RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 ZNF710Q8N1W2 664 aa18.54■□□□□ 0.56
DDX41-201ENST00000330503 SLC35F6Q8N357 371 aa18.54■□□□□ 0.56
DDX41-201ENST00000330503 MCPH1Q8NEM0 835 aa18.54■□□□□ 0.56
DDX41-201ENST00000330503 CEP89Q96ST8 783 aa18.54■□□□□ 0.56
DDX41-201ENST00000330503 HAUS4Q9H6D7 363 aa18.54■□□□□ 0.56
DDX41-201ENST00000330503 C17orf75Q9HAS0 396 aa18.54■□□□□ 0.56
DDX41-201ENST00000330503 KMT5AQ9NQR1 393 aa18.54■□□□□ 0.56
DDX41-201ENST00000330503 AIPL1Q9NZN9 384 aa18.54■□□□□ 0.56
DDX41-201ENST00000330503 DDX41Q9UJV9 622 aaKnown RBP18.54■□□□□ 0.56
DDX41-201ENST00000330503 ZNFX1Q9P2E3 1918 aaKnown RBP18.54■□□□□ 0.56
DDX41-201ENST00000330503 OATP04181 439 aa18.53■□□□□ 0.56
DDX41-201ENST00000330503 UCHL3P15374 230 aa18.53■□□□□ 0.56
DDX41-201ENST00000330503 FMO5P49326 533 aa18.53■□□□□ 0.56
DDX41-201ENST00000330503 KIF11P52732 1056 aa18.53■□□□□ 0.56
DDX41-201ENST00000330503 RTP1P59025 263 aa18.53■□□□□ 0.56
DDX41-201ENST00000330503 SNRPFP62306 86 aaKnown RBP18.53■□□□□ 0.56
DDX41-201ENST00000330503 PPP2R5AQ15172 486 aa18.53■□□□□ 0.56
DDX41-201ENST00000330503 SHCBP1Q8NEM2 672 aa18.53■□□□□ 0.56
DDX41-201ENST00000330503 MORC4Q8TE76 937 aa18.53■□□□□ 0.56
DDX41-201ENST00000330503 EFCC1Q9HA90 598 aa18.53■□□□□ 0.56
DDX41-201ENST00000330503 HSPBP1Q9NZL4 362 aa18.53■□□□□ 0.56
DDX41-201ENST00000330503 GUCA1BQ9UMX6 200 aa18.53■□□□□ 0.56
DDX41-201ENST00000330503 GGPS1O95749 300 aa18.53■□□□□ 0.56
DDX41-201ENST00000330503 TRIM49P0CI25 452 aa18.53■□□□□ 0.56
DDX41-201ENST00000330503 TRIM49CP0CI26 452 aa18.53■□□□□ 0.56
DDX41-201ENST00000330503 DMP1Q13316 513 aaPredicted RBP18.53■□□□□ 0.56
DDX41-201ENST00000330503 NIFKQ9BYG3 293 aaKnown RBP18.53■□□□□ 0.56
DDX41-201ENST00000330503 ATP6V0A4Q9HBG4 840 aa18.53■□□□□ 0.56
DDX41-201ENST00000330503 MYO1AQ9UBC5 1043 aa18.53■□□□□ 0.56
DDX41-201ENST00000330503 AJAP1Q9UKB5 411 aaPredicted RBP18.53■□□□□ 0.56
DDX41-201ENST00000330503 FHOD1Q9Y613 1164 aa18.53■□□□□ 0.56
DDX41-201ENST00000330503 SSU72P8A0A1W2PR75 194 aa18.52■□□□□ 0.56
DDX41-201ENST00000330503 DENND3A2RUS2 1198 aa18.52■□□□□ 0.56
DDX41-201ENST00000330503 BTBD19C9JJ37 291 aa18.52■□□□□ 0.56
DDX41-201ENST00000330503 SERPING1P05155 500 aa18.52■□□□□ 0.56
DDX41-201ENST00000330503 ADSSP30520 456 aa18.52■□□□□ 0.56
DDX41-201ENST00000330503 RBM10P98175 930 aaKnown RBP18.52■□□□□ 0.56
DDX41-201ENST00000330503 NCBP1Q09161 790 aaKnown RBP18.52■□□□□ 0.56
DDX41-201ENST00000330503 BFSP1Q12934 665 aa18.52■□□□□ 0.56
DDX41-201ENST00000330503 CBWD6Q4V339 395 aa18.52■□□□□ 0.56
DDX41-201ENST00000330503 CBWD3Q5JTY5 395 aa18.52■□□□□ 0.56
DDX41-201ENST00000330503 CBWD5Q5RIA9 395 aa18.52■□□□□ 0.56
DDX41-201ENST00000330503 KIAA1328Q86T90 577 aa18.52■□□□□ 0.56
DDX41-201ENST00000330503 MAP4K3Q8IVH8 894 aa18.52■□□□□ 0.56
DDX41-201ENST00000330503 JAKMIP2Q96AA8 810 aa18.52■□□□□ 0.56
DDX41-201ENST00000330503 HVCN1Q96D96 273 aa18.52■□□□□ 0.56
DDX41-201ENST00000330503 ERO1AQ96HE7 468 aa18.52■□□□□ 0.56
DDX41-201ENST00000330503 POLR3FQ9H1D9 316 aaPredicted RBP18.52■□□□□ 0.56
DDX41-201ENST00000330503 RRAGCQ9HB90 399 aa18.52■□□□□ 0.56
DDX41-201ENST00000330503 GCNT4Q9P109 453 aa18.52■□□□□ 0.56
DDX41-201ENST00000330503 PNMA3Q9UL41 463 aa18.52■□□□□ 0.56
DDX41-201ENST00000330503 PCDHA13Q9Y5I0 950 aa18.52■□□□□ 0.56
DDX41-201ENST00000330503 ADGRA3Q8IWK6 1321 aa18.52■□□□□ 0.56
DDX41-201ENST00000330503 PDHXO00330 501 aa18.52■□□□□ 0.55
DDX41-201ENST00000330503 CETPP11597 493 aa18.52■□□□□ 0.55
DDX41-201ENST00000330503 VAV2P52735 878 aa18.52■□□□□ 0.55
DDX41-201ENST00000330503 MKRN3Q13064 507 aaKnown RBP18.52■□□□□ 0.55
DDX41-201ENST00000330503 CCDC122Q5T0U0 273 aa18.52■□□□□ 0.55
DDX41-201ENST00000330503 WDR78Q5VTH9 848 aa18.52■□□□□ 0.55
DDX41-201ENST00000330503 METTL7BQ6UX53 244 aa18.52■□□□□ 0.55
DDX41-201ENST00000330503 IRF2BP2Q7Z5L9 587 aa18.52■□□□□ 0.55
DDX41-201ENST00000330503 XXYLT1Q8NBI6 393 aa18.52■□□□□ 0.55
DDX41-201ENST00000330503 BRI3BPQ8WY22 251 aa18.52■□□□□ 0.55
DDX41-201ENST00000330503 FBXL5Q9UKA1 691 aa18.52■□□□□ 0.55
DDX41-201ENST00000330503 MRFAP1Q9Y605 127 aa18.52■□□□□ 0.55
DDX41-201ENST00000330503 DUSP10Q9Y6W6 482 aa18.52■□□□□ 0.55
DDX41-201ENST00000330503 MCCD1P59942 119 aaPredicted RBP18.51■□□□□ 0.55
DDX41-201ENST00000330503 DLG4P78352 724 aa18.51■□□□□ 0.55
DDX41-201ENST00000330503 RAPGEF1Q13905 1077 aa18.51■□□□□ 0.55
DDX41-201ENST00000330503 EMC2Q15006 297 aa18.51■□□□□ 0.55
DDX41-201ENST00000330503 SPA17Q15506 151 aa18.51■□□□□ 0.55
DDX41-201ENST00000330503 SLC9C1Q4G0N8 1177 aa18.51■□□□□ 0.55
DDX41-201ENST00000330503 C1orf220Q5T0J3 134 aa18.51■□□□□ 0.55
DDX41-201ENST00000330503 SLC39A4Q6P5W5 647 aa18.51■□□□□ 0.55
DDX41-201ENST00000330503 GJB7Q6PEY0 223 aa18.51■□□□□ 0.55
DDX41-201ENST00000330503 GPRC5AQ8NFJ5 357 aa18.51■□□□□ 0.55
DDX41-201ENST00000330503 PLEKHO2Q8TD55 490 aa18.51■□□□□ 0.55
DDX41-201ENST00000330503 SEPT1Q8WYJ6 367 aa18.51■□□□□ 0.55
DDX41-201ENST00000330503 DHX33Q9H6R0 707 aaKnown RBP18.51■□□□□ 0.55
DDX41-201ENST00000330503 EXOC7Q9UPT5 735 aa18.51■□□□□ 0.55
DDX41-201ENST00000330503 SLC45A1Q9Y2W3 748 aa18.51■□□□□ 0.55
DDX41-201ENST00000330503 CCL15-CCL14A0A0B4J2E2 113 aa18.5■□□□□ 0.55
DDX41-201ENST00000330503 AKR1B10O60218 316 aa18.5■□□□□ 0.55
DDX41-201ENST00000330503 IPO7O95373 1038 aaKnown RBP18.5■□□□□ 0.55
DDX41-201ENST00000330503 GTF2A2P52657 109 aa18.5■□□□□ 0.55
DDX41-201ENST00000330503 TARBP2Q15633 366 aaKnown RBP18.5■□□□□ 0.55
DDX41-201ENST00000330503 CCL15Q16663 113 aa18.5■□□□□ 0.55
DDX41-201ENST00000330503 TAS1R3Q7RTX0 852 aa18.5■□□□□ 0.55
DDX41-201ENST00000330503 AFAP1L1Q8TED9 768 aa18.5■□□□□ 0.55
DDX41-201ENST00000330503 GTF3C2Q8WUA4 911 aaPredicted RBP18.5■□□□□ 0.55
DDX41-201ENST00000330503 MPHOSPH6Q99547 160 aaKnown RBP18.5■□□□□ 0.55
DDX41-201ENST00000330503 DEF6Q9H4E7 631 aa18.5■□□□□ 0.55
DDX41-201ENST00000330503 GBA2Q9HCG7 927 aaPredicted RBP18.5■□□□□ 0.55
DDX41-201ENST00000330503 MAPK13O15264 365 aa18.5■□□□□ 0.55
DDX41-201ENST00000330503 CNGA1P29973 690 aa18.5■□□□□ 0.55
DDX41-201ENST00000330503 TCF7P36402 384 aaPredicted RBP18.5■□□□□ 0.55
DDX41-201ENST00000330503 STAT5BP51692 787 aa18.5■□□□□ 0.55
DDX41-201ENST00000330503 JAM2P57087 298 aa18.5■□□□□ 0.55
DDX41-201ENST00000330503 FKBP1BP68106 108 aa18.5■□□□□ 0.55
DDX41-201ENST00000330503 CELF3Q5SZQ8 465 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms