RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 ZNF644Q9H582 1327 aaPredicted RBP11.2□□□□□ -0.62
NPIPB3-203ENST00000504841 A2ML1A8K2U0 1454 aa11.19□□□□□ -0.62
NPIPB3-203ENST00000504841 DNMT1P26358 1616 aaKnown RBP11.18□□□□□ -0.62
NPIPB3-203ENST00000504841 HSPA1LP34931 641 aa11.18□□□□□ -0.62
NPIPB3-203ENST00000504841 TIAM1Q13009 1591 aa11.18□□□□□ -0.62
NPIPB3-203ENST00000504841 TNRQ92752 1358 aa11.17□□□□□ -0.62
NPIPB3-203ENST00000504841 MED1Q15648 1581 aaPredicted RBP11.17□□□□□ -0.62
NPIPB3-203ENST00000504841 POLR1AO95602 1720 aaPredicted RBP11.17□□□□□ -0.62
NPIPB3-203ENST00000504841 FBXO31Q5XUX0 539 aaPredicted RBP11.16□□□□□ -0.62
NPIPB3-203ENST00000504841 NEURL4Q96JN8 1562 aa11.16□□□□□ -0.62
NPIPB3-203ENST00000504841 EHBP1L1Q8N3D4 1523 aa11.15□□□□□ -0.62
NPIPB3-203ENST00000504841 KIF3BO15066 747 aa11.15□□□□□ -0.62
NPIPB3-203ENST00000504841 CPS1P31327 1500 aa11.14□□□□□ -0.63
NPIPB3-203ENST00000504841 KDM5DQ9BY66 1539 aa11.14□□□□□ -0.63
NPIPB3-203ENST00000504841 MBD5Q9P267 1494 aa11.14□□□□□ -0.63
NPIPB3-203ENST00000504841 SHANK2Q9UPX8 1470 aa11.14□□□□□ -0.63
NPIPB3-203ENST00000504841 TOM1O60784 492 aa11.14□□□□□ -0.63
NPIPB3-203ENST00000504841 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.14□□□□□ -0.63
NPIPB3-203ENST00000504841 DHX29Q7Z478 1369 aaKnown RBP11.13□□□□□ -0.63
NPIPB3-203ENST00000504841 PZPP20742 1482 aa11.12□□□□□ -0.63
NPIPB3-203ENST00000504841 RTEL1-TNFRSF6BF6WH68 1400 aa11.12□□□□□ -0.63
NPIPB3-203ENST00000504841 CAMSAP2Q08AD1 1489 aa11.12□□□□□ -0.63
NPIPB3-203ENST00000504841 CCDC141Q6ZP82 1450 aa11.12□□□□□ -0.63
NPIPB3-203ENST00000504841 WASHC2CQ9Y4E1 1318 aa11.11□□□□□ -0.63
NPIPB3-203ENST00000504841 ANKLE2Q86XL3 938 aa11.11□□□□□ -0.63
NPIPB3-203ENST00000504841 VWDEQ8N2E2 1590 aa11.11□□□□□ -0.63
NPIPB3-203ENST00000504841 NPHP4O75161 1426 aaPredicted RBP11.1□□□□□ -0.63
NPIPB3-203ENST00000504841 CEP162Q5TB80 1403 aa11.09□□□□□ -0.63
NPIPB3-203ENST00000504841 FAM135AQ9P2D6 1515 aa11.09□□□□□ -0.63
NPIPB3-203ENST00000504841 UGGT1Q9NYU2 1555 aa11.09□□□□□ -0.63
NPIPB3-203ENST00000504841 NLRP1Q9C000 1473 aa11.08□□□□□ -0.64
NPIPB3-203ENST00000504841 MAPK8IP2Q13387 824 aaPredicted RBP11.08□□□□□ -0.64
NPIPB3-203ENST00000504841 THEMISQ8N1K5 641 aaPredicted RBP11.08□□□□□ -0.64
NPIPB3-203ENST00000504841 MIA2Q96PC5 1412 aa11.08□□□□□ -0.64
NPIPB3-203ENST00000504841 IQGAP1P46940 1657 aa11.08□□□□□ -0.64
NPIPB3-203ENST00000504841 NCOA2Q15596 1464 aa11.07□□□□□ -0.64
NPIPB3-203ENST00000504841 DEPDC5O75140 1603 aa11.06□□□□□ -0.64
NPIPB3-203ENST00000504841 ALKQ9UM73 1620 aa11.06□□□□□ -0.64
NPIPB3-203ENST00000504841 MED14O60244 1454 aa11.06□□□□□ -0.64
NPIPB3-203ENST00000504841 STRCP1A6NGW2 1772 aa11.04□□□□□ -0.64
NPIPB3-203ENST00000504841 TSPY4P0CV99 314 aa11.04□□□□□ -0.64
NPIPB3-203ENST00000504841 TSPY10P0CW01 314 aa11.04□□□□□ -0.64
NPIPB3-203ENST00000504841 RNF17Q9BXT8 1623 aaKnown RBP11.04□□□□□ -0.64
NPIPB3-203ENST00000504841 ABCC3O15438 1527 aa11.04□□□□□ -0.64
NPIPB3-203ENST00000504841 LRRC7Q96NW7 1537 aa11.04□□□□□ -0.64
NPIPB3-203ENST00000504841 SYNMO15061 1565 aa11.03□□□□□ -0.64
NPIPB3-203ENST00000504841 RSPH4AQ5TD94 716 aa11.03□□□□□ -0.64
NPIPB3-203ENST00000504841 ERVK-7P63135 1459 aa11.03□□□□□ -0.64
NPIPB3-203ENST00000504841 ARHGEF5Q12774 1597 aa11.03□□□□□ -0.64
NPIPB3-203ENST00000504841 ZC3H13Q5T200 1668 aaKnown RBP11.01□□□□□ -0.65
NPIPB3-203ENST00000504841 CEP152O94986 1710 aa11.01□□□□□ -0.65
NPIPB3-203ENST00000504841 SCAF11Q99590 1463 aaKnown RBP11□□□□□ -0.65
NPIPB3-203ENST00000504841 MROH1Q8NDA8 1641 aa10.98□□□□□ -0.65
NPIPB3-203ENST00000504841 EIF2AK4Q9P2K8 1649 aaKnown RBP10.98□□□□□ -0.65
NPIPB3-203ENST00000504841 UBR1Q8IWV7 1749 aa10.98□□□□□ -0.65
NPIPB3-203ENST00000504841 CFAP65Q6ZU64 1925 aaKnown RBP10.98□□□□□ -0.65
NPIPB3-203ENST00000504841 MAST1Q9Y2H9 1570 aa10.98□□□□□ -0.65
NPIPB3-203ENST00000504841 TXNDC2Q86VQ3 553 aa10.97□□□□□ -0.65
NPIPB3-203ENST00000504841 LRRC9Q6ZRR7 1453 aa10.95□□□□□ -0.66
NPIPB3-203ENST00000504841 LTKP29376 864 aa10.95□□□□□ -0.66
NPIPB3-203ENST00000504841 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.94□□□□□ -0.66
NPIPB3-203ENST00000504841 RGS17Q9UGC6 210 aaPredicted RBP10.94□□□□□ -0.66
NPIPB3-203ENST00000504841 STAG3Q9UJ98 1225 aa10.94□□□□□ -0.66
NPIPB3-203ENST00000504841 SLIT1O75093 1534 aa10.94□□□□□ -0.66
NPIPB3-203ENST00000504841 DUOX2Q9NRD8 1548 aa10.94□□□□□ -0.66
NPIPB3-203ENST00000504841 XIRP1Q702N8 1843 aaKnown RBP10.93□□□□□ -0.66
NPIPB3-203ENST00000504841 CNKSR2Q8WXI2 1034 aa10.93□□□□□ -0.66
NPIPB3-203ENST00000504841 EID1Q9Y6B2 187 aa10.93□□□□□ -0.66
NPIPB3-203ENST00000504841 ARHGAP23Q9P227 1491 aa10.93□□□□□ -0.66
NPIPB3-203ENST00000504841 MYOM3Q5VTT5 1437 aa10.92□□□□□ -0.66
NPIPB3-203ENST00000504841 VPS8Q8N3P4 1428 aa10.92□□□□□ -0.66
NPIPB3-203ENST00000504841 KIF15Q9NS87 1388 aa10.92□□□□□ -0.66
NPIPB3-203ENST00000504841 PIK3C2BO00750 1634 aa10.92□□□□□ -0.66
NPIPB3-203ENST00000504841 NCBP3Q53F19 620 aaKnown RBP10.92□□□□□ -0.66
NPIPB3-203ENST00000504841 RBM33Q96EV2 1170 aaKnown RBP10.92□□□□□ -0.66
NPIPB3-203ENST00000504841 PRDM15P57071 1507 aaPredicted RBP10.92□□□□□ -0.66
NPIPB3-203ENST00000504841 TMEM94Q12767 1356 aa10.91□□□□□ -0.66
NPIPB3-203ENST00000504841 KANK4Q5T7N3 995 aaPredicted RBP10.91□□□□□ -0.66
NPIPB3-203ENST00000504841 RRP7BPQ9NSQ0 103 aa10.91□□□□□ -0.66
NPIPB3-203ENST00000504841 ERBINQ96RT1 1412 aa10.9□□□□□ -0.66
NPIPB3-203ENST00000504841 TMEM2Q9UHN6 1383 aa10.9□□□□□ -0.67
NPIPB3-203ENST00000504841 EFCAB6Q5THR3 1501 aa10.89□□□□□ -0.67
NPIPB3-203ENST00000504841 POTEAQ6S8J7 498 aa10.89□□□□□ -0.67
NPIPB3-203ENST00000504841 SLC26A8Q96RN1 970 aa10.89□□□□□ -0.67
NPIPB3-203ENST00000504841 ARHGAP31Q2M1Z3 1444 aa10.89□□□□□ -0.67
NPIPB3-203ENST00000504841 KANK1Q14678 1352 aa10.89□□□□□ -0.67
NPIPB3-203ENST00000504841 CROCC2H7BZ55 1655 aa10.89□□□□□ -0.67
NPIPB3-203ENST00000504841 ROBO1Q9Y6N7 1651 aa10.89□□□□□ -0.67
NPIPB3-203ENST00000504841 FAM135BQ49AJ0 1406 aa10.88□□□□□ -0.67
NPIPB3-203ENST00000504841 PROSER2Q86WR7 435 aaPredicted RBP10.88□□□□□ -0.67
NPIPB3-203ENST00000504841 BCANQ96GW7 911 aa10.88□□□□□ -0.67
NPIPB3-203ENST00000504841 MAP3K1Q13233 1512 aa10.88□□□□□ -0.67
NPIPB3-203ENST00000504841 ABCC5O15440 1437 aa10.87□□□□□ -0.67
NPIPB3-203ENST00000504841 SETD1AO15047 1707 aaKnown RBP10.87□□□□□ -0.67
NPIPB3-203ENST00000504841 KCNA6P17658 529 aa10.86□□□□□ -0.67
NPIPB3-203ENST00000504841 PTPN23Q9H3S7 1636 aa10.86□□□□□ -0.67
NPIPB3-203ENST00000504841 DAPK1P53355 1430 aa10.85□□□□□ -0.67
NPIPB3-203ENST00000504841 IDI1Q13907 227 aa10.85□□□□□ -0.67
NPIPB3-203ENST00000504841 CHIC2Q9UKJ5 165 aa10.85□□□□□ -0.67
NPIPB3-203ENST00000504841 ADGRB3O60242 1522 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms