RNA–Protein interactions for RNA: ENST00000512925.1

PFDN1-205, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 900 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-205ENST00000512925 PIP4K2BP78356 416 aa17.01■□□□□ 0.31
PFDN1-205ENST00000512925 CNKSR2Q8WXI2 1034 aa17.01■□□□□ 0.31
PFDN1-205ENST00000512925 MED1Q15648 1581 aaPredicted RBP17.01■□□□□ 0.31
PFDN1-205ENST00000512925 ZNF644Q9H582 1327 aaPredicted RBP17■□□□□ 0.31
PFDN1-205ENST00000512925 TOM1O60784 492 aa17■□□□□ 0.31
PFDN1-205ENST00000512925 FBXO31Q5XUX0 539 aaPredicted RBP17■□□□□ 0.31
PFDN1-205ENST00000512925 CCNB3Q8WWL7 1395 aa17■□□□□ 0.31
PFDN1-205ENST00000512925 MBD5Q9P267 1494 aa16.99■□□□□ 0.31
PFDN1-205ENST00000512925 SHANK2Q9UPX8 1470 aa16.99■□□□□ 0.31
PFDN1-205ENST00000512925 NEURL4Q96JN8 1562 aa16.98■□□□□ 0.31
PFDN1-205ENST00000512925 CPS1P31327 1500 aa16.98■□□□□ 0.31
PFDN1-205ENST00000512925 DHX29Q7Z478 1369 aaKnown RBP16.97■□□□□ 0.31
PFDN1-205ENST00000512925 TNRQ92752 1358 aa16.96■□□□□ 0.31
PFDN1-205ENST00000512925 RTEL1-TNFRSF6BF6WH68 1400 aa16.96■□□□□ 0.3
PFDN1-205ENST00000512925 ADGBQ8N7X0 1667 aa16.95■□□□□ 0.3
PFDN1-205ENST00000512925 ALKQ9UM73 1620 aa16.94■□□□□ 0.3
PFDN1-205ENST00000512925 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.93■□□□□ 0.31e-20■■■■■ 166.9
PFDN1-205ENST00000512925 ANKLE2Q86XL3 938 aa16.93■□□□□ 0.3
PFDN1-205ENST00000512925 VWDEQ8N2E2 1590 aa16.93■□□□□ 0.3
PFDN1-205ENST00000512925 PZPP20742 1482 aa16.93■□□□□ 0.3
PFDN1-205ENST00000512925 MTUS2Q5JR59 1369 aa16.92■□□□□ 0.3
PFDN1-205ENST00000512925 KIF3BO15066 747 aa16.92■□□□□ 0.3
PFDN1-205ENST00000512925 THEMISQ8N1K5 641 aaPredicted RBP16.91■□□□□ 0.3
PFDN1-205ENST00000512925 POLR1AO95602 1720 aaPredicted RBP16.9■□□□□ 0.3
PFDN1-205ENST00000512925 MIA2Q96PC5 1412 aa16.9■□□□□ 0.3
PFDN1-205ENST00000512925 MED14O60244 1454 aa16.9■□□□□ 0.3
PFDN1-205ENST00000512925 TIAM1Q13009 1591 aa16.89■□□□□ 0.3
PFDN1-205ENST00000512925 NPHP4O75161 1426 aaPredicted RBP16.88■□□□□ 0.29
PFDN1-205ENST00000512925 WASHC2CQ9Y4E1 1318 aa16.88■□□□□ 0.29
PFDN1-205ENST00000512925 KDM5DQ9BY66 1539 aa16.87■□□□□ 0.29
PFDN1-205ENST00000512925 NLRP1Q9C000 1473 aa16.86■□□□□ 0.29
PFDN1-205ENST00000512925 FAM135AQ9P2D6 1515 aa16.86■□□□□ 0.29
PFDN1-205ENST00000512925 CEP162Q5TB80 1403 aa16.85■□□□□ 0.29
PFDN1-205ENST00000512925 UGGT1Q9NYU2 1555 aa16.85■□□□□ 0.29
PFDN1-205ENST00000512925 DEPDC5O75140 1603 aa16.85■□□□□ 0.29
PFDN1-205ENST00000512925 NCBP3Q53F19 620 aaKnown RBP16.83■□□□□ 0.28
PFDN1-205ENST00000512925 LRRC7Q96NW7 1537 aa16.83■□□□□ 0.28
PFDN1-205ENST00000512925 CCDC141Q6ZP82 1450 aa16.82■□□□□ 0.28
PFDN1-205ENST00000512925 RSPH4AQ5TD94 716 aa16.82■□□□□ 0.28
PFDN1-205ENST00000512925 EHBP1L1Q8N3D4 1523 aa16.81■□□□□ 0.28
PFDN1-205ENST00000512925 RGS17Q9UGC6 210 aaPredicted RBP16.81■□□□□ 0.28
PFDN1-205ENST00000512925 STRCP1A6NGW2 1772 aa16.8■□□□□ 0.28
PFDN1-205ENST00000512925 HOXD11P31277 338 aaPredicted RBP16.8■□□□□ 0.28
PFDN1-205ENST00000512925 CAMSAP2Q08AD1 1489 aa16.79■□□□□ 0.28
PFDN1-205ENST00000512925 IQGAP1P46940 1657 aa16.78■□□□□ 0.28
PFDN1-205ENST00000512925 RNF216Q9NWF9 866 aaPredicted RBP16.77■□□□□ 0.28
PFDN1-205ENST00000512925 NCOA2Q15596 1464 aa16.75■□□□□ 0.27
PFDN1-205ENST00000512925 ABCC3O15438 1527 aa16.75■□□□□ 0.27
PFDN1-205ENST00000512925 RNF17Q9BXT8 1623 aaKnown RBP16.74■□□□□ 0.27
PFDN1-205ENST00000512925 TSPY4P0CV99 314 aa16.74■□□□□ 0.27
PFDN1-205ENST00000512925 TSPY10P0CW01 314 aa16.74■□□□□ 0.27
PFDN1-205ENST00000512925 ERVK-7P63135 1459 aa16.73■□□□□ 0.27
PFDN1-205ENST00000512925 DCAF8L1A6NGE4 600 aa16.73■□□□□ 0.27
PFDN1-205ENST00000512925 LTKP29376 864 aa16.73■□□□□ 0.27
PFDN1-205ENST00000512925 SYNMO15061 1565 aa16.72■□□□□ 0.27
PFDN1-205ENST00000512925 ARHGEF5Q12774 1597 aa16.72■□□□□ 0.27
PFDN1-205ENST00000512925 ZC3H13Q5T200 1668 aaKnown RBP16.72■□□□□ 0.27
PFDN1-205ENST00000512925 SCAF11Q99590 1463 aaKnown RBP16.69■□□□□ 0.26
PFDN1-205ENST00000512925 ARHGAP23Q9P227 1491 aa16.68■□□□□ 0.26
PFDN1-205ENST00000512925 MROH1Q8NDA8 1641 aa16.68■□□□□ 0.26
PFDN1-205ENST00000512925 TXNDC2Q86VQ3 553 aa16.68■□□□□ 0.26
PFDN1-205ENST00000512925 POTEAQ6S8J7 498 aa16.67■□□□□ 0.26
PFDN1-205ENST00000512925 FAM135BQ49AJ0 1406 aa16.67■□□□□ 0.26
PFDN1-205ENST00000512925 UBR1Q8IWV7 1749 aa16.67■□□□□ 0.26
PFDN1-205ENST00000512925 SLIT1O75093 1534 aa16.66■□□□□ 0.26
PFDN1-205ENST00000512925 MAST1Q9Y2H9 1570 aa16.65■□□□□ 0.26
PFDN1-205ENST00000512925 XIRP1Q702N8 1843 aaKnown RBP16.64■□□□□ 0.25
PFDN1-205ENST00000512925 KCNA4P22459 653 aa16.64■□□□□ 0.25
PFDN1-205ENST00000512925 EIF2AK4Q9P2K8 1649 aaKnown RBP16.63■□□□□ 0.25
PFDN1-205ENST00000512925 ARHGAP31Q2M1Z3 1444 aa16.62■□□□□ 0.25
PFDN1-205ENST00000512925 TMEM94Q12767 1356 aa16.61■□□□□ 0.25
PFDN1-205ENST00000512925 NPM3O75607 178 aaKnown RBP16.6■□□□□ 0.25
PFDN1-205ENST00000512925 EID1Q9Y6B2 187 aa16.6■□□□□ 0.25
PFDN1-205ENST00000512925 TMEM2Q9UHN6 1383 aa16.6■□□□□ 0.25
PFDN1-205ENST00000512925 CEP152O94986 1710 aa16.59■□□□□ 0.25
PFDN1-205ENST00000512925 LRRC9Q6ZRR7 1453 aa16.59■□□□□ 0.25
PFDN1-205ENST00000512925 KCNA6P17658 529 aa16.58■□□□□ 0.24
PFDN1-205ENST00000512925 CFAP65Q6ZU64 1925 aaKnown RBP16.58■□□□□ 0.24
PFDN1-205ENST00000512925 DUOX2Q9NRD8 1548 aa16.57■□□□□ 0.24
PFDN1-205ENST00000512925 RBM33Q96EV2 1170 aaKnown RBP16.57■□□□□ 0.24
PFDN1-205ENST00000512925 KANK4Q5T7N3 995 aaPredicted RBP16.56■□□□□ 0.24
PFDN1-205ENST00000512925 MAP3K1Q13233 1512 aa16.55■□□□□ 0.24
PFDN1-205ENST00000512925 IDI1Q13907 227 aa16.55■□□□□ 0.24
PFDN1-205ENST00000512925 PRDM15P57071 1507 aaPredicted RBP16.55■□□□□ 0.24
PFDN1-205ENST00000512925 TET3O43151 1660 aa16.54■□□□□ 0.24
PFDN1-205ENST00000512925 PROSER2Q86WR7 435 aaPredicted RBP16.54■□□□□ 0.24
PFDN1-205ENST00000512925 SLC26A8Q96RN1 970 aa16.54■□□□□ 0.24
PFDN1-205ENST00000512925 PIK3C2BO00750 1634 aa16.54■□□□□ 0.24
PFDN1-205ENST00000512925 MYOM3Q5VTT5 1437 aa16.53■□□□□ 0.24
PFDN1-205ENST00000512925 KIF15Q9NS87 1388 aa16.53■□□□□ 0.24
PFDN1-205ENST00000512925 ROBO1Q9Y6N7 1651 aa16.53■□□□□ 0.24
PFDN1-205ENST00000512925 RRP7BPQ9NSQ0 103 aa16.52■□□□□ 0.24
PFDN1-205ENST00000512925 ERBINQ96RT1 1412 aa16.52■□□□□ 0.23
PFDN1-205ENST00000512925 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.51■□□□□ 0.23
PFDN1-205ENST00000512925 STAG3Q9UJ98 1225 aa16.51■□□□□ 0.23
PFDN1-205ENST00000512925 EFCAB6Q5THR3 1501 aa16.5■□□□□ 0.23
PFDN1-205ENST00000512925 ABCC5O15440 1437 aa16.5■□□□□ 0.23
PFDN1-205ENST00000512925 SLAIN2Q9P270 581 aa16.49■□□□□ 0.23
PFDN1-205ENST00000512925 VPS8Q8N3P4 1428 aa16.48■□□□□ 0.23
PFDN1-205ENST00000512925 KDM5AP29375 1690 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms