RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 TBKBP1A7MCY6 615 aa11.38□□□□□ -0.59
CCM2-208ENST00000476594 LPXNO60711 386 aa11.38□□□□□ -0.59
CCM2-208ENST00000476594 ERLIN2O94905 339 aa11.38□□□□□ -0.59
CCM2-208ENST00000476594 STBD1O95210 358 aa11.38□□□□□ -0.59
CCM2-208ENST00000476594 LAG3P18627 525 aa11.38□□□□□ -0.59
CCM2-208ENST00000476594 GJB2P29033 226 aa11.38□□□□□ -0.59
CCM2-208ENST00000476594 NPEPPSP55786 919 aa11.38□□□□□ -0.59
CCM2-208ENST00000476594 ZNF174Q15697 407 aa11.38□□□□□ -0.59
CCM2-208ENST00000476594 PAN2Q504Q3 1202 aaKnown RBP11.38□□□□□ -0.59
CCM2-208ENST00000476594 TWF2Q6IBS0 349 aaKnown RBP11.38□□□□□ -0.59
CCM2-208ENST00000476594 LRRC43Q8N309 656 aa11.38□□□□□ -0.59
CCM2-208ENST00000476594 MCPH1Q8NEM0 835 aa11.38□□□□□ -0.59
CCM2-208ENST00000476594 PGBD4Q96DM1 585 aa11.38□□□□□ -0.59
CCM2-208ENST00000476594 NACC1Q96RE7 527 aa11.38□□□□□ -0.59
CCM2-208ENST00000476594 CEP89Q96ST8 783 aa11.38□□□□□ -0.59
CCM2-208ENST00000476594 HSD17B14Q9BPX1 270 aa11.38□□□□□ -0.59
CCM2-208ENST00000476594 SH2D3AQ9BRG2 576 aa11.38□□□□□ -0.59
CCM2-208ENST00000476594 FDXACB1Q9BRP7 624 aaPredicted RBP11.38□□□□□ -0.59
CCM2-208ENST00000476594 TMEM117Q9H0C3 514 aa11.38□□□□□ -0.59
CCM2-208ENST00000476594 NSUN3Q9H649 340 aaKnown RBP11.38□□□□□ -0.59
CCM2-208ENST00000476594 DAXXQ9UER7 740 aaPredicted RBP11.38□□□□□ -0.59
CCM2-208ENST00000476594 PIN4Q9Y237 131 aaKnown RBP11.38□□□□□ -0.59
CCM2-208ENST00000476594 COL4A4P53420 1690 aaPredicted RBP11.38□□□□□ -0.59
CCM2-208ENST00000476594 UNC80Q8N2C7 3258 aa11.37□□□□□ -0.59
CCM2-208ENST00000476594 A0A0U1RQF3 1178 aa11.37□□□□□ -0.59
CCM2-208ENST00000476594 TMEM150BA6NC51 233 aa11.37□□□□□ -0.59
CCM2-208ENST00000476594 POTEMA6NI47 508 aa11.37□□□□□ -0.59
CCM2-208ENST00000476594 MGEA5O60502 916 aa11.37□□□□□ -0.59
CCM2-208ENST00000476594 PDCP20941 246 aa11.37□□□□□ -0.59
CCM2-208ENST00000476594 PPM1AP35813 382 aa11.37□□□□□ -0.59
CCM2-208ENST00000476594 TECP42680 631 aa11.37□□□□□ -0.59
CCM2-208ENST00000476594 FAM189BP81408 668 aa11.37□□□□□ -0.59
CCM2-208ENST00000476594 UBE3AQ05086 875 aa11.37□□□□□ -0.59
CCM2-208ENST00000476594 DSC3Q14574 896 aa11.37□□□□□ -0.59
CCM2-208ENST00000476594 SPRED2Q7Z698 418 aa11.37□□□□□ -0.59
CCM2-208ENST00000476594 RNF169Q8NCN4 708 aa11.37□□□□□ -0.59
CCM2-208ENST00000476594 PRPF31Q8WWY3 499 aaKnown RBP11.37□□□□□ -0.59
CCM2-208ENST00000476594 ZNF668Q96K58 619 aaPredicted RBP11.37□□□□□ -0.59
CCM2-208ENST00000476594 ASB2Q96Q27 587 aa11.37□□□□□ -0.59
CCM2-208ENST00000476594 POLR3CQ9BUI4 534 aaPredicted RBP11.37□□□□□ -0.59
CCM2-208ENST00000476594 TRAIPQ9BWF2 469 aa11.37□□□□□ -0.59
CCM2-208ENST00000476594 TMEM60Q9H2L4 133 aa11.37□□□□□ -0.59
CCM2-208ENST00000476594 LRWD1Q9UFC0 647 aa11.37□□□□□ -0.59
CCM2-208ENST00000476594 MRPL42Q9Y6G3 142 aaKnown RBP11.37□□□□□ -0.59
CCM2-208ENST00000476594 EYSQ5T1H1 3165 aa11.37□□□□□ -0.59
CCM2-208ENST00000476594 A0A0C4DFX4 3053 aa11.37□□□□□ -0.59
CCM2-208ENST00000476594 NLRC5Q86WI3 1866 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 ARHGEF35A5YM69 484 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 BMP15O95972 392 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 SRGAP2CP0DJJ0 459 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 RPA1P27694 616 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 AXLP30530 894 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 PRPHP41219 470 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 RARRES1P49788 294 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 FXR2P51116 673 aaKnown RBP eCLIP11.36□□□□□ -0.59
CCM2-208ENST00000476594 POU5F1BQ06416 359 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 LAMTOR4Q0VGL1 99 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 DRP2Q13474 957 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 PDIA5Q14554 519 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 BMS1Q14692 1282 aaKnown RBP11.36□□□□□ -0.59
CCM2-208ENST00000476594 KRT79Q5XKE5 535 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 LARP1BQ659C4 914 aaKnown RBP11.36□□□□□ -0.59
CCM2-208ENST00000476594 FERMT3Q86UX7 667 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 ECHDC2Q86YB7 292 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 THNSL1Q8IYQ7 743 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 HACE1Q8IYU2 909 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 CRIPAKQ8N1N5 446 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 RNF149Q8NC42 400 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 CNNM3Q8NE01 707 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 TMEM143Q96AN5 459 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 CCDC51Q96ER9 411 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 BMP2KQ9NSY1 1161 aaPredicted RBP11.36□□□□□ -0.59
CCM2-208ENST00000476594 WRAP73Q9P2S5 460 aaPredicted RBP11.36□□□□□ -0.59
CCM2-208ENST00000476594 PUF60Q9UHX1 559 aaKnown RBP11.36□□□□□ -0.59
CCM2-208ENST00000476594 DBR1Q9UK59 544 aaKnown RBP11.36□□□□□ -0.59
CCM2-208ENST00000476594 FAM50BQ9Y247 325 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 PRUNE2Q8WUY3 3088 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 CUL9Q8IWT3 2517 aa11.36□□□□□ -0.59
CCM2-208ENST00000476594 USO1O60763 962 aaKnown RBP11.35□□□□□ -0.59
CCM2-208ENST00000476594 CCT6AP40227 531 aaKnown RBP11.35□□□□□ -0.59
CCM2-208ENST00000476594 KRT17Q04695 432 aa11.35□□□□□ -0.59
CCM2-208ENST00000476594 PTGDRQ13258 359 aa11.35□□□□□ -0.59
CCM2-208ENST00000476594 PPP2R5AQ15172 486 aa11.35□□□□□ -0.59
CCM2-208ENST00000476594 PUS10Q3MIT2 529 aaKnown RBP11.35□□□□□ -0.59
CCM2-208ENST00000476594 PDE12Q6L8Q7 609 aaKnown RBP11.35□□□□□ -0.59
CCM2-208ENST00000476594 GLB1LQ6UWU2 654 aa11.35□□□□□ -0.59
CCM2-208ENST00000476594 DTHD1Q6ZMT9 781 aa11.35□□□□□ -0.59
CCM2-208ENST00000476594 CATSPER3Q86XQ3 398 aa11.35□□□□□ -0.59
CCM2-208ENST00000476594 ZBTB8OSQ8IWT0 167 aa11.35□□□□□ -0.59
CCM2-208ENST00000476594 KCTD17Q8N5Z5 321 aa11.35□□□□□ -0.59
CCM2-208ENST00000476594 URGCPQ8TCY9 931 aa11.35□□□□□ -0.59
CCM2-208ENST00000476594 PIGOQ8TEQ8 1089 aa11.35□□□□□ -0.59
CCM2-208ENST00000476594 ZNF558Q96NG5 402 aa11.35□□□□□ -0.59
CCM2-208ENST00000476594 BACH2Q9BYV9 841 aa11.35□□□□□ -0.59
CCM2-208ENST00000476594 C2orf40Q9H1Z8 148 aa11.35□□□□□ -0.59
CCM2-208ENST00000476594 AGPAT5Q9NUQ2 364 aa11.35□□□□□ -0.59
CCM2-208ENST00000476594 CNTNAP2Q9UHC6 1331 aa11.35□□□□□ -0.59
CCM2-208ENST00000476594 INO80B-WBP1J3KQ70 363 aa11.34□□□□□ -0.59
CCM2-208ENST00000476594 WNT7AO00755 349 aa11.34□□□□□ -0.59
CCM2-208ENST00000476594 FGFR1P11362 822 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms