RNA–Protein interactions for RNA: ENST00000560755.5

LRRC49-225, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 398 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-225ENST00000560755 CCNB3Q8WWL7 1395 aa13.29□□□□□ -0.28
LRRC49-225ENST00000560755 INO80Q9ULG1 1556 aaPredicted RBP13.28□□□□□ -0.28
LRRC49-225ENST00000560755 DNMT1P26358 1616 aaKnown RBP13.28□□□□□ -0.28
LRRC49-225ENST00000560755 KIAA1107Q9UPP5 1409 aa13.28□□□□□ -0.28
LRRC49-225ENST00000560755 SHANK2Q9UPX8 1470 aa13.28□□□□□ -0.28
LRRC49-225ENST00000560755 FYCO1Q9BQS8 1478 aa13.27□□□□□ -0.29
LRRC49-225ENST00000560755 POLR1AO95602 1720 aaPredicted RBP13.27□□□□□ -0.29
LRRC49-225ENST00000560755 ANKLE2Q86XL3 938 aa13.26□□□□□ -0.29
LRRC49-225ENST00000560755 TNRQ92752 1358 aa13.26□□□□□ -0.29
LRRC49-225ENST00000560755 ADGBQ8N7X0 1667 aa13.25□□□□□ -0.29
LRRC49-225ENST00000560755 FBXO31Q5XUX0 539 aaPredicted RBP13.25□□□□□ -0.29
LRRC49-225ENST00000560755 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.24□□□□□ -0.29
LRRC49-225ENST00000560755 NEURL4Q96JN8 1562 aa13.24□□□□□ -0.29
LRRC49-225ENST00000560755 MTUS2Q5JR59 1369 aa13.23□□□□□ -0.29
LRRC49-225ENST00000560755 KIF3BO15066 747 aa13.23□□□□□ -0.29
LRRC49-225ENST00000560755 THEMISQ8N1K5 641 aaPredicted RBP13.23□□□□□ -0.29
LRRC49-225ENST00000560755 ZNF644Q9H582 1327 aaPredicted RBP13.21□□□□□ -0.29
LRRC49-225ENST00000560755 WASHC2CQ9Y4E1 1318 aa13.21□□□□□ -0.29
LRRC49-225ENST00000560755 NPHP4O75161 1426 aaPredicted RBP13.21□□□□□ -0.3
LRRC49-225ENST00000560755 DHX29Q7Z478 1369 aaKnown RBP13.2□□□□□ -0.3
LRRC49-225ENST00000560755 VWDEQ8N2E2 1590 aa13.2□□□□□ -0.3
LRRC49-225ENST00000560755 FAM135AQ9P2D6 1515 aa13.19□□□□□ -0.3
LRRC49-225ENST00000560755 PZPP20742 1482 aa13.19□□□□□ -0.3
LRRC49-225ENST00000560755 UGGT1Q9NYU2 1555 aa13.19□□□□□ -0.3
LRRC49-225ENST00000560755 KDM5DQ9BY66 1539 aa13.18□□□□□ -0.3
LRRC49-225ENST00000560755 RTEL1-TNFRSF6BF6WH68 1400 aa13.18□□□□□ -0.3
LRRC49-225ENST00000560755 MIA2Q96PC5 1412 aa13.17□□□□□ -0.3
LRRC49-225ENST00000560755 NLRP1Q9C000 1473 aa13.16□□□□□ -0.3
LRRC49-225ENST00000560755 MBD5Q9P267 1494 aa13.16□□□□□ -0.3
LRRC49-225ENST00000560755 ALKQ9UM73 1620 aa13.15□□□□□ -0.3
LRRC49-225ENST00000560755 MED14O60244 1454 aa13.15□□□□□ -0.3
LRRC49-225ENST00000560755 TIAM1Q13009 1591 aa13.15□□□□□ -0.3
LRRC49-225ENST00000560755 IQGAP1P46940 1657 aa13.15□□□□□ -0.31
LRRC49-225ENST00000560755 DEPDC5O75140 1603 aa13.14□□□□□ -0.31
LRRC49-225ENST00000560755 LRRC7Q96NW7 1537 aa13.13□□□□□ -0.31
LRRC49-225ENST00000560755 RNF17Q9BXT8 1623 aaKnown RBP13.13□□□□□ -0.31
LRRC49-225ENST00000560755 CCDC141Q6ZP82 1450 aa13.12□□□□□ -0.31
LRRC49-225ENST00000560755 EHBP1L1Q8N3D4 1523 aa13.12□□□□□ -0.31
LRRC49-225ENST00000560755 SYNMO15061 1565 aa13.11□□□□□ -0.31
LRRC49-225ENST00000560755 STRCP1A6NGW2 1772 aa13.1□□□□□ -0.31
LRRC49-225ENST00000560755 TSPY4P0CV99 314 aa13.1□□□□□ -0.31
LRRC49-225ENST00000560755 TSPY10P0CW01 314 aa13.1□□□□□ -0.31
LRRC49-225ENST00000560755 RSPH4AQ5TD94 716 aa13.1□□□□□ -0.31
LRRC49-225ENST00000560755 RGS17Q9UGC6 210 aaPredicted RBP13.1□□□□□ -0.31
LRRC49-225ENST00000560755 CNKSR2Q8WXI2 1034 aa13.09□□□□□ -0.31
LRRC49-225ENST00000560755 CEP162Q5TB80 1403 aa13.08□□□□□ -0.32
LRRC49-225ENST00000560755 CAMSAP2Q08AD1 1489 aa13.08□□□□□ -0.32
LRRC49-225ENST00000560755 TXNDC2Q86VQ3 553 aa13.06□□□□□ -0.32
LRRC49-225ENST00000560755 POTEAQ6S8J7 498 aa13.05□□□□□ -0.32
LRRC49-225ENST00000560755 ERVK-7P63135 1459 aa13.04□□□□□ -0.32
LRRC49-225ENST00000560755 SCAF11Q99590 1463 aaKnown RBP13.04□□□□□ -0.32
LRRC49-225ENST00000560755 EID1Q9Y6B2 187 aa13.04□□□□□ -0.32
LRRC49-225ENST00000560755 NCOA2Q15596 1464 aa13.04□□□□□ -0.32
LRRC49-225ENST00000560755 ABCC3O15438 1527 aa13.03□□□□□ -0.32
LRRC49-225ENST00000560755 ZC3H13Q5T200 1668 aaKnown RBP13.03□□□□□ -0.32
LRRC49-225ENST00000560755 STAG3Q9UJ98 1225 aa13.02□□□□□ -0.33
LRRC49-225ENST00000560755 UBR1Q8IWV7 1749 aa13.02□□□□□ -0.33
LRRC49-225ENST00000560755 CFAP65Q6ZU64 1925 aaKnown RBP13.01□□□□□ -0.33
LRRC49-225ENST00000560755 LTKP29376 864 aa13.01□□□□□ -0.33
LRRC49-225ENST00000560755 ARHGEF5Q12774 1597 aa13.01□□□□□ -0.33
LRRC49-225ENST00000560755 FAM135BQ49AJ0 1406 aa13□□□□□ -0.33
LRRC49-225ENST00000560755 CEP152O94986 1710 aa12.99□□□□□ -0.33
LRRC49-225ENST00000560755 HOXD11P31277 338 aaPredicted RBP12.99□□□□□ -0.33
LRRC49-225ENST00000560755 TMEM94Q12767 1356 aa12.98□□□□□ -0.33
LRRC49-225ENST00000560755 XIRP1Q702N8 1843 aaKnown RBP12.98□□□□□ -0.33
LRRC49-225ENST00000560755 PROSER2Q86WR7 435 aaPredicted RBP12.98□□□□□ -0.33
LRRC49-225ENST00000560755 RBM33Q96EV2 1170 aaKnown RBP12.97□□□□□ -0.33
LRRC49-225ENST00000560755 EIF2AK4Q9P2K8 1649 aaKnown RBP12.97□□□□□ -0.33
LRRC49-225ENST00000560755 SLIT1O75093 1534 aa12.97□□□□□ -0.33
LRRC49-225ENST00000560755 ARHGAP23Q9P227 1491 aa12.97□□□□□ -0.33
LRRC49-225ENST00000560755 BCANQ96GW7 911 aa12.96□□□□□ -0.33
LRRC49-225ENST00000560755 ROBO1Q9Y6N7 1651 aa12.96□□□□□ -0.34
LRRC49-225ENST00000560755 DCAF8L1A6NGE4 600 aa12.95□□□□□ -0.34
LRRC49-225ENST00000560755 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.95□□□□□ -0.34
LRRC49-225ENST00000560755 SETD1AO15047 1707 aaKnown RBP12.95□□□□□ -0.34
LRRC49-225ENST00000560755 MAST1Q9Y2H9 1570 aa12.94□□□□□ -0.34
LRRC49-225ENST00000560755 KCNA6P17658 529 aa12.94□□□□□ -0.34
LRRC49-225ENST00000560755 SLC26A8Q96RN1 970 aa12.94□□□□□ -0.34
LRRC49-225ENST00000560755 MROH1Q8NDA8 1641 aa12.94□□□□□ -0.34
LRRC49-225ENST00000560755 TMEM2Q9UHN6 1383 aa12.94□□□□□ -0.34
LRRC49-225ENST00000560755 LRRC9Q6ZRR7 1453 aa12.93□□□□□ -0.34
LRRC49-225ENST00000560755 RNF216Q9NWF9 866 aaPredicted RBP12.93□□□□□ -0.34
LRRC49-225ENST00000560755 PIK3C2BO00750 1634 aa12.92□□□□□ -0.34
LRRC49-225ENST00000560755 MEX3CQ5U5Q3 659 aaKnown RBP12.92□□□□□ -0.34
LRRC49-225ENST00000560755 DUOX2Q9NRD8 1548 aa12.92□□□□□ -0.34
LRRC49-225ENST00000560755 MSH6P52701 1360 aa12.92□□□□□ -0.34
LRRC49-225ENST00000560755 JCADQ9P266 1359 aa12.92□□□□□ -0.34
LRRC49-225ENST00000560755 ARHGAP31Q2M1Z3 1444 aa12.91□□□□□ -0.34
LRRC49-225ENST00000560755 PHLPP1O60346 1717 aa12.91□□□□□ -0.34
LRRC49-225ENST00000560755 TRIM52Q96A61 297 aa12.9□□□□□ -0.34
LRRC49-225ENST00000560755 KANK1Q14678 1352 aa12.9□□□□□ -0.34
LRRC49-225ENST00000560755 MAP3K1Q13233 1512 aa12.89□□□□□ -0.35
LRRC49-225ENST00000560755 EFCAB6Q5THR3 1501 aa12.89□□□□□ -0.35
LRRC49-225ENST00000560755 NCBP3Q53F19 620 aaKnown RBP12.89□□□□□ -0.35
LRRC49-225ENST00000560755 RRP7BPQ9NSQ0 103 aa12.89□□□□□ -0.35
LRRC49-225ENST00000560755 SLAIN2Q9P270 581 aa12.89□□□□□ -0.35
LRRC49-225ENST00000560755 KIF15Q9NS87 1388 aa12.89□□□□□ -0.35
LRRC49-225ENST00000560755 PRDM15P57071 1507 aaPredicted RBP12.88□□□□□ -0.35
LRRC49-225ENST00000560755 IDI1Q13907 227 aa12.88□□□□□ -0.35
LRRC49-225ENST00000560755 MYOM3Q5VTT5 1437 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms