Q96AN5 459 aa13.21□□□□□ -0.29
PVT1-215ENST00000522963 VWCEQ96DN2 955 aa13.21□□□□□ -0.29
PVT1-215ENST00000522963 JPH2Q9BR39 696 aaPredicted RBP13.21□□□□□ -0.29
PVT1-215ENST00000522963 REEP2Q9BRK0 252 aa13.21□□□□□ -0.29
PVT1-215ENST00000522963 SUGCTQ9HAC7 445 aa13.21□□□□□ -0.29
PVT1-215ENST00000522963 CXXC1Q9P0U4 656 aaPredicted RBP13.21□□□□□ -0.29
PVT1-215ENST00000522963 PCDHA2Q9Y5H9 948 aa13.21□□□□□ -0.29
PVT1-215ENST00000522963 CDY2AQ9Y6F7 541 aa13.21□□□□□ -0.29
PVT1-215ENST00000522963 GRXCR1A8MXD5 290 aa13.2□□□□□ -0.3
PVT1-215ENST00000522963 KLRC4O43908 158 aa13.2□□□□□ -0.3
PVT1-215ENST00000522963 PARNO95453 639 aaKnown RBP13.2□□□□□ -0.3
PVT1-215ENST00000522963 MYL1P05976 194 aa13.2□□□□□ -0.3
PVT1-215ENST00000522963 GHRP10912 638 aa13.2□□□□□ -0.3
PVT1-215ENST00000522963 CLCN3P51790 818 aa13.2□□□□□ -0.3
PVT1-215ENST00000522963 MRPS6P82932 125 aaKnown RBP13.2□□□□□ -0.3
PVT1-215ENST00000522963 MBTPS1Q14703 1052 aa13.2□□□□□ -0.3
PVT1-215ENST00000522963 GPNMBQ14956 572 aa13.2□□□□□ -0.3
PVT1-215ENST00000522963 LRIT3Q3SXY7 679 aa13.2□□□□□ -0.3
PVT1-215ENST00000522963 CCDC183Q5T5S1 534 aa13.2□□□□□ -0.3
PVT1-215ENST00000522963 EFCAB12Q6NXP0 572 aa13.2□□□□□ -0.3
PVT1-215ENST00000522963 TRAF7Q6Q0C0 670 aa13.2□□□□□ -0.3
PVT1-215ENST00000522963 TIPINQ9BVW5 301 aa13.2□□□□□ -0.3
PVT1-215ENST00000522963 OSBPL7Q9BZF2 842 aa13.2□□□□□ -0.3
PVT1-215ENST00000522963 POLR3FQ9H1D9 316 aaPredicted RBP13.2□□□□□ -0.3
PVT1-215ENST00000522963 HOOK1Q9UJC3 728 aaKnown RBP13.2□□□□□ -0.3
PVT1-215ENST00000522963 ODF2LQ9ULJ1 636 aa13.2□□□□□ -0.3
PVT1-215ENST00000522963 PCDHA5Q9Y5H7 936 aa13.2□□□□□ -0.3
PVT1-215ENST00000522963 SLC4A7Q9Y6M7 1214 aa13.2□□□□□ -0.3
PVT1-215ENST00000522963 MYO9BQ13459 2157 aa13.2□□□□□ -0.3
PVT1-215ENST00000522963 SMIM35A0A1B0GVV1 85 aa13.19□□□□□ -0.3
PVT1-215ENST00000522963 FRMD3A2A2Y4 597 aa13.19□□□□□ -0.3
PVT1-215ENST00000522963 SFI1A8K8P3 1242 aa13.19□□□□□ -0.3
PVT1-215ENST00000522963 GAS2O43903 313 aaKnown RBP13.19□□□□□ -0.3
PVT1-215ENST00000522963 CAND2O75155 1236 aa13.19□□□□□ -0.3
PVT1-215ENST00000522963 FAM13AO94988 1023 aa13.19□□□□□ -0.3
PVT1-215ENST00000522963 CHRNA1P02708 482 aa13.19□□□□□ -0.3
PVT1-215ENST00000522963 RPN1P04843 607 aaKnown RBP13.19□□□□□ -0.3
PVT1-215ENST00000522963 IDEP14735 1019 aa13.19□□□□□ -0.3
PVT1-215ENST00000522963 ARL2P36404 184 aa13.19□□□□□ -0.3
PVT1-215ENST00000522963 KCNJ6P48051 423 aa13.19□□□□□ -0.3
PVT1-215ENST00000522963 TCTN1Q2MV58 587 aa13.19□□□□□ -0.3
PVT1-215ENST00000522963 IER5Q5VY09 327 aa13.19□□□□□ -0.3
PVT1-215ENST00000522963 FAM109BQ6ICB4 259 aaPredicted RBP13.19□□□□□ -0.3
PVT1-215ENST00000522963 CNKSR3Q6P9H4 555 aa13.19□□□□□ -0.3
PVT1-215ENST00000522963 UNC13DQ70J99 1090 aa13.19□□□□□ -0.3
PVT1-215ENST00000522963 KIAA0319LQ8IZA0 1049 aa13.19□□□□□ -0.3
PVT1-215ENST00000522963 DBF4BQ8NFT6 615 aa13.19□□□□□ -0.3
PVT1-215ENST00000522963 ASAP3Q8TDY4 903 aa13.19□□□□□ -0.3
PVT1-215ENST00000522963 ZNF668Q96K58 619 aaPredicted RBP13.19□□□□□ -0.3
PVT1-215ENST00000522963 ZHX3Q9H4I2 956 aa13.19□□□□□ -0.3
PVT1-215ENST00000522963 PANK4Q9NVE7 773 aa13.19□□□□□ -0.3
PVT1-215ENST00000522963 AKT3Q9Y243 479 aa13.19□□□□□ -0.3
PVT1-215ENST00000522963 TRPV2Q9Y5S1 764 aa13.19□□□□□ -0.3
PVT1-215ENST00000522963 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.18□□□□□ -0.3
PVT1-215ENST00000522963 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.18□□□□□ -0.3
PVT1-215ENST00000522963 PVALEFA0A1B0GWK0 134 aa13.18□□□□□ -0.3
PVT1-215ENST00000522963 TBCAO75347 108 aaKnown RBP13.18□□□□□ -0.3
PVT1-215ENST00000522963 SMC2O95347 1197 aa13.18□□□□□ -0.3
PVT1-215ENST00000522963 CXCL10P02778 98 aa13.18□□□□□ -0.3
PVT1-215ENST00000522963 VTNP04004 478 aa13.18□□□□□ -0.3
PVT1-215ENST00000522963 GLRA2P23416 452 aa13.18□□□□□ -0.3
PVT1-215ENST00000522963 SARSP49591 514 aaKnown RBP13.18□□□□□ -0.3
PVT1-215ENST00000522963 DNM2P50570 870 aa13.18□□□□□ -0.3
PVT1-215ENST00000522963 ZNF131P52739 623 aa13.18□□□□□ -0.3
PVT1-215ENST00000522963 COASYQ13057 564 aa13.18□□□□□ -0.3
PVT1-215ENST00000522963 KMT5BQ4FZB7 885 aa13.18□□□□□ -0.3
PVT1-215ENST00000522963 RBM43Q6ZSC3 357 aaKnown RBP13.18□□□□□ -0.3
PVT1-215ENST00000522963 CCDC65Q8IXS2 484 aa13.18□□□□□ -0.3
PVT1-215ENST00000522963 SPATA20Q8TB22 786 aa13.18□□□□□ -0.3
PVT1-215ENST00000522963 TCP11Q8WWU5 503 aa13.18□□□□□ -0.3
PVT1-215ENST00000522963 PRPF31Q8WWY3 499 aaKnown RBP13.18□□□□□ -0.3
PVT1-215ENST00000522963 BSNDQ8WZ55 320 aa13.18□□□□□ -0.3
PVT1-215ENST00000522963 SEPT8Q92599 483 aa13.18□□□□□ -0.3
PVT1-215ENST00000522963 KIFAP3Q92845 792 aa13.18□□□□□ -0.3
PVT1-215ENST00000522963 SMARCE1Q969G3 411 aa13.18□□□□□ -0.3
PVT1-215ENST00000522963 SYAP1Q96A49 352 aaPredicted RBP13.18□□□□□ -0.3
PVT1-215ENST00000522963 DRC1Q96MC2 740 aa13.18□□□□□ -0.3
PVT1-215ENST00000522963 SCLT1Q96NL6 688 aa13.18□□□□□ -0.3
PVT1-215ENST00000522963 MAP7D2Q96T17 732 aa13.18□□□□□ -0.3
PVT1-215ENST00000522963 KIAA1468Q9P260 1216 aa13.18□□□□□ -0.3
PVT1-215ENST00000522963 SUCLA2Q9P2R7 463 aaPredicted RBP13.18□□□□□ -0.3
PVT1-215ENST00000522963 SIP14410 1827 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms