RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 C12orf56Q8IXR9 622 aa12.47□□□□□ -0.41
RFC4-214ENST00000494047 C10orf67Q8IYJ2 551 aa12.47□□□□□ -0.41
RFC4-214ENST00000494047 CERS5Q8N5B7 392 aa12.47□□□□□ -0.41
RFC4-214ENST00000494047 UBL4BQ8N7F7 174 aa12.47□□□□□ -0.41
RFC4-214ENST00000494047 HES6Q96HZ4 224 aa12.47□□□□□ -0.41
RFC4-214ENST00000494047 ZBED3Q96IU2 234 aaPredicted RBP12.47□□□□□ -0.41
RFC4-214ENST00000494047 TACO1Q9BSH4 297 aaKnown RBP12.47□□□□□ -0.41
RFC4-214ENST00000494047 DEFB129Q9H1M3 183 aa12.47□□□□□ -0.41
RFC4-214ENST00000494047 VAV3Q9UKW4 847 aa12.47□□□□□ -0.41
RFC4-214ENST00000494047 NFU1Q9UMS0 254 aa12.47□□□□□ -0.41
RFC4-214ENST00000494047 TFR2Q9UP52 801 aa12.47□□□□□ -0.41
RFC4-214ENST00000494047 ASTN1O14525 1302 aa12.47□□□□□ -0.41
RFC4-214ENST00000494047 GRIN2DO15399 1336 aa12.47□□□□□ -0.41
RFC4-214ENST00000494047 ANKRD62A6NC57 917 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 USP17L15C9J2P7 530 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 USP17L13C9JLJ4 530 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 USP17L11C9JVI0 530 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 USP17L18D6R9N7 530 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 USP17L22D6RA61 530 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 USP17L17D6RBQ6 530 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 USP17L19D6RCP7 530 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 USP17L20D6RJB6 530 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 F5H6K3 240 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 KRIT1O00522 736 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 SPATA31C1P0DKV0 1188 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 CXCR5P32302 372 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 VEGFBP49765 207 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 KLRC3Q07444 240 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 USP17L24Q0WX57 530 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 IKQ13123 557 aaPredicted RBP12.46□□□□□ -0.41
RFC4-214ENST00000494047 NBPF9Q3BBW0 867 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 TTBK2Q6IQ55 1244 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 PPP1R2P3Q6NXS1 205 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 USP17L6PQ6QN14 398 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 ZNF571Q7Z3V5 609 aaPredicted RBP12.46□□□□□ -0.41
RFC4-214ENST00000494047 LENG9Q96B70 501 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 HVCN1Q96D96 273 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 RIT2Q99578 217 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 EIF2AK1Q9BQI3 630 aaKnown RBP12.46□□□□□ -0.41
RFC4-214ENST00000494047 ZNF408Q9H9D4 720 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 ACTR5Q9H9F9 607 aaPredicted RBP12.46□□□□□ -0.41
RFC4-214ENST00000494047 GBA2Q9HCG7 927 aaPredicted RBP12.46□□□□□ -0.41
RFC4-214ENST00000494047 APEX2Q9UBZ4 518 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 KCNG1Q9UIX4 513 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 SALL4Q9UJQ4 1053 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 NOC2LQ9Y3T9 749 aaKnown RBP12.46□□□□□ -0.41
RFC4-214ENST00000494047 PPP2R3BQ9Y5P8 575 aa12.46□□□□□ -0.41
RFC4-214ENST00000494047 GOLGA6L7A0A1B0GV03 622 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 TMCO5BA8MYB1 307 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 F8VZ95 297 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 PODXLO00592 558 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 MSH4O15457 936 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 RAD51CO43502 376 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 NCK2O43639 380 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 CEP104O60308 925 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 ZMYND10O75800 440 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 FTCDO95954 541 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 FAM107AO95990 144 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 GLI1P08151 1106 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 PAEPP09466 180 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 POLR2MP0CAP2 368 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 MAN1A1P33908 653 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 NF2P35240 595 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 MAP2K2P36507 400 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 FMO5P49326 533 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 MAP2K1Q02750 393 aaPredicted RBP12.45□□□□□ -0.42
RFC4-214ENST00000494047 PABPC4Q13310 644 aaKnown RBP eCLIP12.45□□□□□ -0.42
RFC4-214ENST00000494047 LRCH2Q5VUJ6 765 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 CEP128Q6ZU80 1094 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 DAAM2Q86T65 1068 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 SUGP1Q8IWZ8 645 aaKnown RBP12.45□□□□□ -0.42
RFC4-214ENST00000494047 FAM178BQ8IXR5 827 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 MAIP1Q8WWC4 291 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 IFT81Q8WYA0 676 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 SLC5A5Q92911 643 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 HSD17B14Q9BPX1 270 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 BHMT2Q9H2M3 363 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 GINM1Q9NU53 330 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 LARSQ9P2J5 1176 aaKnown RBP12.45□□□□□ -0.42
RFC4-214ENST00000494047 USP20Q9Y2K6 914 aa12.45□□□□□ -0.42
RFC4-214ENST00000494047 SPDYE2BA6NHP3 402 aa12.44□□□□□ -0.42
RFC4-214ENST00000494047 ADM5C9JUS6 153 aa12.44□□□□□ -0.42
RFC4-214ENST00000494047 AKAP3O75969 853 aa12.44□□□□□ -0.42
RFC4-214ENST00000494047 SPDYE6P0CI01 402 aa12.44□□□□□ -0.42
RFC4-214ENST00000494047 INPP5BP32019 993 aa12.44□□□□□ -0.42
RFC4-214ENST00000494047 CHRNA3P32297 505 aa12.44□□□□□ -0.42
RFC4-214ENST00000494047 CTNNA1P35221 906 aaKnown RBP12.44□□□□□ -0.42
RFC4-214ENST00000494047 SLC16A2P36021 539 aa12.44□□□□□ -0.42
RFC4-214ENST00000494047 MDH1P40925 334 aaKnown RBP12.44□□□□□ -0.42
RFC4-214ENST00000494047 CARSP49589 748 aaKnown RBP12.44□□□□□ -0.42
RFC4-214ENST00000494047 PTENP60484 403 aa12.44□□□□□ -0.42
RFC4-214ENST00000494047 SLC7A5Q01650 507 aa12.44□□□□□ -0.42
RFC4-214ENST00000494047 TNFAIP1Q13829 316 aa12.44□□□□□ -0.42
RFC4-214ENST00000494047 TTMPQ5BVD1 217 aa12.44□□□□□ -0.42
RFC4-214ENST00000494047 RINT1Q6NUQ1 792 aa12.44□□□□□ -0.42
RFC4-214ENST00000494047 GSPT2Q8IYD1 628 aaKnown RBP12.44□□□□□ -0.42
RFC4-214ENST00000494047 ANKRD13CQ8N6S4 541 aa12.44□□□□□ -0.42
RFC4-214ENST00000494047 HDAC7Q8WUI4 952 aa12.44□□□□□ -0.42
RFC4-214ENST00000494047 CASKIN2Q8WXE0 1202 aa12.44□□□□□ -0.42
RFC4-214ENST00000494047 CENPTQ96BT3 561 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms