RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 LRRC71Q8N4P6 559 aa16.39■□□□□ 0.21
CXCR4-203ENST00000466288 IGSF21Q96ID5 467 aa16.39■□□□□ 0.21
CXCR4-203ENST00000466288 MAP7D2Q96T17 732 aa16.39■□□□□ 0.21
CXCR4-203ENST00000466288 R4GN57 208 aa16.39■□□□□ 0.21
CXCR4-203ENST00000466288 NCOR2Q9Y618 2525 aa16.39■□□□□ 0.21
CXCR4-203ENST00000466288 KRBA1A5PL33 1030 aa16.38■□□□□ 0.21
CXCR4-203ENST00000466288 IPO5O00410 1097 aaKnown RBP16.38■□□□□ 0.21
CXCR4-203ENST00000466288 SGSM2O43147 1006 aa16.38■□□□□ 0.21
CXCR4-203ENST00000466288 ZC3H11AO75152 810 aaKnown RBP eCLIP16.38■□□□□ 0.21
CXCR4-203ENST00000466288 DARSP14868 501 aaKnown RBP16.38■□□□□ 0.21
CXCR4-203ENST00000466288 MCM5P33992 734 aa16.38■□□□□ 0.21
CXCR4-203ENST00000466288 CLK2P49760 499 aaKnown RBP16.38■□□□□ 0.21
CXCR4-203ENST00000466288 GPC3P51654 580 aa16.38■□□□□ 0.21
CXCR4-203ENST00000466288 NAPAP54920 295 aa16.38■□□□□ 0.21
CXCR4-203ENST00000466288 TTC22Q5TAA0 569 aa16.38■□□□□ 0.21
CXCR4-203ENST00000466288 PPP1R18Q6NYC8 613 aa16.38■□□□□ 0.21
CXCR4-203ENST00000466288 PPFIBP1Q86W92 1011 aa16.38■□□□□ 0.21
CXCR4-203ENST00000466288 PLA2G4DQ86XP0 818 aa16.38■□□□□ 0.21
CXCR4-203ENST00000466288 VN1R3Q9BXE9 311 aa16.38■□□□□ 0.21
CXCR4-203ENST00000466288 IGSF9Q9P2J2 1179 aa16.38■□□□□ 0.21
CXCR4-203ENST00000466288 WNT16Q9UBV4 365 aa16.38■□□□□ 0.21
CXCR4-203ENST00000466288 RBM8AQ9Y5S9 174 aaKnown RBP16.38■□□□□ 0.21
CXCR4-203ENST00000466288 SLC12A7Q9Y666 1083 aa16.38■□□□□ 0.21
CXCR4-203ENST00000466288 N4BP1O75113 896 aaKnown RBP16.37■□□□□ 0.21
CXCR4-203ENST00000466288 GALTP07902 379 aa16.37■□□□□ 0.21
CXCR4-203ENST00000466288 TMOD1P28289 359 aa16.37■□□□□ 0.21
CXCR4-203ENST00000466288 CLCN4P51793 760 aa16.37■□□□□ 0.21
CXCR4-203ENST00000466288 ADCY7P51828 1080 aa16.37■□□□□ 0.21
CXCR4-203ENST00000466288 AP3B2Q13367 1082 aa16.37■□□□□ 0.21
CXCR4-203ENST00000466288 PUM1Q14671 1186 aaKnown RBP eCLIP16.37■□□□□ 0.21
CXCR4-203ENST00000466288 PTPN14Q15678 1187 aa16.37■□□□□ 0.21
CXCR4-203ENST00000466288 LETM2Q2VYF4 491 aa16.37■□□□□ 0.21
CXCR4-203ENST00000466288 ZNF746Q6NUN9 644 aaPredicted RBP16.37■□□□□ 0.21
CXCR4-203ENST00000466288 CRYGNQ8WXF5 182 aa16.37■□□□□ 0.21
CXCR4-203ENST00000466288 NRDE2Q9H7Z3 1164 aa16.37■□□□□ 0.21
CXCR4-203ENST00000466288 DACT1Q9NYF0 836 aa16.37■□□□□ 0.21
CXCR4-203ENST00000466288 DLL3Q9NYJ7 618 aa16.37■□□□□ 0.21
CXCR4-203ENST00000466288 EVPLQ92817 2033 aa16.37■□□□□ 0.21
CXCR4-203ENST00000466288 DENND4AQ7Z401 1863 aa16.37■□□□□ 0.21
CXCR4-203ENST00000466288 CNTNAP5Q8WYK1 1306 aa16.37■□□□□ 0.21
CXCR4-203ENST00000466288 CFHP08603 1231 aa16.36■□□□□ 0.21
CXCR4-203ENST00000466288 C15orf39Q6ZRI6 1047 aa16.36■□□□□ 0.21
CXCR4-203ENST00000466288 SMAP1Q8IYB5 467 aaPredicted RBP16.36■□□□□ 0.21
CXCR4-203ENST00000466288 RSPH1Q8WYR4 309 aa16.36■□□□□ 0.21
CXCR4-203ENST00000466288 KLHL5Q96PQ7 755 aa16.36■□□□□ 0.21
CXCR4-203ENST00000466288 TRAIPQ9BWF2 469 aa16.36■□□□□ 0.21
CXCR4-203ENST00000466288 TBC1D22BQ9NU19 505 aa16.36■□□□□ 0.21
CXCR4-203ENST00000466288 PPP4R2Q9NY27 417 aa16.36■□□□□ 0.21
CXCR4-203ENST00000466288 GABBR1Q9UBS5 961 aa16.36■□□□□ 0.21
CXCR4-203ENST00000466288 PCDHA10Q9Y5I2 948 aa16.36■□□□□ 0.21
CXCR4-203ENST00000466288 CARNS1A5YM72 827 aa16.35■□□□□ 0.21
CXCR4-203ENST00000466288 SMCO2A6NFE2 343 aa16.35■□□□□ 0.21
CXCR4-203ENST00000466288 STK25O00506 426 aa16.35■□□□□ 0.21
CXCR4-203ENST00000466288 LILRB3O75022 631 aa16.35■□□□□ 0.21
CXCR4-203ENST00000466288 CSDE1O75534 798 aaKnown RBP16.35■□□□□ 0.21
CXCR4-203ENST00000466288 PSAPP07602 524 aa16.35■□□□□ 0.21
CXCR4-203ENST00000466288 CYP3A4P08684 503 aa16.35■□□□□ 0.21
CXCR4-203ENST00000466288 PHKA2P46019 1235 aa16.35■□□□□ 0.21
CXCR4-203ENST00000466288 FUT2Q10981 343 aa16.35■□□□□ 0.21
CXCR4-203ENST00000466288 SGMS1Q86VZ5 419 aa16.35■□□□□ 0.21
CXCR4-203ENST00000466288 MICU3Q86XE3 530 aa16.35■□□□□ 0.21
CXCR4-203ENST00000466288 RSAD2Q8WXG1 361 aa16.35■□□□□ 0.21
CXCR4-203ENST00000466288 RIN2Q8WYP3 895 aaPredicted RBP16.35■□□□□ 0.21
CXCR4-203ENST00000466288 LPPQ93052 612 aa16.35■□□□□ 0.21
CXCR4-203ENST00000466288 FAM167AQ96KS9 214 aa16.35■□□□□ 0.21
CXCR4-203ENST00000466288 ZNF577Q9BSK1 485 aa16.35■□□□□ 0.21
CXCR4-203ENST00000466288 TBC1D13Q9NVG8 400 aa16.35■□□□□ 0.21
CXCR4-203ENST00000466288 ZNF862O60290 1169 aa16.35■□□□□ 0.21
CXCR4-203ENST00000466288 CNPP09543 421 aaKnown RBP16.35■□□□□ 0.21
CXCR4-203ENST00000466288 SLC11A1P49279 550 aa16.35■□□□□ 0.21
CXCR4-203ENST00000466288 LRRC2Q9BYS8 371 aa16.35■□□□□ 0.21
CXCR4-203ENST00000466288 CHST12Q9NRB3 414 aa16.35■□□□□ 0.21
CXCR4-203ENST00000466288 BARHL2Q9NY43 387 aa16.35■□□□□ 0.21
CXCR4-203ENST00000466288 DLGAP2Q9P1A6 1054 aa16.35■□□□□ 0.21
CXCR4-203ENST00000466288 DNAJB4Q9UDY4 337 aa16.35■□□□□ 0.21
CXCR4-203ENST00000466288 EPG5Q9HCE0 2579 aa16.34■□□□□ 0.21
CXCR4-203ENST00000466288 SPDYE4A6NLX3 237 aa16.34■□□□□ 0.21
CXCR4-203ENST00000466288 MEIS3P2A8K0S8 358 aa16.34■□□□□ 0.21
CXCR4-203ENST00000466288 B4GALT3O60512 393 aa16.34■□□□□ 0.21
CXCR4-203ENST00000466288 KRT37O76014 449 aa16.34■□□□□ 0.21
CXCR4-203ENST00000466288 KLRC2P26717 231 aa16.34■□□□□ 0.21
CXCR4-203ENST00000466288 TBC1D8BQ0IIM8 1120 aa16.34■□□□□ 0.21
CXCR4-203ENST00000466288 LONRF3Q496Y0 759 aa16.34■□□□□ 0.21
CXCR4-203ENST00000466288 NOMO2Q5JPE7 1267 aa16.34■□□□□ 0.21
CXCR4-203ENST00000466288 DCLK2Q8N568 766 aa16.34■□□□□ 0.21
CXCR4-203ENST00000466288 CMASQ8NFW8 434 aaPredicted RBP16.34■□□□□ 0.21
CXCR4-203ENST00000466288 NLRP7Q8WX94 980 aa16.34■□□□□ 0.21
CXCR4-203ENST00000466288 SCLT1Q96NL6 688 aa16.34■□□□□ 0.21
CXCR4-203ENST00000466288 EMILIN2Q9BXX0 1053 aa16.34■□□□□ 0.21
CXCR4-203ENST00000466288 TBC1D17Q9HA65 648 aa16.34■□□□□ 0.21
CXCR4-203ENST00000466288 CA14Q9ULX7 337 aa16.34■□□□□ 0.21
CXCR4-203ENST00000466288 V9GY48 417 aaPredicted RBP16.34■□□□□ 0.21
CXCR4-203ENST00000466288 OTOGLQ3ZCN5 2332 aa16.33■□□□□ 0.2
CXCR4-203ENST00000466288 OFD1O75665 1012 aa16.33■□□□□ 0.2
CXCR4-203ENST00000466288 OATP04181 439 aa16.33■□□□□ 0.2
CXCR4-203ENST00000466288 DCNP07585 359 aaKnown RBP16.33■□□□□ 0.2
CXCR4-203ENST00000466288 SP9P0CG40 484 aa16.33■□□□□ 0.2
CXCR4-203ENST00000466288 DRP2Q13474 957 aa16.33■□□□□ 0.2
CXCR4-203ENST00000466288 JAKMIP3Q5VZ66 844 aa16.33■□□□□ 0.2
CXCR4-203ENST00000466288 GLB1LQ6UWU2 654 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms