RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 VPS39Q96JC1 886 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 ERP44Q9BS26 406 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 KIAA1683Q9H0B3 1180 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 HYPKQ9NX55 129 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 FNIP2Q9P278 1114 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 CLEC4AQ9UMR7 237 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 PCDHGB6Q9Y5F9 930 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 LAMC3Q9Y6N6 1575 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 CFAP65Q6ZU64 1925 aaKnown RBP5.75□□□□□ -1.49
PTPN4-203ENST00000430976 TTC41PQ6P2S7 1318 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 E2F8A0AVK6 867 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 ERICH2A1L162 156 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 SPDYE2BA6NHP3 402 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 SYCE1LA8MT33 242 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 HNRNPCL2B2RXH8 293 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 BACH1O14867 736 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 IKBKBO14920 756 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 SSX5O60225 188 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 HNRNPCL1O60812 293 aaKnown RBP5.75□□□□□ -1.49
PTPN4-203ENST00000430976 PRDM1O75626 825 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 UPP2O95045 317 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 SPDYE6P0CI01 402 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 TRIM23P36406 574 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 KCNJ5P48544 419 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 IL1RL1Q01638 556 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 TRIM28Q13263 835 aaKnown RBP5.75□□□□□ -1.49
PTPN4-203ENST00000430976 SPDYE2Q495Y8 402 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 DCAF17Q5H9S7 520 aaPredicted RBP5.75□□□□□ -1.49
PTPN4-203ENST00000430976 ALKBH5Q6P6C2 394 aaKnown RBP5.75□□□□□ -1.49
PTPN4-203ENST00000430976 CYP4V2Q6ZWL3 525 aaPredicted RBP5.75□□□□□ -1.49
PTPN4-203ENST00000430976 METTL3Q86U44 580 aaKnown RBP5.75□□□□□ -1.49
PTPN4-203ENST00000430976 ZBTB46Q86UZ6 589 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 OR8K1Q8NGG5 319 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 RIN3Q8TB24 985 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 CEP95Q96GE4 821 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 CARD6Q9BX69 1037 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 VCXQ9H320 206 aa5.75□□□□□ -1.49
PTPN4-203ENST00000430976 ASAP2O43150 1006 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 CCNT1O60563 726 aaKnown RBP5.74□□□□□ -1.49
PTPN4-203ENST00000430976 STARD3NLO95772 234 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 CPP00450 1065 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 CD86P42081 329 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 ARHGDIBP52566 201 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 USP46P62068 366 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 DMC1Q14565 340 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 MAPK6Q16659 721 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 ZNF554Q86TJ5 538 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 VPS37DQ86XT2 251 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 PDZD8Q8NEN9 1154 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 LZICQ8WZA0 190 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 COL26A1Q96A83 441 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 NLRP3Q96P20 1036 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 GAL3ST1Q99999 423 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 OSBPL1AQ9BXW6 950 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 OSGEPL1Q9H4B0 414 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 SH2D4AQ9H788 454 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 ARFGAP3Q9NP61 516 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 ALG13Q9NP73 1137 aaKnown RBP5.74□□□□□ -1.49
PTPN4-203ENST00000430976 GIMAP4Q9NUV9 329 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 WARS2Q9UGM6 360 aaKnown RBP5.74□□□□□ -1.49
PTPN4-203ENST00000430976 PHF24Q9UPV7 400 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 MRPL11Q9Y3B7 192 aaKnown RBP5.74□□□□□ -1.49
PTPN4-203ENST00000430976 TELO2Q9Y4R8 837 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 LACTBL1A8MY62 500 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 HIP1O00291 1037 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 GLRX3O76003 335 aaKnown RBP5.74□□□□□ -1.49
PTPN4-203ENST00000430976 LUC7L3O95232 432 aaKnown RBP5.74□□□□□ -1.49
PTPN4-203ENST00000430976 IFNA14P01570 189 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 ACY1Q03154 408 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 VPS72Q15906 364 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 ANO4Q32M45 955 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 ZBTB41Q5SVQ8 909 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 DSG4Q86SJ6 1040 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 PHC2Q8IXK0 858 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 OR6C4Q8NGE1 309 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 NSMCE1Q8WV22 266 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 ASZ1Q8WWH4 475 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 KAT2BQ92831 832 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 MPHOSPH9Q99550 1183 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 NDNQ99608 321 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 CNPY3Q9BT09 278 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 NAT10Q9H0A0 1025 aaKnown RBP5.74□□□□□ -1.49
PTPN4-203ENST00000430976 TRIM45Q9H8W5 580 aaPredicted RBP5.74□□□□□ -1.49
PTPN4-203ENST00000430976 KRT84Q9NSB2 600 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 HPF1Q9NWY4 346 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 ZMYND8Q9ULU4 1186 aaPredicted RBP5.74□□□□□ -1.49
PTPN4-203ENST00000430976 SNX8Q9Y5X2 465 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 SLC12A8A0AV02 714 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 GOLGA8BA8MQT2 603 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 E9PMD0 336 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 STRNO43815 780 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 RTN2O75298 545 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 CALM1P0DP23 149 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 CALM2P0DP24 149 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 CALM3P0DP25 149 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 ETV5P41161 510 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 HNF4AP41235 474 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 AKR1D1P51857 326 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 BPIFB4P59827 614 aa5.74□□□□□ -1.49
PTPN4-203ENST00000430976 TMPRSS15P98073 1019 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms