RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 MMTAG2Q9BU76 263 aaKnown RBP7.94□□□□□ -1.14
NPHP3-208ENST00000490993 POLR3FQ9H1D9 316 aaPredicted RBP7.94□□□□□ -1.14
NPHP3-208ENST00000490993 ZNF408Q9H9D4 720 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.94□□□□□ -1.14
NPHP3-208ENST00000490993 GOLGA8IPA6NC78 632 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 GOLGA8JA6NMD2 632 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 MYO1FO00160 1098 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 KRT19P08727 400 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 GCLMP48507 274 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 CASP8Q14790 479 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 TRIM65Q6PJ69 517 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 TAAR1Q96RJ0 339 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 MAK16Q9BXY0 300 aaKnown RBP7.94□□□□□ -1.14
NPHP3-208ENST00000490993 IRX2Q9BZI1 471 aaPredicted RBP7.94□□□□□ -1.14
NPHP3-208ENST00000490993 AGO4Q9HCK5 861 aaKnown RBP7.94□□□□□ -1.14
NPHP3-208ENST00000490993 FBXO28Q9NVF7 368 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 EMSYQ7Z589 1322 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 NHSQ6T4R5 1651 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 ATRNL1Q5VV63 1379 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 THAP12O43422 761 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 SLC25A27O95847 323 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 ATP2A2P16615 1042 aaKnown RBP7.93□□□□□ -1.14
NPHP3-208ENST00000490993 TBXAS1P24557 533 aaPredicted RBP7.93□□□□□ -1.14
NPHP3-208ENST00000490993 RFC5P40937 340 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 EFNA5P52803 228 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 SLC8A3P57103 927 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 C4orf19Q8IY42 314 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.93□□□□□ -1.14
NPHP3-208ENST00000490993 RFFLQ8WZ73 363 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 NUDT12Q9BQG2 462 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 RAB20Q9NX57 234 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 AGTPBP1Q9UPW5 1226 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 SCN7AQ01118 1682 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 EBAG9O00559 213 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 MYBL1P10243 752 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 ARP10275 920 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 CD19P15391 556 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 ATF7P17544 494 aaPredicted RBP7.93□□□□□ -1.14
NPHP3-208ENST00000490993 VCAM1P19320 739 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 MAP2K1Q02750 393 aaPredicted RBP7.93□□□□□ -1.14
NPHP3-208ENST00000490993 ZNF662Q6ZS27 426 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 SAMD7Q7Z3H4 446 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 IPO4Q8TEX9 1081 aaKnown RBP7.93□□□□□ -1.14
NPHP3-208ENST00000490993 ATG4CQ96DT6 458 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 MAF1Q9H063 256 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 AGPAT3Q9NRZ7 376 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 HOMER3Q9NSC5 361 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 PASKQ96RG2 1323 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 SRGAP2O75044 1071 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 MAPK4P31152 587 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 CXCR5P32302 372 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 LMNB2Q03252 620 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 MESDQ14696 234 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 ZNF720Q7Z2F6 126 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 FBXL13Q8NEE6 735 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 SYTL5Q8TDW5 730 aaPredicted RBP7.93□□□□□ -1.14
NPHP3-208ENST00000490993 SLC10A4Q96EP9 437 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 EPB41L5Q9HCM4 733 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 GGA3Q9NZ52 723 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 FRMPD4Q14CM0 1322 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 NRAPQ86VF7 1730 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 ARAP2Q8WZ64 1704 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 MED7O43513 233 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 NAA30Q147X3 362 aaPredicted RBP7.93□□□□□ -1.14
NPHP3-208ENST00000490993 HADHQ16836 314 aaKnown RBP7.93□□□□□ -1.14
NPHP3-208ENST00000490993 PAPD7Q5XG87 772 aaKnown RBP7.93□□□□□ -1.14
NPHP3-208ENST00000490993 DEFB132Q7Z7B7 95 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 ETNPPLQ8TBG4 499 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.93□□□□□ -1.14
NPHP3-208ENST00000490993 HNRNPLLQ8WVV9 542 aaKnown RBP7.93□□□□□ -1.14
NPHP3-208ENST00000490993 DNAJC19Q96DA6 116 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 AGPAT1Q99943 283 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 ASIC3Q9UHC3 531 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 SCINQ9Y6U3 715 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 SYNGAP1Q96PV0 1343 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 SHANK3Q9BYB0 1731 aa7.93□□□□□ -1.14
NPHP3-208ENST00000490993 ASB14A6NK59 587 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 SLITRK3O94933 977 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 TRIM6Q9C030 488 aaPredicted RBP7.92□□□□□ -1.14
NPHP3-208ENST00000490993 PXMP2Q9NR77 195 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 HDAC6Q9UBN7 1215 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 IKBKGQ9Y6K9 419 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 IRS2Q9Y4H2 1338 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 BTAF1O14981 1849 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 CCDC88AQ3V6T2 1871 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 PPP1R11O60927 126 aaPredicted RBP7.92□□□□□ -1.14
NPHP3-208ENST00000490993 TRIM49P0CI25 452 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 TRIM49CP0CI26 452 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 CTNNA1P35221 906 aaKnown RBP7.92□□□□□ -1.14
NPHP3-208ENST00000490993 TNFAIP2Q03169 654 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 TTLL4Q14679 1199 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 ZC2HC1CQ53FD0 456 aaPredicted RBP7.92□□□□□ -1.14
NPHP3-208ENST00000490993 DENND2CQ68D51 928 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 TRIM72Q6ZMU5 477 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 B4GALNT4Q76KP1 1039 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 TRAPPC11Q7Z392 1133 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 CCDC91Q7Z6B0 441 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 RPUSD2Q8IZ73 545 aaKnown RBP7.92□□□□□ -1.14
NPHP3-208ENST00000490993 EXOC4Q96A65 974 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 POLD4Q9HCU8 107 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms