RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 DGKDQ16760 1214 aa3.56□□□□□ -1.84
LINC02540-201ENST00000455554 DCAF17Q5H9S7 520 aaPredicted RBP3.56□□□□□ -1.84
LINC02540-201ENST00000455554 CATSPEREQ5SY80 951 aa3.56□□□□□ -1.84
LINC02540-201ENST00000455554 PAPD7Q5XG87 772 aaKnown RBP3.56□□□□□ -1.84
LINC02540-201ENST00000455554 CLEC14AQ86T13 490 aa3.56□□□□□ -1.84
LINC02540-201ENST00000455554 RTN4RL1Q86UN2 441 aaPredicted RBP3.56□□□□□ -1.84
LINC02540-201ENST00000455554 MCF2L2Q86YR7 1114 aa3.56□□□□□ -1.84
LINC02540-201ENST00000455554 PLA2G15Q8NCC3 412 aa3.56□□□□□ -1.84
LINC02540-201ENST00000455554 ST8SIA2Q92186 375 aa3.56□□□□□ -1.84
LINC02540-201ENST00000455554 DLG3Q92796 817 aa3.56□□□□□ -1.84
LINC02540-201ENST00000455554 NKD2Q969F2 451 aaPredicted RBP3.56□□□□□ -1.84
LINC02540-201ENST00000455554 C16orf92Q96LL3 132 aa3.56□□□□□ -1.84
LINC02540-201ENST00000455554 IPO9Q96P70 1041 aaKnown RBP3.56□□□□□ -1.84
LINC02540-201ENST00000455554 FAM193BQ96PV7 902 aaPredicted RBP3.56□□□□□ -1.84
LINC02540-201ENST00000455554 POLR2AP24928 1970 aaKnown RBP3.55□□□□□ -1.84
LINC02540-201ENST00000455554 TRIM24O15164 1050 aa3.55□□□□□ -1.84
LINC02540-201ENST00000455554 ADCY3O60266 1144 aa3.55□□□□□ -1.84
LINC02540-201ENST00000455554 HIP1RO75146 1068 aa3.55□□□□□ -1.84
LINC02540-201ENST00000455554 SCAF4O95104 1147 aaKnown RBP3.55□□□□□ -1.84
LINC02540-201ENST00000455554 JUNP05412 331 aaKnown RBP3.55□□□□□ -1.84
LINC02540-201ENST00000455554 GYPEP15421 78 aa3.55□□□□□ -1.84
LINC02540-201ENST00000455554 LAG3P18627 525 aa3.55□□□□□ -1.84
LINC02540-201ENST00000455554 ERCC5P28715 1186 aaPredicted RBP3.55□□□□□ -1.84
LINC02540-201ENST00000455554 USP14P54578 494 aa3.55□□□□□ -1.84
LINC02540-201ENST00000455554 ANTXR2P58335 489 aa3.55□□□□□ -1.84
LINC02540-201ENST00000455554 FAM209AQ5JX71 171 aa3.55□□□□□ -1.84
LINC02540-201ENST00000455554 EPHA10Q5JZY3 1008 aa3.55□□□□□ -1.84
LINC02540-201ENST00000455554 Q6YL49 198 aa3.55□□□□□ -1.84
LINC02540-201ENST00000455554 FOXRED1Q96CU9 486 aaPredicted RBP3.55□□□□□ -1.84
LINC02540-201ENST00000455554 R3HDMLQ9H3Y0 253 aa3.55□□□□□ -1.84
LINC02540-201ENST00000455554 NCDNQ9UBB6 729 aa3.55□□□□□ -1.84
LINC02540-201ENST00000455554 SPATA31A6Q5VVP1 1343 aa3.54□□□□□ -1.84
LINC02540-201ENST00000455554 CENPVL1A0A0U1RR11 272 aa3.54□□□□□ -1.84
LINC02540-201ENST00000455554 SLC12A8A0AV02 714 aa3.54□□□□□ -1.84
LINC02540-201ENST00000455554 RASGRP1O95267 797 aa3.54□□□□□ -1.84
LINC02540-201ENST00000455554 APPP05067 770 aa3.54□□□□□ -1.84
LINC02540-201ENST00000455554 HK1P19367 917 aa3.54□□□□□ -1.84
LINC02540-201ENST00000455554 RGS3P49796 1198 aa3.54□□□□□ -1.84
LINC02540-201ENST00000455554 NPEPPSP55786 919 aa3.54□□□□□ -1.84
LINC02540-201ENST00000455554 ROM1Q03395 351 aa3.54□□□□□ -1.84
LINC02540-201ENST00000455554 SPIDRQ14159 915 aa3.54□□□□□ -1.84
LINC02540-201ENST00000455554 APBB1IPQ7Z5R6 666 aaPredicted RBP3.54□□□□□ -1.84
LINC02540-201ENST00000455554 CXorf67Q86X51 503 aaPredicted RBP3.54□□□□□ -1.84
LINC02540-201ENST00000455554 CMTM4Q8IZR5 234 aa3.54□□□□□ -1.84
LINC02540-201ENST00000455554 SUPT20HQ8NEM7 779 aa3.54□□□□□ -1.84
LINC02540-201ENST00000455554 E2F7Q96AV8 911 aa3.54□□□□□ -1.84
LINC02540-201ENST00000455554 WDR92Q96MX6 357 aa3.54□□□□□ -1.84
LINC02540-201ENST00000455554 CELF4Q9BZC1 486 aaKnown RBP3.54□□□□□ -1.84
LINC02540-201ENST00000455554 KCMF1Q9P0J7 381 aa3.54□□□□□ -1.84
LINC02540-201ENST00000455554 COQ6Q9Y2Z9 468 aa3.54□□□□□ -1.84
LINC02540-201ENST00000455554 DAPK3O43293 454 aa3.53□□□□□ -1.84
LINC02540-201ENST00000455554 PRLP01236 227 aa3.53□□□□□ -1.84
LINC02540-201ENST00000455554 ZEB1P37275 1124 aaPredicted RBP3.53□□□□□ -1.84
LINC02540-201ENST00000455554 RANGAP1P46060 587 aaPredicted RBP3.53□□□□□ -1.84
LINC02540-201ENST00000455554 SLC6A3Q01959 620 aa3.53□□□□□ -1.84
LINC02540-201ENST00000455554 FOXB2Q5VYV0 432 aa3.53□□□□□ -1.84
LINC02540-201ENST00000455554 FBXO42Q6P3S6 717 aa3.53□□□□□ -1.84
LINC02540-201ENST00000455554 SPATC1Q76KD6 591 aa3.53□□□□□ -1.84
LINC02540-201ENST00000455554 MYEOVQ96EZ4 313 aa3.53□□□□□ -1.84
LINC02540-201ENST00000455554 DYDC2Q96IM9 177 aa3.53□□□□□ -1.84
LINC02540-201ENST00000455554 KCNH6Q9H252 994 aa3.53□□□□□ -1.84
LINC02540-201ENST00000455554 SERHL2Q9H4I8 314 aa3.53□□□□□ -1.84
LINC02540-201ENST00000455554 ZNF768Q9H5H4 540 aaKnown RBP3.53□□□□□ -1.84
LINC02540-201ENST00000455554 C14orf93Q9H972 538 aaKnown RBP3.53□□□□□ -1.84
LINC02540-201ENST00000455554 POLR3BQ9NW08 1133 aaPredicted RBP3.53□□□□□ -1.84
LINC02540-201ENST00000455554 SFMBT1Q9UHJ3 866 aa3.53□□□□□ -1.84
LINC02540-201ENST00000455554 LPXNO60711 386 aa3.52□□□□□ -1.85
LINC02540-201ENST00000455554 STC2O76061 302 aa3.52□□□□□ -1.85
LINC02540-201ENST00000455554 AVPR1BP47901 424 aa3.52□□□□□ -1.85
LINC02540-201ENST00000455554 PTH2RP49190 550 aa3.52□□□□□ -1.85
LINC02540-201ENST00000455554 IRF9Q00978 393 aa3.52□□□□□ -1.85
LINC02540-201ENST00000455554 RAB33AQ14088 237 aa3.52□□□□□ -1.85
LINC02540-201ENST00000455554 ZNF362Q5T0B9 420 aaPredicted RBP3.52□□□□□ -1.85
LINC02540-201ENST00000455554 LCE1AQ5T7P2 110 aa3.52□□□□□ -1.85
LINC02540-201ENST00000455554 SLFN12LQ6IEE8 588 aa3.52□□□□□ -1.85
LINC02540-201ENST00000455554 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
LINC02540-201ENST00000455554 CC2D1AQ6P1N0 951 aaPredicted RBP3.52□□□□□ -1.85
LINC02540-201ENST00000455554 OVCH1Q7RTY7 1134 aa3.52□□□□□ -1.85
LINC02540-201ENST00000455554 ZBTB38Q8NAP3 1195 aaPredicted RBP3.52□□□□□ -1.85
LINC02540-201ENST00000455554 SLC7A14Q8TBB6 771 aa3.52□□□□□ -1.85
LINC02540-201ENST00000455554 NELL1Q92832 810 aa3.52□□□□□ -1.85
LINC02540-201ENST00000455554 MAML3Q96JK9 1138 aa3.52□□□□□ -1.85
LINC02540-201ENST00000455554 SLC46A2Q9BY10 475 aa3.52□□□□□ -1.85
LINC02540-201ENST00000455554 WDR11Q9BZH6 1224 aa3.52□□□□□ -1.85
LINC02540-201ENST00000455554 RSAD1Q9HA92 442 aa3.52□□□□□ -1.85
LINC02540-201ENST00000455554 EIF2B4Q9UI10 523 aaKnown RBP3.52□□□□□ -1.85
LINC02540-201ENST00000455554 DNAI1Q9UI46 699 aa3.52□□□□□ -1.85
LINC02540-201ENST00000455554 INSL6Q9Y581 213 aa3.52□□□□□ -1.85
LINC02540-201ENST00000455554 AHRRA9YTQ3 701 aa3.51□□□□□ -1.85
LINC02540-201ENST00000455554 MTSS1O43312 755 aa3.51□□□□□ -1.85
LINC02540-201ENST00000455554 TYRP1P17643 537 aa3.51□□□□□ -1.85
LINC02540-201ENST00000455554 KIR2DL3P43628 341 aa3.51□□□□□ -1.85
LINC02540-201ENST00000455554 FNTBP49356 437 aa3.51□□□□□ -1.85
LINC02540-201ENST00000455554 SSRP1Q08945 709 aaKnown RBP3.51□□□□□ -1.85
LINC02540-201ENST00000455554 IQSEC1Q6DN90 963 aa3.51□□□□□ -1.85
LINC02540-201ENST00000455554 CCDC62Q6P9F0 684 aa3.51□□□□□ -1.85
LINC02540-201ENST00000455554 BMP8AQ7Z5Y6 402 aa3.51□□□□□ -1.85
LINC02540-201ENST00000455554 LCORLQ8N3X6 602 aa3.51□□□□□ -1.85
LINC02540-201ENST00000455554 C2orf69Q8N8R5 385 aa3.51□□□□□ -1.85
LINC02540-201ENST00000455554 EXOC2Q96KP1 924 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms