RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 HGSO14964 777 aaPredicted RBP11.48□□□□□ -0.57
SMC3-201ENST00000361804 TBCAO75347 108 aaKnown RBP11.48□□□□□ -0.57
SMC3-201ENST00000361804 ZNF76P36508 570 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 FAM186BQ8IYM0 893 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 ZNF713Q8N859 430 aaPredicted RBP11.48□□□□□ -0.57
SMC3-201ENST00000361804 DYDC2Q96IM9 177 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 SELENOSQ9BQE4 189 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 GPR88Q9GZN0 384 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 DNAJC17Q9NVM6 304 aaKnown RBP11.48□□□□□ -0.57
SMC3-201ENST00000361804 PTPN22Q9Y2R2 807 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 COL2A1P02458 1487 aaPredicted RBP11.48□□□□□ -0.57
SMC3-201ENST00000361804 GCFC2P16383 781 aaKnown RBP11.48□□□□□ -0.57
SMC3-201ENST00000361804 USP8P40818 1118 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 IFNAR2P48551 515 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 RINT1Q6NUQ1 792 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 HHIPL2Q6UWX4 724 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 FBXO25Q8TCJ0 367 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 HOOK2Q96ED9 719 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 PBKQ96KB5 322 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 MBOAT7Q96N66 472 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 MLXIPLQ9NP71 852 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 RABGAP1Q9Y3P9 1069 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 PTPRFP10586 1907 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 MYH11P35749 1972 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 ANKRD63C9JTQ0 380 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 DDX3YO15523 660 aaKnown RBP11.48□□□□□ -0.57
SMC3-201ENST00000361804 FGFR4P22455 802 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 RPA1P27694 616 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 KCNJ1P48048 391 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 PRELPP51888 382 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 PPP2R2AP63151 447 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 GPATCH4Q5T3I0 446 aaKnown RBP11.48□□□□□ -0.57
SMC3-201ENST00000361804 PHLDB2Q86SQ0 1253 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 CAMKK2Q96RR4 588 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 GMLQ99445 158 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 WDR18Q9BV38 432 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 EPB41L4BQ9H329 900 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 VAV3Q9UKW4 847 aa11.48□□□□□ -0.57
SMC3-201ENST00000361804 KIAA1217Q5T5P2 1943 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 TMEM150BA6NC51 233 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 FOXN3O00409 490 aaPredicted RBP11.47□□□□□ -0.57
SMC3-201ENST00000361804 TRAPPC3O43617 180 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 CFBP00751 764 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 ZYXQ15942 572 aaKnown RBP11.47□□□□□ -0.57
SMC3-201ENST00000361804 MKL1Q969V6 931 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 HES6Q96HZ4 224 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 SEC16BQ96JE7 1060 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 SLC40A1Q9NP59 571 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 TYW1Q9NV66 732 aaKnown RBP11.47□□□□□ -0.57
SMC3-201ENST00000361804 AMFRQ9UKV5 643 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 NENFQ9UMX5 172 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 A0A0G2JMZ2 1700 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 LRRC37A2A6NM11 1700 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 F5H6K3 240 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 NPR1P16066 1061 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 KLRC3Q07444 240 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 PHLDB3Q6NSJ2 640 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 SUGP1Q8IWZ8 645 aaKnown RBP11.47□□□□□ -0.57
SMC3-201ENST00000361804 RNF25Q96BH1 459 aaPredicted RBP11.47□□□□□ -0.57
SMC3-201ENST00000361804 CABS1Q96KC9 395 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 CCDC114Q96M63 670 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 IDI2Q9BXS1 227 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 CCDC113Q9H0I3 377 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 GOLGA6L7A0A1B0GV03 622 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 CALUO43852 315 aaPredicted RBP11.47□□□□□ -0.57
SMC3-201ENST00000361804 STAT1P42224 750 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 CRKP46108 304 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 POU5F1Q01860 360 aaKnown RBP11.47□□□□□ -0.57
SMC3-201ENST00000361804 CUL1Q13616 776 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 CERKLQ49MI3 558 aaPredicted RBP11.47□□□□□ -0.57
SMC3-201ENST00000361804 C6orf89Q6UWU4 347 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 FMO2Q99518 471 aa11.47□□□□□ -0.57
SMC3-201ENST00000361804 PDXKO00764 312 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 ECM2O94769 699 aaPredicted RBP11.46□□□□□ -0.57
SMC3-201ENST00000361804 FAM13AO94988 1023 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 FSBPO95073 299 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 ECE1P42892 770 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 IRX3P78415 501 aaPredicted RBP11.46□□□□□ -0.57
SMC3-201ENST00000361804 E2F5Q15329 346 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 PPP1R18Q6NYC8 613 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 CCDC174Q6PII3 467 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 OTUD6AQ7L8S5 288 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 SLFN11Q7Z7L1 901 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 EPS8L3Q8TE67 593 aaKnown RBP11.46□□□□□ -0.57
SMC3-201ENST00000361804 SEMA4AQ9H3S1 761 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 UTP11Q9Y3A2 253 aaKnown RBP11.46□□□□□ -0.57
SMC3-201ENST00000361804 NDUFB10O96000 172 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 SOX5P35711 763 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 PRKCIP41743 596 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 FMO5P49326 533 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 DR1Q01658 176 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 ICA1Q05084 483 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 ADCY1Q08828 1119 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 TTC27Q6P3X3 843 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 NSMFQ6X4W1 530 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 CCDC25Q86WR0 208 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 SLF2Q8IX21 1173 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 LRRC45Q96CN5 670 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 BORCS6Q96GS4 357 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 AZI2Q9H6S1 392 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms