RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 TMEM132BQ14DG7 1078 aa4.7□□□□□ -1.66
TRAPPC13-203ENST00000415825 ACAP1Q15027 740 aa4.7□□□□□ -1.66
TRAPPC13-203ENST00000415825 DDB1Q16531 1140 aa4.7□□□□□ -1.66
TRAPPC13-203ENST00000415825 SP5Q6BEB4 398 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC13-203ENST00000415825 HTR3DQ70Z44 454 aa4.7□□□□□ -1.66
TRAPPC13-203ENST00000415825 APBB1IPQ7Z5R6 666 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC13-203ENST00000415825 CELF2-AS1Q8N7Q2 184 aa4.7□□□□□ -1.66
TRAPPC13-203ENST00000415825 PLA2G15Q8NCC3 412 aa4.7□□□□□ -1.66
TRAPPC13-203ENST00000415825 HNRNPLLQ8WVV9 542 aaKnown RBP4.7□□□□□ -1.66
TRAPPC13-203ENST00000415825 SPATA9Q9BWV2 254 aa4.7□□□□□ -1.66
TRAPPC13-203ENST00000415825 CBLCQ9ULV8 474 aa4.7□□□□□ -1.66
TRAPPC13-203ENST00000415825 HDAC5Q9UQL6 1122 aa4.7□□□□□ -1.66
TRAPPC13-203ENST00000415825 TOX4O94842 621 aa4.69□□□□□ -1.66
TRAPPC13-203ENST00000415825 HK1P19367 917 aa4.69□□□□□ -1.66
TRAPPC13-203ENST00000415825 CXCR5P32302 372 aa4.69□□□□□ -1.66
TRAPPC13-203ENST00000415825 KRTAP10-9P60411 292 aa4.69□□□□□ -1.66
TRAPPC13-203ENST00000415825 MXRA7P84157 204 aa4.69□□□□□ -1.66
TRAPPC13-203ENST00000415825 ROM1Q03395 351 aa4.69□□□□□ -1.66
TRAPPC13-203ENST00000415825 YOD1Q5VVQ6 348 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC13-203ENST00000415825 NAIF1Q69YI7 327 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC13-203ENST00000415825 CMTR2Q8IYT2 770 aaKnown RBP4.69□□□□□ -1.66
TRAPPC13-203ENST00000415825 SLC7A14Q8TBB6 771 aa4.69□□□□□ -1.66
TRAPPC13-203ENST00000415825 ZNF428Q96B54 188 aa4.69□□□□□ -1.66
TRAPPC13-203ENST00000415825 WDR92Q96MX6 357 aa4.69□□□□□ -1.66
TRAPPC13-203ENST00000415825 TRIM55Q9BYV6 548 aa4.69□□□□□ -1.66
TRAPPC13-203ENST00000415825 C14orf93Q9H972 538 aaKnown RBP4.69□□□□□ -1.66
TRAPPC13-203ENST00000415825 SYNPO2LQ9H987 977 aa4.69□□□□□ -1.66
TRAPPC13-203ENST00000415825 HS3ST4Q9Y661 456 aa4.69□□□□□ -1.66
TRAPPC13-203ENST00000415825 TRBV23-1A0A0A0MS06 115 aa4.68□□□□□ -1.66
TRAPPC13-203ENST00000415825 GOLGA6L22H0YM25 854 aa4.68□□□□□ -1.66
TRAPPC13-203ENST00000415825 RGS19P49795 217 aa4.68□□□□□ -1.66
TRAPPC13-203ENST00000415825 Q6YL49 198 aa4.68□□□□□ -1.66
TRAPPC13-203ENST00000415825 CISD2Q8N5K1 135 aaKnown RBP4.68□□□□□ -1.66
TRAPPC13-203ENST00000415825 MYEOVQ96EZ4 313 aa4.68□□□□□ -1.66
TRAPPC13-203ENST00000415825 FOXB1Q99853 325 aa4.68□□□□□ -1.66
TRAPPC13-203ENST00000415825 CPPED1Q9BRF8 314 aaPredicted RBP4.68□□□□□ -1.66
TRAPPC13-203ENST00000415825 SLC46A2Q9BY10 475 aa4.68□□□□□ -1.66
TRAPPC13-203ENST00000415825 SERHL2Q9H4I8 314 aa4.68□□□□□ -1.66
TRAPPC13-203ENST00000415825 SMURF1Q9HCE7 757 aa4.68□□□□□ -1.66
TRAPPC13-203ENST00000415825 C2orf78A6NCI8 922 aa4.67□□□□□ -1.66
TRAPPC13-203ENST00000415825 NRP1O14786 923 aa4.67□□□□□ -1.66
TRAPPC13-203ENST00000415825 HKR1P10072 659 aa4.67□□□□□ -1.66
TRAPPC13-203ENST00000415825 SDHAP31040 664 aa4.67□□□□□ -1.66
TRAPPC13-203ENST00000415825 BLOC1S1P78537 153 aa4.67□□□□□ -1.66
TRAPPC13-203ENST00000415825 ALDH6A1Q02252 535 aaKnown RBP4.67□□□□□ -1.66
TRAPPC13-203ENST00000415825 SPIDRQ14159 915 aa4.67□□□□□ -1.66
TRAPPC13-203ENST00000415825 MCF2L2Q86YR7 1114 aa4.67□□□□□ -1.66
TRAPPC13-203ENST00000415825 CMTM4Q8IZR5 234 aa4.67□□□□□ -1.66
TRAPPC13-203ENST00000415825 BOLLQ8N9W6 283 aaKnown RBP4.67□□□□□ -1.66
TRAPPC13-203ENST00000415825 GLB1L3Q8NCI6 653 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC13-203ENST00000415825 OR5AN1Q8NGI8 311 aa4.67□□□□□ -1.66
TRAPPC13-203ENST00000415825 CAGE1Q8TC20 777 aa4.67□□□□□ -1.66
TRAPPC13-203ENST00000415825 SLC9A6Q92581 669 aa4.67□□□□□ -1.66
TRAPPC13-203ENST00000415825 SLC29A3Q9BZD2 475 aa4.67□□□□□ -1.66
TRAPPC13-203ENST00000415825 R3HDMLQ9H3Y0 253 aa4.67□□□□□ -1.66
TRAPPC13-203ENST00000415825 KIAA1522Q9P206 1035 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC13-203ENST00000415825 MAGEL2Q9UJ55 1249 aa4.67□□□□□ -1.66
TRAPPC13-203ENST00000415825 SLC12A8A0AV02 714 aa4.66□□□□□ -1.66
TRAPPC13-203ENST00000415825 MYADML2A6NDP7 307 aa4.66□□□□□ -1.66
TRAPPC13-203ENST00000415825 RNASET2O00584 256 aaKnown RBP4.66□□□□□ -1.66
TRAPPC13-203ENST00000415825 EFCAB14O75071 495 aa4.66□□□□□ -1.66
TRAPPC13-203ENST00000415825 HLA-DOAP06340 250 aa4.66□□□□□ -1.66
TRAPPC13-203ENST00000415825 ZEB1P37275 1124 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC13-203ENST00000415825 RPGRQ92834 1020 aaKnown RBP4.66□□□□□ -1.66
TRAPPC13-203ENST00000415825 DYDC2Q96IM9 177 aa4.66□□□□□ -1.66
TRAPPC13-203ENST00000415825 COQ10AQ96MF6 247 aa4.66□□□□□ -1.66
TRAPPC13-203ENST00000415825 DCLRE1CQ96SD1 692 aaKnown RBP4.66□□□□□ -1.66
TRAPPC13-203ENST00000415825 WDR11Q9BZH6 1224 aa4.66□□□□□ -1.66
TRAPPC13-203ENST00000415825 KCNH6Q9H252 994 aa4.66□□□□□ -1.66
TRAPPC13-203ENST00000415825 POLR3BQ9NW08 1133 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC13-203ENST00000415825 KCMF1Q9P0J7 381 aa4.66□□□□□ -1.66
TRAPPC13-203ENST00000415825 ANKFY1Q9P2R3 1169 aa4.66□□□□□ -1.66
TRAPPC13-203ENST00000415825 TESQ9UGI8 421 aaKnown RBP4.66□□□□□ -1.66
TRAPPC13-203ENST00000415825 PCDHA9Q9Y5H5 950 aa4.66□□□□□ -1.66
TRAPPC13-203ENST00000415825 COL4A3Q01955 1670 aa4.65□□□□□ -1.66
TRAPPC13-203ENST00000415825 CENPVL1A0A0U1RR11 272 aa4.65□□□□□ -1.67
TRAPPC13-203ENST00000415825 KLF4O43474 513 aa4.65□□□□□ -1.67
TRAPPC13-203ENST00000415825 CRTAMO95727 393 aa4.65□□□□□ -1.67
TRAPPC13-203ENST00000415825 NR4A1P22736 598 aa4.65□□□□□ -1.67
TRAPPC13-203ENST00000415825 RAB33AQ14088 237 aa4.65□□□□□ -1.67
TRAPPC13-203ENST00000415825 SEC23AQ15436 765 aa4.65□□□□□ -1.67
TRAPPC13-203ENST00000415825 MAN2A1Q16706 1144 aa4.65□□□□□ -1.67
TRAPPC13-203ENST00000415825 MTERF2Q49AM1 385 aa4.65□□□□□ -1.67
TRAPPC13-203ENST00000415825 ZBTB38Q8NAP3 1195 aaPredicted RBP4.65□□□□□ -1.67
TRAPPC13-203ENST00000415825 MAGEB10Q96LZ2 347 aaPredicted RBP4.65□□□□□ -1.67
TRAPPC13-203ENST00000415825 BRIP1Q9BX63 1249 aa4.65□□□□□ -1.67
TRAPPC13-203ENST00000415825 TRPM5Q9NZQ8 1165 aa4.65□□□□□ -1.67
TRAPPC13-203ENST00000415825 B3GALT1Q9Y5Z6 326 aa4.65□□□□□ -1.67
TRAPPC13-203ENST00000415825 GAGE12BA1L429 117 aa4.64□□□□□ -1.67
TRAPPC13-203ENST00000415825 GAGE12HA6NDE8 117 aa4.64□□□□□ -1.67
TRAPPC13-203ENST00000415825 NPTXRO95502 500 aa4.64□□□□□ -1.67
TRAPPC13-203ENST00000415825 CLK3P49761 638 aaKnown RBP4.64□□□□□ -1.67
TRAPPC13-203ENST00000415825 SLC6A3Q01959 620 aa4.64□□□□□ -1.67
TRAPPC13-203ENST00000415825 GUCY1B3Q02153 619 aa4.64□□□□□ -1.67
TRAPPC13-203ENST00000415825 PRR16Q569H4 304 aa4.64□□□□□ -1.67
TRAPPC13-203ENST00000415825 ZC3H12BQ5HYM0 836 aaKnown RBP4.64□□□□□ -1.67
TRAPPC13-203ENST00000415825 SLFN12LQ6IEE8 588 aa4.64□□□□□ -1.67
TRAPPC13-203ENST00000415825 CCDC62Q6P9F0 684 aa4.64□□□□□ -1.67
TRAPPC13-203ENST00000415825 CLEC14AQ86T13 490 aa4.64□□□□□ -1.67
TRAPPC13-203ENST00000415825 FAM83AQ86UY5 434 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms