RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 PCIF1Q9H4Z3 704 aa18.08■□□□□ 0.48
ATG4B-225ENST00000494465 EFCC1Q9HA90 598 aa18.08■□□□□ 0.48
ATG4B-225ENST00000494465 ATP6V0A4Q9HBG4 840 aa18.08■□□□□ 0.48
ATG4B-225ENST00000494465 DDX41Q9UJV9 622 aaKnown RBP18.08■□□□□ 0.48
ATG4B-225ENST00000494465 PLXNB2O15031 1838 aa18.07■□□□□ 0.48
ATG4B-225ENST00000494465 BTBD19C9JJ37 291 aa18.07■□□□□ 0.48
ATG4B-225ENST00000494465 URI1O94763 535 aaPredicted RBP18.07■□□□□ 0.48
ATG4B-225ENST00000494465 SLU7O95391 586 aaKnown RBP18.07■□□□□ 0.48
ATG4B-225ENST00000494465 GGPS1O95749 300 aa18.07■□□□□ 0.48
ATG4B-225ENST00000494465 UCHL3P15374 230 aa18.07■□□□□ 0.48
ATG4B-225ENST00000494465 FMO5P49326 533 aa18.07■□□□□ 0.48
ATG4B-225ENST00000494465 KIF11P52732 1056 aa18.07■□□□□ 0.48
ATG4B-225ENST00000494465 SMTNP53814 917 aa18.07■□□□□ 0.48
ATG4B-225ENST00000494465 SNRPFP62306 86 aaKnown RBP18.07■□□□□ 0.48
ATG4B-225ENST00000494465 BFSP1Q12934 665 aa18.07■□□□□ 0.48
ATG4B-225ENST00000494465 MTERF2Q49AM1 385 aa18.07■□□□□ 0.48
ATG4B-225ENST00000494465 ZNF569Q5MCW4 686 aa18.07■□□□□ 0.48
ATG4B-225ENST00000494465 SFMBT2Q5VUG0 894 aa18.07■□□□□ 0.48
ATG4B-225ENST00000494465 METTL7BQ6UX53 244 aa18.07■□□□□ 0.48
ATG4B-225ENST00000494465 GBP6Q6ZN66 633 aa18.07■□□□□ 0.48
ATG4B-225ENST00000494465 MAP4K3Q8IVH8 894 aa18.07■□□□□ 0.48
ATG4B-225ENST00000494465 ZSWIM2Q8NEG5 633 aa18.07■□□□□ 0.48
ATG4B-225ENST00000494465 HVCN1Q96D96 273 aa18.07■□□□□ 0.48
ATG4B-225ENST00000494465 LACRTQ9GZZ8 138 aa18.07■□□□□ 0.48
ATG4B-225ENST00000494465 HAUS4Q9H6D7 363 aa18.07■□□□□ 0.48
ATG4B-225ENST00000494465 KMT5AQ9NQR1 393 aa18.07■□□□□ 0.48
ATG4B-225ENST00000494465 AIPL1Q9NZN9 384 aa18.07■□□□□ 0.48
ATG4B-225ENST00000494465 GCNT4Q9P109 453 aa18.07■□□□□ 0.48
ATG4B-225ENST00000494465 PDHXO00330 501 aa18.06■□□□□ 0.48
ATG4B-225ENST00000494465 TRIM49P0CI25 452 aa18.06■□□□□ 0.48
ATG4B-225ENST00000494465 TRIM49CP0CI26 452 aa18.06■□□□□ 0.48
ATG4B-225ENST00000494465 CETPP11597 493 aa18.06■□□□□ 0.48
ATG4B-225ENST00000494465 FKBP1BP68106 108 aa18.06■□□□□ 0.48
ATG4B-225ENST00000494465 NAA30Q147X3 362 aaPredicted RBP18.06■□□□□ 0.48
ATG4B-225ENST00000494465 CBWD6Q4V339 395 aa18.06■□□□□ 0.48
ATG4B-225ENST00000494465 CBWD3Q5JTY5 395 aa18.06■□□□□ 0.48
ATG4B-225ENST00000494465 CBWD5Q5RIA9 395 aa18.06■□□□□ 0.48
ATG4B-225ENST00000494465 LRRN4CLQ8ND94 238 aa18.06■□□□□ 0.48
ATG4B-225ENST00000494465 BRI3BPQ8WY22 251 aa18.06■□□□□ 0.48
ATG4B-225ENST00000494465 NIFKQ9BYG3 293 aaKnown RBP18.06■□□□□ 0.48
ATG4B-225ENST00000494465 HSPBP1Q9NZL4 362 aa18.06■□□□□ 0.48
ATG4B-225ENST00000494465 FBXL5Q9UKA1 691 aa18.06■□□□□ 0.48
ATG4B-225ENST00000494465 SLC45A1Q9Y2W3 748 aa18.06■□□□□ 0.48
ATG4B-225ENST00000494465 FHOD1Q9Y613 1164 aa18.06■□□□□ 0.48
ATG4B-225ENST00000494465 SSU72P8A0A1W2PR75 194 aa18.06■□□□□ 0.48
ATG4B-225ENST00000494465 DENND3A2RUS2 1198 aa18.06■□□□□ 0.48
ATG4B-225ENST00000494465 ANKRD63C9JTQ0 380 aa18.06■□□□□ 0.48
ATG4B-225ENST00000494465 ADSSP30520 456 aa18.06■□□□□ 0.48
ATG4B-225ENST00000494465 MKRN3Q13064 507 aaKnown RBP18.06■□□□□ 0.48
ATG4B-225ENST00000494465 SLC35F6Q8N357 371 aa18.06■□□□□ 0.48
ATG4B-225ENST00000494465 RDH13Q8NBN7 331 aa18.06■□□□□ 0.48
ATG4B-225ENST00000494465 GTF3C2Q8WUA4 911 aaPredicted RBP18.06■□□□□ 0.48
ATG4B-225ENST00000494465 DHX33Q9H6R0 707 aaKnown RBP18.06■□□□□ 0.48
ATG4B-225ENST00000494465 GBA2Q9HCG7 927 aaPredicted RBP18.06■□□□□ 0.48
ATG4B-225ENST00000494465 MYO1AQ9UBC5 1043 aa18.06■□□□□ 0.48
ATG4B-225ENST00000494465 AJAP1Q9UKB5 411 aaPredicted RBP18.06■□□□□ 0.48
ATG4B-225ENST00000494465 CCL15-CCL14A0A0B4J2E2 113 aa18.05■□□□□ 0.48
ATG4B-225ENST00000494465 GTF2A2P52657 109 aa18.05■□□□□ 0.48
ATG4B-225ENST00000494465 EMC2Q15006 297 aa18.05■□□□□ 0.48
ATG4B-225ENST00000494465 CCL15Q16663 113 aa18.05■□□□□ 0.48
ATG4B-225ENST00000494465 WDR78Q5VTH9 848 aa18.05■□□□□ 0.48
ATG4B-225ENST00000494465 ZNF710Q8N1W2 664 aa18.05■□□□□ 0.48
ATG4B-225ENST00000494465 AFAP1L1Q8TED9 768 aa18.05■□□□□ 0.48
ATG4B-225ENST00000494465 MPHOSPH6Q99547 160 aaKnown RBP18.05■□□□□ 0.48
ATG4B-225ENST00000494465 POLR3FQ9H1D9 316 aaPredicted RBP18.05■□□□□ 0.48
ATG4B-225ENST00000494465 RRAGCQ9HB90 399 aa18.05■□□□□ 0.48
ATG4B-225ENST00000494465 SIP14410 1827 aa18.05■□□□□ 0.48
ATG4B-225ENST00000494465 SERPING1P05155 500 aa18.05■□□□□ 0.48
ATG4B-225ENST00000494465 TCF7P36402 384 aaPredicted RBP18.05■□□□□ 0.48
ATG4B-225ENST00000494465 MCCD1P59942 119 aaPredicted RBP18.05■□□□□ 0.48
ATG4B-225ENST00000494465 TARBP2Q15633 366 aaKnown RBP18.05■□□□□ 0.48
ATG4B-225ENST00000494465 SLC39A4Q6P5W5 647 aa18.05■□□□□ 0.48
ATG4B-225ENST00000494465 CCDC62Q6P9F0 684 aa18.05■□□□□ 0.48
ATG4B-225ENST00000494465 TAS1R3Q7RTX0 852 aa18.05■□□□□ 0.48
ATG4B-225ENST00000494465 FBXO16Q8IX29 292 aaPredicted RBP18.05■□□□□ 0.48
ATG4B-225ENST00000494465 XXYLT1Q8NBI6 393 aa18.05■□□□□ 0.48
ATG4B-225ENST00000494465 GPRC5AQ8NFJ5 357 aa18.05■□□□□ 0.48
ATG4B-225ENST00000494465 GUCA1BQ9UMX6 200 aa18.05■□□□□ 0.48
ATG4B-225ENST00000494465 MAPK13O15264 365 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 VAV2P52735 878 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 DLG4P78352 724 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 NCBP1Q09161 790 aaKnown RBP18.04■□□□□ 0.48
ATG4B-225ENST00000494465 RAPGEF1Q13905 1077 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 C1orf220Q5T0J3 134 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 CCDC122Q5T0U0 273 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 KIAA1328Q86T90 577 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 PLEKHO2Q8TD55 490 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 SEPT1Q8WYJ6 367 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 JAKMIP2Q96AA8 810 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 ERO1AQ96HE7 468 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 ARHGAP28Q9P2N2 729 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 EXOC7Q9UPT5 735 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 MRFAP1Q9Y605 127 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 LOC102724159A0A0B4J2E5 919 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 IPO7O95373 1038 aaKnown RBP18.04■□□□□ 0.48
ATG4B-225ENST00000494465 CNGA1P29973 690 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 STAT5BP51692 787 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 POLGP54098 1239 aaPredicted RBP18.04■□□□□ 0.48
ATG4B-225ENST00000494465 JAM2P57087 298 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 PWP2Q15269 919 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms