RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 UBE4BO95155 1302 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 PDXKO00764 312 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 SLC16A4O15374 487 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 NPTX2P47972 431 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 POLGP54098 1239 aaPredicted RBP7.66□□□□□ -1.18
PTCD2-201ENST00000308077 FCGRTP55899 365 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 FKBP3Q00688 224 aaKnown RBP7.66□□□□□ -1.18
PTCD2-201ENST00000308077 ARID5BQ14865 1188 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 EDRF1Q3B7T1 1238 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 MIIPQ5JXC2 388 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 IQSEC1Q6DN90 963 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 FILIP1Q7Z7B0 1213 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 MCPH1Q8NEM0 835 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 ATP8B4Q8TF62 1192 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 KIFAP3Q92845 792 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 FAM167AQ96KS9 214 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 CTAGE1Q96RT6 745 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 KIFC3Q9BVG8 833 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 ST6GALNAC4Q9H4F1 302 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 NRBP2Q9NSY0 501 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 TYW1Q9NV66 732 aaKnown RBP7.66□□□□□ -1.18
PTCD2-201ENST00000308077 GNEQ9Y223 722 aaKnown RBP7.66□□□□□ -1.18
PTCD2-201ENST00000308077 ADGRA3Q8IWK6 1321 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 GOLGA6L6A8MZA4 724 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 N4BP3O15049 544 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 CLIC2O15247 247 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 MMP3P08254 477 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 ZNF286BP0CG31 522 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 HOXD8P13378 290 aaPredicted RBP7.66□□□□□ -1.18
PTCD2-201ENST00000308077 NR2F2P24468 414 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 IRX5P78411 483 aaPredicted RBP7.66□□□□□ -1.18
PTCD2-201ENST00000308077 GTF2BQ00403 316 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 NHLH1Q02575 133 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 TNFAIP2Q03169 654 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 DRP2Q13474 957 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 IRF5Q13568 498 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 TMEM31Q5JXX7 168 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 HAUS6Q7Z4H7 955 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 FAM114A1Q8IWE2 563 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 TMEM161BQ8NDZ6 487 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 OR6J1Q8NGC5 347 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 ASAP3Q8TDY4 903 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 TRAPPC12Q8WVT3 735 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 TMEM143Q96AN5 459 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 CEP63Q96MT8 703 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 TUBGCP2Q9BSJ2 902 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 C16orf70Q9BSU1 422 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 RNPEPQ9H4A4 650 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 SMARCAD1Q9H4L7 1026 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 MAGEC2Q9UBF1 373 aaPredicted RBP7.66□□□□□ -1.18
PTCD2-201ENST00000308077 PCDHB13Q9Y5F0 798 aa7.66□□□□□ -1.18
PTCD2-201ENST00000308077 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.66□□□□□ -1.18
PTCD2-201ENST00000308077 SPTBN5Q9NRC6 3674 aaKnown RBP7.65□□□□□ -1.18
PTCD2-201ENST00000308077 LGALS16A8MUM7 142 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 ESPNB1AK53 854 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 TISP43B9A030 160 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 CALUO43852 315 aaPredicted RBP7.65□□□□□ -1.18
PTCD2-201ENST00000308077 MAFO75444 373 aaPredicted RBP7.65□□□□□ -1.18
PTCD2-201ENST00000308077 NR3C1P04150 777 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 ARL2P36404 184 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 RFC5P40937 340 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 MTIF2P46199 727 aaKnown RBP7.65□□□□□ -1.18
PTCD2-201ENST00000308077 SLC26A2P50443 739 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 RTP1P59025 263 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 PRKCZQ05513 592 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 TBX2Q13207 712 aaPredicted RBP7.65□□□□□ -1.18
PTCD2-201ENST00000308077 DMP1Q13316 513 aaPredicted RBP7.65□□□□□ -1.18
PTCD2-201ENST00000308077 MKRN4PQ13434 485 aaPredicted RBP7.65□□□□□ -1.18
PTCD2-201ENST00000308077 ADAM9Q13443 819 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 FILIP1LQ4L180 1135 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 CEP135Q66GS9 1140 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 STXBP4Q6ZWJ1 553 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 TAS1R3Q7RTX0 852 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 REM2Q8IYK8 340 aaPredicted RBP7.65□□□□□ -1.18
PTCD2-201ENST00000308077 TRPV1Q8NER1 839 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 ANKRD20A12PQ8NF67 263 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 MAFAQ8NHW3 353 aaPredicted RBP7.65□□□□□ -1.18
PTCD2-201ENST00000308077 CACTINQ8WUQ7 758 aaKnown RBP7.65□□□□□ -1.18
PTCD2-201ENST00000308077 SPIRE2Q8WWL2 714 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 TRIB2Q92519 343 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 ZBTB10Q96DT7 871 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 GUCD1Q96NT3 240 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 NTPCRQ9BSD7 190 aaKnown RBP7.65□□□□□ -1.18
PTCD2-201ENST00000308077 CFHR5Q9BXR6 569 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 C17orf75Q9HAS0 396 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 KMT5AQ9NQR1 393 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 AGPAT3Q9NRZ7 376 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 RNF186Q9NXI6 227 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 IMPACTQ9P2X3 320 aa7.65□□□□□ -1.18
PTCD2-201ENST00000308077 IGKV6-21A0A0C4DH24 114 aa7.64□□□□□ -1.19
PTCD2-201ENST00000308077 CCDC169A6NNP5 214 aa7.64□□□□□ -1.19
PTCD2-201ENST00000308077 HBP1O60381 514 aa7.64□□□□□ -1.19
PTCD2-201ENST00000308077 TRPA1O75762 1119 aa7.64□□□□□ -1.19
PTCD2-201ENST00000308077 AKAP3O75969 853 aa7.64□□□□□ -1.19
PTCD2-201ENST00000308077 FGFR1OPO95684 399 aaKnown RBP7.64□□□□□ -1.19
PTCD2-201ENST00000308077 TPM3P06753 285 aa7.64□□□□□ -1.19
PTCD2-201ENST00000308077 XRCC5P13010 732 aaKnown RBP7.64□□□□□ -1.19
PTCD2-201ENST00000308077 GLRA2P23416 452 aa7.64□□□□□ -1.19
PTCD2-201ENST00000308077 CASP4P49662 377 aa7.64□□□□□ -1.19
PTCD2-201ENST00000308077 FLT3LGP49771 235 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms