RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 PPME1Q9Y570 386 aa10.01□□□□□ -0.81
SMARCC1-208ENST00000492896 EPN1Q9Y6I3 576 aaPredicted RBP10.01□□□□□ -0.81
SMARCC1-208ENST00000492896 MGAMO43451 1857 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 UQCRHLA0A096LP55 91 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 DENND3A2RUS2 1198 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 GTPBP10A4D1E9 387 aaKnown RBP10□□□□□ -0.81
SMARCC1-208ENST00000492896 LRRC53A6NM62 1247 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 STRNO43815 780 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 LGR5O75473 907 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 NDUFA10O95299 355 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 IPO7O95373 1038 aaKnown RBP10□□□□□ -0.81
SMARCC1-208ENST00000492896 UQCRHP07919 91 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 KRT13P13646 458 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 STAT5BP51692 787 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 SOX10P56693 466 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 HUNKP57058 714 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 EXOC3L4Q17RC7 722 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 FAM110CQ1W6H9 321 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 CCDC62Q6P9F0 684 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 SYT10Q6XYQ8 523 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 RRAGAQ7L523 313 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 ZNF467Q7Z7K2 595 aaPredicted RBP10□□□□□ -0.81
SMARCC1-208ENST00000492896 RASAL3Q86YV0 1011 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 DHX37Q8IY37 1157 aaKnown RBP10□□□□□ -0.81
SMARCC1-208ENST00000492896 CCDC170Q8IYT3 715 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 SCFD2Q8WU76 684 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 SLC7A3Q8WY07 619 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 GPR20Q99678 358 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 CRACR2AQ9BSW2 395 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 KIFC3Q9BVG8 833 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 GANQ9H2C0 597 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 DHX33Q9H6R0 707 aaKnown RBP10□□□□□ -0.81
SMARCC1-208ENST00000492896 VTA1Q9NP79 307 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 PLCB1Q9NQ66 1216 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 HSPBP1Q9NZL4 362 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 TBX20Q9UMR3 447 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 EVPLQ92817 2033 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 EMSYQ7Z589 1322 aa10□□□□□ -0.81
SMARCC1-208ENST00000492896 DOCK3Q8IZD9 2030 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 KAT6AQ92794 2004 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 DCAF8L1A6NGE4 600 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 MANSC4A6NHS7 340 aaPredicted RBP9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 RIOK3O14730 519 aaKnown RBP9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 MAPK13O15264 365 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 N4BP1O75113 896 aaKnown RBP9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 NOL4O94818 638 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 TXNP10599 105 aaKnown RBP9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 SCP2P22307 547 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 MAPK4P31152 587 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 NAMPTP43490 491 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 POLR2FP61218 127 aaKnown RBP9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 KRT83P78385 493 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 MYL7Q01449 175 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 BFSP1Q12934 665 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 GRB14Q14449 540 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 TARBP2Q15633 366 aaKnown RBP9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 ARHGAP29Q52LW3 1261 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 SFMBT2Q5VUG0 894 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 CST9Q5W186 159 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 TRIM65Q6PJ69 517 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 INTS8Q75QN2 995 aaKnown RBP9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 GPR142Q7Z601 462 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 PLEKHH3Q7Z736 793 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 XXYLT1Q8NBI6 393 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 SYN2Q92777 582 aaPredicted RBP9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 GLG1Q92896 1179 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 SPATA33Q96N06 139 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 CBWD1Q9BRT8 395 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 NTPCRQ9BSD7 190 aaKnown RBP9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 NHEJ1Q9H9Q4 299 aaPredicted RBP9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 ZCCHC17Q9NP64 241 aaKnown RBP9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 NLRC4Q9NPP4 1024 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 GCNT4Q9P109 453 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 ARHGAP28Q9P2N2 729 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 DNAI1Q9UI46 699 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 PLAGL2Q9UPG8 496 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 DIS3Q9Y2L1 958 aaKnown RBP9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 ADGRA3Q8IWK6 1321 aa9.99□□□□□ -0.81
SMARCC1-208ENST00000492896 EIF3CLB5ME19 914 aaKnown RBP9.98□□□□□ -0.81
SMARCC1-208ENST00000492896 TISP43B9A030 160 aa9.98□□□□□ -0.81
SMARCC1-208ENST00000492896 GAS2O43903 313 aaKnown RBP9.98□□□□□ -0.81
SMARCC1-208ENST00000492896 KIF5CO60282 957 aa9.98□□□□□ -0.81
SMARCC1-208ENST00000492896 ITGBL1O95965 494 aaPredicted RBP9.98□□□□□ -0.81
SMARCC1-208ENST00000492896 TRIM49P0CI25 452 aa9.98□□□□□ -0.81
SMARCC1-208ENST00000492896 TRIM49CP0CI26 452 aa9.98□□□□□ -0.81
SMARCC1-208ENST00000492896 PON1P27169 355 aa9.98□□□□□ -0.81
SMARCC1-208ENST00000492896 MARK3P27448 753 aa9.98□□□□□ -0.81
SMARCC1-208ENST00000492896 ARL2P36404 184 aa9.98□□□□□ -0.81
SMARCC1-208ENST00000492896 FMO5P49326 533 aa9.98□□□□□ -0.81
SMARCC1-208ENST00000492896 SLC26A2P50443 739 aa9.98□□□□□ -0.81
SMARCC1-208ENST00000492896 GNG11P61952 73 aa9.98□□□□□ -0.81
SMARCC1-208ENST00000492896 ASIC2Q16515 512 aa9.98□□□□□ -0.81
SMARCC1-208ENST00000492896 HSDL1Q3SXM5 330 aa9.98□□□□□ -0.81
SMARCC1-208ENST00000492896 PLPPR4Q7Z2D5 763 aa9.98□□□□□ -0.81
SMARCC1-208ENST00000492896 KIAA1328Q86T90 577 aa9.98□□□□□ -0.81
SMARCC1-208ENST00000492896 DEPTORQ8TB45 409 aa9.98□□□□□ -0.81
SMARCC1-208ENST00000492896 ASAP3Q8TDY4 903 aa9.98□□□□□ -0.81
SMARCC1-208ENST00000492896 ATP8B4Q8TF62 1192 aa9.98□□□□□ -0.81
SMARCC1-208ENST00000492896 BBXQ8WY36 941 aaPredicted RBP9.98□□□□□ -0.81
SMARCC1-208ENST00000492896 COPS5Q92905 334 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms