RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 TAPT1Q6NXT6 567 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 MAEAQ7L5Y9 396 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 EEPD1Q7L9B9 569 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 FBXO16Q8IX29 292 aaPredicted RBP12.07□□□□□ -0.48
VTI1A-204ENST00000480057 NEK11Q8NG66 645 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 ZNF526Q8TF50 670 aaPredicted RBP12.07□□□□□ -0.48
VTI1A-204ENST00000480057 ATP8B4Q8TF62 1192 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 CPLX3Q8WVH0 158 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 SLC7A3Q8WY07 619 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 SYN2Q92777 582 aaPredicted RBP12.07□□□□□ -0.48
VTI1A-204ENST00000480057 PPP1R13BQ96KQ4 1090 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 SPATA33Q96N06 139 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 KATNBL1Q9H079 304 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 SMARCAD1Q9H4L7 1026 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 POLD4Q9HCU8 107 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 PLCB1Q9NQ66 1216 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 GPRC5CQ9NQ84 441 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 KMT5AQ9NQR1 393 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.07□□□□□ -0.48
VTI1A-204ENST00000480057 CEP72Q9P209 647 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 ARHGAP28Q9P2N2 729 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 FBXL5Q9UKA1 691 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 TBX20Q9UMR3 447 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 TELO2Q9Y4R8 837 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 TLL2Q9Y6L7 1015 aa12.07□□□□□ -0.48
VTI1A-204ENST00000480057 KIAA0391O15091 583 aaKnown RBP12.06□□□□□ -0.48
VTI1A-204ENST00000480057 CLIC2O15247 247 aa12.06□□□□□ -0.48
VTI1A-204ENST00000480057 SLC16A4O15374 487 aa12.06□□□□□ -0.48
VTI1A-204ENST00000480057 MAFO75444 373 aaPredicted RBP12.06□□□□□ -0.48
VTI1A-204ENST00000480057 GH1P01241 217 aa12.06□□□□□ -0.48
VTI1A-204ENST00000480057 HOXC6P09630 235 aa12.06□□□□□ -0.48
VTI1A-204ENST00000480057 CCDC175P0C221 793 aa12.06□□□□□ -0.48
VTI1A-204ENST00000480057 ARL2P36404 184 aa12.06□□□□□ -0.48
VTI1A-204ENST00000480057 KCNMA1Q12791 1236 aa12.06□□□□□ -0.48
VTI1A-204ENST00000480057 PTPN14Q15678 1187 aa12.06□□□□□ -0.48
VTI1A-204ENST00000480057 BRDTQ58F21 947 aaPredicted RBP12.06□□□□□ -0.48
VTI1A-204ENST00000480057 DNTTIP2Q5QJE6 756 aaKnown RBP12.06□□□□□ -0.48
VTI1A-204ENST00000480057 INTS8Q75QN2 995 aaKnown RBP12.06□□□□□ -0.48
VTI1A-204ENST00000480057 DPP9Q86TI2 863 aa12.06□□□□□ -0.48
VTI1A-204ENST00000480057 CCDC170Q8IYT3 715 aa12.06□□□□□ -0.48
VTI1A-204ENST00000480057 TCP11Q8WWU5 503 aa12.06□□□□□ -0.48
VTI1A-204ENST00000480057 SLC35C1Q96A29 364 aa12.06□□□□□ -0.48
VTI1A-204ENST00000480057 MAML3Q96JK9 1138 aa12.06□□□□□ -0.48
VTI1A-204ENST00000480057 PRIMPOLQ96LW4 560 aa12.06□□□□□ -0.48
VTI1A-204ENST00000480057 POLR3FQ9H1D9 316 aaPredicted RBP12.06□□□□□ -0.48
VTI1A-204ENST00000480057 MYO6Q9UM54 1294 aa12.06□□□□□ -0.48
VTI1A-204ENST00000480057 PPP2R2CQ9Y2T4 447 aa12.06□□□□□ -0.48
VTI1A-204ENST00000480057 SIP14410 1827 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 DENND3A2RUS2 1198 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 CCDC169A6NNP5 214 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 RNF225M0QZC1 329 aaPredicted RBP12.05□□□□□ -0.48
VTI1A-204ENST00000480057 IGF2BP3O00425 579 aaKnown RBP eCLIP12.05□□□□□ -0.48
VTI1A-204ENST00000480057 PMM2O15305 246 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 P4HA2O15460 535 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 HBP1O60381 514 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 EXOC3O60645 756 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 N4BP1O75113 896 aaKnown RBP12.05□□□□□ -0.48
VTI1A-204ENST00000480057 PIGRP01833 764 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 KRT13P13646 458 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 TNNT1P13805 278 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 CASP4P49662 377 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 ARHGAP1Q07960 439 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 TAF1CQ15572 869 aaPredicted RBP12.05□□□□□ -0.48
VTI1A-204ENST00000480057 HSDL1Q3SXM5 330 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 MORN1Q5T089 497 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 IER5Q5VY09 327 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 IQSEC1Q6DN90 963 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 GBP6Q6ZN66 633 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 IFNL1Q8IU54 200 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 REXO1L1PQ8IX06 675 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 XXYLT1Q8NBI6 393 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 PPTC7Q8NI37 304 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 BSNDQ8WZ55 320 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 TINF2Q9BSI4 451 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 ABHD16BQ9H3Z7 469 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 TMEM134Q9H6X4 195 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 MMRN2Q9H8L6 949 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 PLAGL2Q9UPG8 496 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 PAXBP1Q9Y5B6 917 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 UTRNP46939 3433 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 MCM3APO60318 1980 aa12.05□□□□□ -0.48
VTI1A-204ENST00000480057 IGKV6-21A0A0C4DH24 114 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 SOWAHDA6NJG2 315 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 USP27XA6NNY8 438 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 FAM155AB1AL88 458 aaPredicted RBP12.04□□□□□ -0.48
VTI1A-204ENST00000480057 SORBS3O60504 671 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 TLR2O60603 784 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 ABCB7O75027 752 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 SNAI1O95863 264 aaPredicted RBP12.04□□□□□ -0.48
VTI1A-204ENST00000480057 HOXD8P13378 290 aaPredicted RBP12.04□□□□□ -0.48
VTI1A-204ENST00000480057 GARTP22102 1010 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 KLK7P49862 253 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 BFSP1Q12934 665 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 MAP2K5Q13163 448 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 PLCB4Q15147 1175 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 ZNF484Q5JVG2 852 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 C17orf99Q6UX52 265 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 RAD9BQ6WBX8 426 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 ZNF662Q6ZS27 426 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 CACNA2D4Q7Z3S7 1137 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms