RNA–Protein interactions for RNA: ENST00000533316.1

ATG13-220, Transcript of autophagy related 13, humanhuman

TSL 2

Gene ATG13, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-220ENST00000533316 ADGBQ8N7X0 1667 aa16.45■□□□□ 0.22
ATG13-220ENST00000533316 DHX29Q7Z478 1369 aaKnown RBP16.43■□□□□ 0.22
ATG13-220ENST00000533316 TNRQ92752 1358 aa16.43■□□□□ 0.22
ATG13-220ENST00000533316 NEURL4Q96JN8 1562 aa16.43■□□□□ 0.22
ATG13-220ENST00000533316 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.42■□□□□ 0.22
ATG13-220ENST00000533316 SHANK2Q9UPX8 1470 aa16.4■□□□□ 0.22
ATG13-220ENST00000533316 MED1Q15648 1581 aaPredicted RBP16.39■□□□□ 0.21
ATG13-220ENST00000533316 WASHC2CQ9Y4E1 1318 aa16.39■□□□□ 0.21
ATG13-220ENST00000533316 POLR1AO95602 1720 aaPredicted RBP16.39■□□□□ 0.21
ATG13-220ENST00000533316 TOM1O60784 492 aa16.38■□□□□ 0.21
ATG13-220ENST00000533316 RTEL1-TNFRSF6BF6WH68 1400 aa16.37■□□□□ 0.21
ATG13-220ENST00000533316 ANKLE2Q86XL3 938 aa16.37■□□□□ 0.21
ATG13-220ENST00000533316 PZPP20742 1482 aa16.36■□□□□ 0.21
ATG13-220ENST00000533316 EHBP1L1Q8N3D4 1523 aa16.36■□□□□ 0.21
ATG13-220ENST00000533316 CEP162Q5TB80 1403 aa16.36■□□□□ 0.21
ATG13-220ENST00000533316 KDM5DQ9BY66 1539 aa16.35■□□□□ 0.21
ATG13-220ENST00000533316 VWDEQ8N2E2 1590 aa16.35■□□□□ 0.21
ATG13-220ENST00000533316 CAMSAP2Q08AD1 1489 aa16.35■□□□□ 0.21
ATG13-220ENST00000533316 CCDC141Q6ZP82 1450 aa16.35■□□□□ 0.21
ATG13-220ENST00000533316 CPS1P31327 1500 aa16.35■□□□□ 0.21
ATG13-220ENST00000533316 ALKQ9UM73 1620 aa16.34■□□□□ 0.21
ATG13-220ENST00000533316 MIA2Q96PC5 1412 aa16.34■□□□□ 0.21
ATG13-220ENST00000533316 NPHP4O75161 1426 aaPredicted RBP16.33■□□□□ 0.2
ATG13-220ENST00000533316 NCOA2Q15596 1464 aa16.33■□□□□ 0.2
ATG13-220ENST00000533316 THEMISQ8N1K5 641 aaPredicted RBP16.32■□□□□ 0.2
ATG13-220ENST00000533316 UGGT1Q9NYU2 1555 aa16.31■□□□□ 0.2
ATG13-220ENST00000533316 PHF23Q9BUL5 403 aaPredicted RBP16.3■□□□□ 0.2
ATG13-220ENST00000533316 STRCP1A6NGW2 1772 aa16.3■□□□□ 0.2
ATG13-220ENST00000533316 FAM135AQ9P2D6 1515 aa16.29■□□□□ 0.2
ATG13-220ENST00000533316 NLRP1Q9C000 1473 aa16.28■□□□□ 0.2
ATG13-220ENST00000533316 CFAP65Q6ZU64 1925 aaKnown RBP16.27■□□□□ 0.2
ATG13-220ENST00000533316 TSPY4P0CV99 314 aa16.27■□□□□ 0.2
ATG13-220ENST00000533316 TSPY10P0CW01 314 aa16.27■□□□□ 0.2
ATG13-220ENST00000533316 MED14O60244 1454 aa16.27■□□□□ 0.19
ATG13-220ENST00000533316 LRRC7Q96NW7 1537 aa16.26■□□□□ 0.19
ATG13-220ENST00000533316 IQGAP1P46940 1657 aa16.26■□□□□ 0.19
ATG13-220ENST00000533316 ABCC3O15438 1527 aa16.24■□□□□ 0.19
ATG13-220ENST00000533316 DEPDC5O75140 1603 aa16.24■□□□□ 0.19
ATG13-220ENST00000533316 RSPH4AQ5TD94 716 aa16.24■□□□□ 0.19
ATG13-220ENST00000533316 ERVK-7P63135 1459 aa16.22■□□□□ 0.19
ATG13-220ENST00000533316 ARHGEF5Q12774 1597 aa16.22■□□□□ 0.19
ATG13-220ENST00000533316 LTKP29376 864 aa16.21■□□□□ 0.19
ATG13-220ENST00000533316 RNF17Q9BXT8 1623 aaKnown RBP16.2■□□□□ 0.18
ATG13-220ENST00000533316 KANK4Q5T7N3 995 aaPredicted RBP16.2■□□□□ 0.18
ATG13-220ENST00000533316 RGS17Q9UGC6 210 aaPredicted RBP16.2■□□□□ 0.18
ATG13-220ENST00000533316 CEP152O94986 1710 aa16.19■□□□□ 0.18
ATG13-220ENST00000533316 MROH1Q8NDA8 1641 aa16.19■□□□□ 0.18
ATG13-220ENST00000533316 TXNDC2Q86VQ3 553 aa16.18■□□□□ 0.18
ATG13-220ENST00000533316 ZC3H13Q5T200 1668 aaKnown RBP16.18■□□□□ 0.18
ATG13-220ENST00000533316 UBR1Q8IWV7 1749 aa16.16■□□□□ 0.18
ATG13-220ENST00000533316 LOC105371045A0A1W2PR82 267 aa16.16■□□□□ 0.18
ATG13-220ENST00000533316 RBM33Q96EV2 1170 aaKnown RBP16.16■□□□□ 0.18
ATG13-220ENST00000533316 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.16■□□□□ 0.18
ATG13-220ENST00000533316 LRRC9Q6ZRR7 1453 aa16.16■□□□□ 0.18
ATG13-220ENST00000533316 SCAF11Q99590 1463 aaKnown RBP16.16■□□□□ 0.18
ATG13-220ENST00000533316 MAST1Q9Y2H9 1570 aa16.14■□□□□ 0.17
ATG13-220ENST00000533316 RRP7BPQ9NSQ0 103 aa16.14■□□□□ 0.17
ATG13-220ENST00000533316 SYNMO15061 1565 aa16.13■□□□□ 0.17
ATG13-220ENST00000533316 XIRP1Q702N8 1843 aaKnown RBP16.13■□□□□ 0.17
ATG13-220ENST00000533316 EIF2AK4Q9P2K8 1649 aaKnown RBP16.12■□□□□ 0.17
ATG13-220ENST00000533316 ARHGAP23Q9P227 1491 aa16.1■□□□□ 0.17
ATG13-220ENST00000533316 POTEAQ6S8J7 498 aa16.09■□□□□ 0.17
ATG13-220ENST00000533316 SLC26A8Q96RN1 970 aa16.09■□□□□ 0.17
ATG13-220ENST00000533316 EID1Q9Y6B2 187 aa16.09■□□□□ 0.17
ATG13-220ENST00000533316 KIF15Q9NS87 1388 aa16.09■□□□□ 0.17
ATG13-220ENST00000533316 MYOM3Q5VTT5 1437 aa16.09■□□□□ 0.17
ATG13-220ENST00000533316 VPS8Q8N3P4 1428 aa16.09■□□□□ 0.17
ATG13-220ENST00000533316 SLIT1O75093 1534 aa16.09■□□□□ 0.17
ATG13-220ENST00000533316 DUOX2Q9NRD8 1548 aa16.09■□□□□ 0.17
ATG13-220ENST00000533316 PIK3C2BO00750 1634 aa16.08■□□□□ 0.17
ATG13-220ENST00000533316 STAG3Q9UJ98 1225 aa16.08■□□□□ 0.16
ATG13-220ENST00000533316 TMEM94Q12767 1356 aa16.07■□□□□ 0.16
ATG13-220ENST00000533316 ABCC5O15440 1437 aa16.06■□□□□ 0.16
ATG13-220ENST00000533316 TMEM2Q9UHN6 1383 aa16.06■□□□□ 0.16
ATG13-220ENST00000533316 IDI1Q13907 227 aa16.06■□□□□ 0.16
ATG13-220ENST00000533316 CHIC2Q9UKJ5 165 aa16.06■□□□□ 0.16
ATG13-220ENST00000533316 PROSER2Q86WR7 435 aaPredicted RBP16.05■□□□□ 0.16
ATG13-220ENST00000533316 ARHGAP31Q2M1Z3 1444 aa16.04■□□□□ 0.16
ATG13-220ENST00000533316 PRDM15P57071 1507 aaPredicted RBP16.04■□□□□ 0.16
ATG13-220ENST00000533316 FAM135BQ49AJ0 1406 aa16.02■□□□□ 0.16
ATG13-220ENST00000533316 KCNA6P17658 529 aa16.02■□□□□ 0.16
ATG13-220ENST00000533316 BCANQ96GW7 911 aa16.01■□□□□ 0.15
ATG13-220ENST00000533316 ROBO1Q9Y6N7 1651 aa16.01■□□□□ 0.15
ATG13-220ENST00000533316 ERBINQ96RT1 1412 aa16.01■□□□□ 0.15
ATG13-220ENST00000533316 MAP3K1Q13233 1512 aa16■□□□□ 0.15
ATG13-220ENST00000533316 EFCAB6Q5THR3 1501 aa16■□□□□ 0.15
ATG13-220ENST00000533316 CROCC2H7BZ55 1655 aa15.99■□□□□ 0.15
ATG13-220ENST00000533316 PTPN23Q9H3S7 1636 aa15.99■□□□□ 0.15
ATG13-220ENST00000533316 DAPK1P53355 1430 aa15.99■□□□□ 0.15
ATG13-220ENST00000533316 TET3O43151 1660 aa15.99■□□□□ 0.15
ATG13-220ENST00000533316 KANK1Q14678 1352 aa15.98■□□□□ 0.15
ATG13-220ENST00000533316 SETD1AO15047 1707 aaKnown RBP15.97■□□□□ 0.15
ATG13-220ENST00000533316 SLAIN2Q9P270 581 aa15.94■□□□□ 0.14
ATG13-220ENST00000533316 NOS1P29475 1434 aa15.94■□□□□ 0.14
ATG13-220ENST00000533316 NUTM2DQ5VT03 806 aaPredicted RBP15.93■□□□□ 0.14
ATG13-220ENST00000533316 LMTK2Q8IWU2 1503 aa15.93■□□□□ 0.14
ATG13-220ENST00000533316 MSH6P52701 1360 aa15.92■□□□□ 0.14
ATG13-220ENST00000533316 ANKRD30AQ9BXX3 1397 aa15.92■□□□□ 0.14
ATG13-220ENST00000533316 ADGRB3O60242 1522 aa15.92■□□□□ 0.14
ATG13-220ENST00000533316 FGD6Q6ZV73 1430 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms