RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 RASA4O43374 803 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 CTNND1O60716 968 aaKnown RBP4.1□□□□□ -1.75
PRPF4-203ENST00000488937 HIP1RO75146 1068 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 FBLN1P23142 703 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 RRM1P23921 792 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 CTSKP43235 329 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 MECP2P51608 486 aaKnown RBP4.1□□□□□ -1.75
PRPF4-203ENST00000488937 SEMA5AQ13591 1074 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 FHL2Q14192 279 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 LRRC32Q14392 662 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 CDSNQ15517 529 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 ALDH1L2Q3SY69 923 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 ATAT1Q5SQI0 421 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 SLC35F1Q5T1Q4 408 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 INTS11Q5TA45 600 aaKnown RBP4.1□□□□□ -1.75
PRPF4-203ENST00000488937 TDRD10Q5VZ19 366 aaKnown RBP4.1□□□□□ -1.75
PRPF4-203ENST00000488937 DCAF15Q66K64 600 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 GPR155Q7Z3F1 870 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 ANKRD23Q86SG2 305 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 SLCO6A1Q86UG4 719 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 PNMA8AQ86V59 439 aaPredicted RBP4.1□□□□□ -1.75
PRPF4-203ENST00000488937 MYLK4Q86YV6 388 aaPredicted RBP4.1□□□□□ -1.75
PRPF4-203ENST00000488937 CCDC144CPQ8IYA2 1237 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 SPATA5Q8NB90 893 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 NAXEQ8NCW5 288 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 GIMAP8Q8ND71 665 aaPredicted RBP4.1□□□□□ -1.75
PRPF4-203ENST00000488937 GCC1Q96CN9 775 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 CRB3Q9BUF7 120 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 SMOC1Q9H4F8 434 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 CHST7Q9NS84 486 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 C14orf119Q9NWQ9 140 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 NTMQ9P121 344 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 B4GALT6Q9UBX8 382 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 EVLQ9UI08 416 aaPredicted RBP4.1□□□□□ -1.75
PRPF4-203ENST00000488937 LRRFIP2Q9Y608 721 aaKnown RBP4.1□□□□□ -1.75
PRPF4-203ENST00000488937 WASHC2AQ641Q2 1341 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 A0A1B0GTL3 188 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 A0A1W2PQJ5 194 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 ARVCFO00192 962 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 SRGAP3O43295 1099 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 FIBPO43427 364 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 AP1G1O43747 822 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 IL33O95760 270 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 ONECUT2O95948 504 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 SOD2P04179 222 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 TP53P04637 393 aaPredicted RBP4.09□□□□□ -1.75
PRPF4-203ENST00000488937 CYBBP04839 570 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 NCAM1P13591 858 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 ATP2A2P16615 1042 aaKnown RBP4.09□□□□□ -1.75
PRPF4-203ENST00000488937 CD247P20963 164 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 BMP8BP34820 402 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 IL6STP40189 918 aaPredicted RBP4.09□□□□□ -1.75
PRPF4-203ENST00000488937 OCRLQ01968 901 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 BTKQ06187 659 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 CNGB1Q14028 1251 aaPredicted RBP4.09□□□□□ -1.75
PRPF4-203ENST00000488937 SART3Q15020 963 aaKnown RBP4.09□□□□□ -1.75
PRPF4-203ENST00000488937 TOMM20Q15388 145 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 SF1Q15637 639 aaKnown RBP4.09□□□□□ -1.75
PRPF4-203ENST00000488937 PRR16Q569H4 304 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 DGKKQ5KSL6 1271 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 IFIT1BQ5T764 474 aaKnown RBP4.09□□□□□ -1.75
PRPF4-203ENST00000488937 PAQR3Q6TCH7 311 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 ZPBP2Q6X784 338 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 OVCH2Q7RTZ1 564 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 MAATS1Q7Z4T9 603 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 DDX53Q86TM3 631 aaKnown RBP4.09□□□□□ -1.75
PRPF4-203ENST00000488937 KRT78Q8N1N4 520 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 ARHGEF39Q8N4T4 335 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 ACRBPQ8NEB7 543 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 BTN2A2Q8WVV5 523 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 KCTD13Q8WZ19 329 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 DIO2Q92813 273 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 CHFRQ96EP1 664 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 CDK5RAP3Q96JB5 506 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 CCDC138Q96M89 665 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 FGD4Q96M96 766 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 ACO2Q99798 780 aaKnown RBP4.09□□□□□ -1.75
PRPF4-203ENST00000488937 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.09□□□□□ -1.753e-7■■■■■ 42.3
PRPF4-203ENST00000488937 GP6Q9HCN6 339 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 CYP26B1Q9NR63 512 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 GFOD1Q9NXC2 390 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 WHRNQ9P202 907 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 HDAC9Q9UKV0 1011 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 MINPP1Q9UNW1 487 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 TRAF6Q9Y4K3 522 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 MRFAP1Q9Y605 127 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 FHOD1Q9Y613 1164 aa4.09□□□□□ -1.75
PRPF4-203ENST00000488937 A6NCN8 305 aa4.08□□□□□ -1.76
PRPF4-203ENST00000488937 M0R3H8 397 aa4.08□□□□□ -1.76
PRPF4-203ENST00000488937 AQP7O14520 342 aa4.08□□□□□ -1.76
PRPF4-203ENST00000488937 NCAM2O15394 837 aa4.08□□□□□ -1.76
PRPF4-203ENST00000488937 ORC4O43929 436 aa4.08□□□□□ -1.76
PRPF4-203ENST00000488937 GAS7O60861 476 aa4.08□□□□□ -1.76
PRPF4-203ENST00000488937 OFD1O75665 1012 aa4.08□□□□□ -1.76
PRPF4-203ENST00000488937 CNOT4O95628 575 aaKnown RBP4.08□□□□□ -1.76
PRPF4-203ENST00000488937 PLA2G1BP04054 148 aaKnown RBP4.08□□□□□ -1.76
PRPF4-203ENST00000488937 CKMP06732 381 aa4.08□□□□□ -1.76
PRPF4-203ENST00000488937 NAT1P18440 290 aa4.08□□□□□ -1.76
PRPF4-203ENST00000488937 CAPN3P20807 821 aa4.08□□□□□ -1.76
PRPF4-203ENST00000488937 KRTAP5-9P26371 169 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms