RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 PLBD1Q6P4A8 553 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 GGT6Q6P531 493 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 LILRA6Q6PI73 481 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 KDELC2Q7Z4H8 507 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 MILR1Q7Z6M3 343 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 TMTC1Q8IUR5 882 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 CARNMT1Q8N4J0 409 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 FAM181AQ8N9Y4 354 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 CCDC191Q8NCU4 936 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 CHTF18Q8WVB6 975 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 ANP32BQ92688 251 aaKnown RBP5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 ASB2Q96Q27 587 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 TREX2Q9BQ50 279 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 KATNAL1Q9BW62 490 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 LGR4Q9BXB1 951 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 DEF6Q9H4E7 631 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 DMRT3Q9NQL9 472 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 ZNF277Q9NRM2 450 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 DIAPH3Q9NSV4 1193 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 ABCF3Q9NUQ8 709 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 GGA3Q9NZ52 723 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 EPS15L1Q9UBC2 864 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 MTRRQ9UBK8 725 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 RRP15Q9Y3B9 282 aaKnown RBP5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 SLC22A31A6NKX4 558 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 MASP2O00187 686 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 TNFRSF10CO14798 259 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 ADAMTS3O15072 1205 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 NCK2O43639 380 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 H2AFYO75367 372 aaKnown RBP5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 GLRX3O76003 335 aaKnown RBP5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 CRTAMO95727 393 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 HSPA4LO95757 839 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 WNT11O96014 354 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 PDE6CP51160 858 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 DRG2P55039 364 aaKnown RBP5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 DCAF7P61962 342 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 ETF1P62495 437 aaKnown RBP5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 MRPS35P82673 323 aaKnown RBP5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 HMGN5P82970 282 aaKnown RBP5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 KIAA2012Q0VF49 1180 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 ASIC2Q16515 512 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 CDC37L1Q7L3B6 337 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 MAMDC2Q7Z304 686 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 DENND1CQ8IV53 801 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 SYTL1Q8IYJ3 562 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 KRT78Q8N1N4 520 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 SLC5A5Q92911 643 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 TMEM120AQ9BXJ8 343 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 STK31Q9BXU1 1019 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 B3GNT5Q9BYG0 378 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 KRTAP4-9Q9BYQ8 210 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 CABP5Q9NP86 173 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 GRHPRQ9UBQ7 328 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 REV1Q9UBZ9 1251 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 ZNF112Q9UJU3 913 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 SLC13A4Q9UKG4 626 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 ZHX1Q9UKY1 873 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 CORO2BQ9UQ03 480 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 PCDHGB2Q9Y5G2 931 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 OAS3Q9Y6K5 1087 aaKnown RBP5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 U3KQE9 123 aa5.02□□□□□ -1.61
HMGB3P21-201ENST00000452483 FOXN3O00409 490 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 PES1O00541 588 aaKnown RBP5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 NOP56O00567 594 aaKnown RBP5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 SKAP2O75563 359 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 B3GALNT1O75752 331 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 LRIG2O94898 1065 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 STARD3NLO95772 234 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 TP53P04637 393 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 EPHX1P07099 455 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 PARP1P09874 1014 aaKnown RBP5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 STMN1P16949 149 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 RPL17P18621 184 aaKnown RBP5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 ANP32AP39687 249 aaKnown RBP5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 LIFRP42702 1097 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 SSR1P43307 286 aaKnown RBP5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 HSD17B7P56937 341 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 UBASH3AP57075 661 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 CDC16Q13042 620 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 POSTNQ15063 836 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 HSF5Q4G112 596 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 SLC30A6Q6NXT4 461 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 UNC5DQ6UXZ4 953 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 NFXL1Q6ZNB6 911 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 ARHGAP27Q6ZUM4 889 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 GALNTL5Q7Z4T8 443 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 PLD6Q8N2A8 252 aaKnown RBP5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 ANKRD52Q8NB46 1076 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 ZSCAN18Q8TBC5 510 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 ZNF507Q8TCN5 953 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 SSH3Q8TE77 659 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 ASB12Q8WXK4 309 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 TMEM169Q96HH4 297 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 TMEM41AQ96HV5 264 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 JAKMIP1Q96N16 626 aaKnown RBP5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 KRTAP4-2Q9BYR5 136 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 WNT10AQ9GZT5 417 aa5.01□□□□□ -1.61
HMGB3P21-201ENST00000452483 GRPEL1Q9HAV7 217 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms