RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 ZNF236Q9UL36 1845 aa23.14■■□□□ 1.29
PPP1R3F-203ENST00000466508 TXNP10599 105 aaKnown RBP23.14■■□□□ 1.29
PPP1R3F-203ENST00000466508 MAP4K3Q8IVH8 894 aa23.14■■□□□ 1.29
PPP1R3F-203ENST00000466508 DHX37Q8IY37 1157 aaKnown RBP23.14■■□□□ 1.29
PPP1R3F-203ENST00000466508 CHP1Q99653 195 aa23.14■■□□□ 1.29
PPP1R3F-203ENST00000466508 AZI2Q9H6S1 392 aa23.14■■□□□ 1.29
PPP1R3F-203ENST00000466508 NRBP2Q9NSY0 501 aa23.14■■□□□ 1.29
PPP1R3F-203ENST00000466508 TBX20Q9UMR3 447 aa23.14■■□□□ 1.29
PPP1R3F-203ENST00000466508 LGR5O75473 907 aa23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 ZNF157P51786 506 aaPredicted RBP23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 GRB14Q14449 540 aa23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 TCERG1LQ5VWI1 586 aa23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 SAPCD2Q86UD0 394 aa23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 PRIMPOLQ96LW4 560 aa23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 CEP89Q96ST8 783 aa23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 KIFC3Q9BVG8 833 aa23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 POLR3FQ9H1D9 316 aaPredicted RBP23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 EXOC7Q9UPT5 735 aa23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 DIS3Q9Y2L1 958 aaKnown RBP23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 DENND3A2RUS2 1198 aa23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 TUBB4AP04350 444 aa23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 HNRNPH3P31942 346 aaKnown RBP23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 TARBP2Q15633 366 aaKnown RBP23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 SLC7A3Q8WY07 619 aa23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 FAM167AQ96KS9 214 aa23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 IFT74Q96LB3 600 aa23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 SPATA33Q96N06 139 aa23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 CRACR2AQ9BSW2 395 aa23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 LSM14BQ9BX40 385 aaKnown RBP23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 VTA1Q9NP79 307 aa23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 PDGFCQ9NRA1 345 aa23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 PLAGL2Q9UPG8 496 aa23.13■■□□□ 1.29
PPP1R3F-203ENST00000466508 EXOC3O60645 756 aa23.12■■□□□ 1.29
PPP1R3F-203ENST00000466508 MAPK4P31152 587 aa23.12■■□□□ 1.29
PPP1R3F-203ENST00000466508 RFC5P40937 340 aa23.12■■□□□ 1.29
PPP1R3F-203ENST00000466508 VEGFBP49765 207 aa23.12■■□□□ 1.29
PPP1R3F-203ENST00000466508 CDK17Q00537 523 aa23.12■■□□□ 1.29
PPP1R3F-203ENST00000466508 PAXIP1Q6ZW49 1069 aaPredicted RBP23.12■■□□□ 1.29
PPP1R3F-203ENST00000466508 BAP1Q92560 729 aa23.12■■□□□ 1.29
PPP1R3F-203ENST00000466508 CEP72Q9P209 647 aa23.12■■□□□ 1.29
PPP1R3F-203ENST00000466508 KCNG1Q9UIX4 513 aa23.12■■□□□ 1.29
PPP1R3F-203ENST00000466508 EMSYQ7Z589 1322 aa23.12■■□□□ 1.29
PPP1R3F-203ENST00000466508 ADGRA3Q8IWK6 1321 aa23.12■■□□□ 1.29
PPP1R3F-203ENST00000466508 MANSC4A6NHS7 340 aaPredicted RBP23.11■■□□□ 1.29
PPP1R3F-203ENST00000466508 TISP43B9A030 160 aa23.11■■□□□ 1.29
PPP1R3F-203ENST00000466508 NOL4O94818 638 aa23.11■■□□□ 1.29
PPP1R3F-203ENST00000466508 ABCD1P33897 745 aa23.11■■□□□ 1.29
PPP1R3F-203ENST00000466508 TERF1P54274 439 aa23.11■■□□□ 1.29
PPP1R3F-203ENST00000466508 PPP2R5AQ15172 486 aa23.11■■□□□ 1.29
PPP1R3F-203ENST00000466508 CACNA2D4Q7Z3S7 1137 aa23.11■■□□□ 1.29
PPP1R3F-203ENST00000466508 ZCCHC17Q9NP64 241 aaKnown RBP23.11■■□□□ 1.29
PPP1R3F-203ENST00000466508 PPME1Q9Y570 386 aa23.11■■□□□ 1.29
PPP1R3F-203ENST00000466508 SIP14410 1827 aa23.11■■□□□ 1.29
PPP1R3F-203ENST00000466508 GTPBP10A4D1E9 387 aaKnown RBP23.11■■□□□ 1.29
PPP1R3F-203ENST00000466508 H0YCG3 227 aa23.11■■□□□ 1.29
PPP1R3F-203ENST00000466508 TAPT1Q6NXT6 567 aa23.11■■□□□ 1.29
PPP1R3F-203ENST00000466508 MAMDC4Q6UXC1 1216 aa23.11■■□□□ 1.29
PPP1R3F-203ENST00000466508 PLPPR4Q7Z2D5 763 aa23.11■■□□□ 1.29
PPP1R3F-203ENST00000466508 PLEKHH3Q7Z736 793 aa23.11■■□□□ 1.29
PPP1R3F-203ENST00000466508 GLG1Q92896 1179 aa23.11■■□□□ 1.29
PPP1R3F-203ENST00000466508 COPS5Q92905 334 aa23.11■■□□□ 1.29
PPP1R3F-203ENST00000466508 CBWD1Q9BRT8 395 aa23.11■■□□□ 1.29
PPP1R3F-203ENST00000466508 ARHGAP28Q9P2N2 729 aa23.11■■□□□ 1.29
PPP1R3F-203ENST00000466508 EPN1Q9Y6I3 576 aaPredicted RBP23.11■■□□□ 1.29
PPP1R3F-203ENST00000466508 ADGRA2Q96PE1 1338 aa23.1■■□□□ 1.29
PPP1R3F-203ENST00000466508 DOCK3Q8IZD9 2030 aa23.1■■□□□ 1.29
PPP1R3F-203ENST00000466508 IGF2BP3O00425 579 aaKnown RBP eCLIP23.1■■□□□ 1.29
PPP1R3F-203ENST00000466508 NDUFA10O95299 355 aa23.1■■□□□ 1.29
PPP1R3F-203ENST00000466508 DPP9Q86TI2 863 aa23.1■■□□□ 1.29
PPP1R3F-203ENST00000466508 BBXQ8WY36 941 aaPredicted RBP23.1■■□□□ 1.29
PPP1R3F-203ENST00000466508 PLCB1Q9NQ66 1216 aa23.1■■□□□ 1.29
PPP1R3F-203ENST00000466508 HSPBP1Q9NZL4 362 aa23.1■■□□□ 1.29
PPP1R3F-203ENST00000466508 PAXBP1Q9Y5B6 917 aa23.1■■□□□ 1.29
PPP1R3F-203ENST00000466508 EXOC3L4Q17RC7 722 aa23.09■■□□□ 1.29
PPP1R3F-203ENST00000466508 TMEM63BQ5T3F8 832 aa23.09■■□□□ 1.29
PPP1R3F-203ENST00000466508 RRAGAQ7L523 313 aa23.09■■□□□ 1.29
PPP1R3F-203ENST00000466508 TRIM50Q86XT4 487 aa23.09■■□□□ 1.29
PPP1R3F-203ENST00000466508 XXYLT1Q8NBI6 393 aa23.09■■□□□ 1.29
PPP1R3F-203ENST00000466508 ZNF592Q92610 1267 aa23.09■■□□□ 1.29
PPP1R3F-203ENST00000466508 KCNN1Q92952 543 aa23.09■■□□□ 1.29
PPP1R3F-203ENST00000466508 TMEM143Q96AN5 459 aa23.09■■□□□ 1.29
PPP1R3F-203ENST00000466508 NUCKS1Q9H1E3 243 aaKnown RBP23.09■■□□□ 1.29
PPP1R3F-203ENST00000466508 PCIF1Q9H4Z3 704 aa23.09■■□□□ 1.29
PPP1R3F-203ENST00000466508 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.09■■□□□ 1.29
PPP1R3F-203ENST00000466508 RBM47A0AV96 593 aaKnown RBP23.09■■□□□ 1.29
PPP1R3F-203ENST00000466508 LRRC53A6NM62 1247 aa23.09■■□□□ 1.29
PPP1R3F-203ENST00000466508 SCP2P22307 547 aa23.09■■□□□ 1.29
PPP1R3F-203ENST00000466508 ARL2P36404 184 aa23.09■■□□□ 1.29
PPP1R3F-203ENST00000466508 SLC26A2P50443 739 aa23.09■■□□□ 1.29
PPP1R3F-203ENST00000466508 ETF1P62495 437 aaKnown RBP23.09■■□□□ 1.29
PPP1R3F-203ENST00000466508 BFSP1Q12934 665 aa23.09■■□□□ 1.29
PPP1R3F-203ENST00000466508 RGMBQ6NW40 437 aa23.09■■□□□ 1.29
PPP1R3F-203ENST00000466508 ACRBPQ8NEB7 543 aa23.09■■□□□ 1.29
PPP1R3F-203ENST00000466508 HHIPL1Q96JK4 782 aa23.09■■□□□ 1.29
PPP1R3F-203ENST00000466508 KATNBL1Q9H079 304 aa23.09■■□□□ 1.29
PPP1R3F-203ENST00000466508 MAPK13O15264 365 aa23.08■■□□□ 1.29
PPP1R3F-203ENST00000466508 CNGA1P29973 690 aa23.08■■□□□ 1.29
PPP1R3F-203ENST00000466508 ARHGAP1Q07960 439 aa23.08■■□□□ 1.29
PPP1R3F-203ENST00000466508 PDXDC1Q6P996 788 aa23.08■■□□□ 1.29
PPP1R3F-203ENST00000466508 TRIM65Q6PJ69 517 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms