RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 TNRQ92752 1358 aa17.53■□□□□ 0.4
LCN2-206ENST00000488391 ANKLE2Q86XL3 938 aa17.52■□□□□ 0.4
LCN2-206ENST00000488391 MBD5Q9P267 1494 aa17.51■□□□□ 0.39
LCN2-206ENST00000488391 SHANK2Q9UPX8 1470 aa17.51■□□□□ 0.39
LCN2-206ENST00000488391 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.5■□□□□ 0.39
LCN2-206ENST00000488391 WASHC2CQ9Y4E1 1318 aa17.49■□□□□ 0.39
LCN2-206ENST00000488391 MED1Q15648 1581 aaPredicted RBP17.49■□□□□ 0.39
LCN2-206ENST00000488391 RTEL1-TNFRSF6BF6WH68 1400 aa17.49■□□□□ 0.39
LCN2-206ENST00000488391 THEMISQ8N1K5 641 aaPredicted RBP17.49■□□□□ 0.39
LCN2-206ENST00000488391 SENP3Q9H4L4 574 aaPredicted RBP17.49■□□□□ 0.39
LCN2-206ENST00000488391 CPS1P31327 1500 aa17.48■□□□□ 0.39
LCN2-206ENST00000488391 NEURL4Q96JN8 1562 aa17.48■□□□□ 0.39
LCN2-206ENST00000488391 PHF23Q9BUL5 403 aaPredicted RBP17.47■□□□□ 0.39
LCN2-206ENST00000488391 POLR1AO95602 1720 aaPredicted RBP17.47■□□□□ 0.39
LCN2-206ENST00000488391 TIAM1Q13009 1591 aa17.46■□□□□ 0.39
LCN2-206ENST00000488391 MIA2Q96PC5 1412 aa17.45■□□□□ 0.38
LCN2-206ENST00000488391 PZPP20742 1482 aa17.44■□□□□ 0.38
LCN2-206ENST00000488391 NPHP4O75161 1426 aaPredicted RBP17.43■□□□□ 0.38
LCN2-206ENST00000488391 VWDEQ8N2E2 1590 aa17.42■□□□□ 0.38
LCN2-206ENST00000488391 KDM5DQ9BY66 1539 aa17.42■□□□□ 0.38
LCN2-206ENST00000488391 RSPH4AQ5TD94 716 aa17.41■□□□□ 0.38
LCN2-206ENST00000488391 CEP162Q5TB80 1403 aa17.4■□□□□ 0.38
LCN2-206ENST00000488391 UGGT1Q9NYU2 1555 aa17.4■□□□□ 0.38
LCN2-206ENST00000488391 CCDC141Q6ZP82 1450 aa17.39■□□□□ 0.37
LCN2-206ENST00000488391 EHBP1L1Q8N3D4 1523 aa17.39■□□□□ 0.37
LCN2-206ENST00000488391 FAM135AQ9P2D6 1515 aa17.39■□□□□ 0.37
LCN2-206ENST00000488391 TSPY4P0CV99 314 aa17.39■□□□□ 0.37
LCN2-206ENST00000488391 TSPY10P0CW01 314 aa17.39■□□□□ 0.37
LCN2-206ENST00000488391 NLRP1Q9C000 1473 aa17.38■□□□□ 0.37
LCN2-206ENST00000488391 ALKQ9UM73 1620 aa17.38■□□□□ 0.37
LCN2-206ENST00000488391 MED14O60244 1454 aa17.37■□□□□ 0.37
LCN2-206ENST00000488391 CAMSAP2Q08AD1 1489 aa17.37■□□□□ 0.37
LCN2-206ENST00000488391 DEPDC5O75140 1603 aa17.36■□□□□ 0.37
LCN2-206ENST00000488391 NCOA2Q15596 1464 aa17.34■□□□□ 0.37
LCN2-206ENST00000488391 LRRC7Q96NW7 1537 aa17.34■□□□□ 0.37
LCN2-206ENST00000488391 CFAP65Q6ZU64 1925 aaKnown RBP17.33■□□□□ 0.37
LCN2-206ENST00000488391 STRCP1A6NGW2 1772 aa17.33■□□□□ 0.37
LCN2-206ENST00000488391 IQGAP1P46940 1657 aa17.33■□□□□ 0.37
LCN2-206ENST00000488391 RGS17Q9UGC6 210 aaPredicted RBP17.29■□□□□ 0.36
LCN2-206ENST00000488391 LTKP29376 864 aa17.28■□□□□ 0.36
LCN2-206ENST00000488391 TXNDC2Q86VQ3 553 aa17.28■□□□□ 0.36
LCN2-206ENST00000488391 ABCC3O15438 1527 aa17.27■□□□□ 0.36
LCN2-206ENST00000488391 ARHGEF5Q12774 1597 aa17.27■□□□□ 0.35
LCN2-206ENST00000488391 ERVK-7P63135 1459 aa17.26■□□□□ 0.35
LCN2-206ENST00000488391 LOC105371045A0A1W2PR82 267 aa17.26■□□□□ 0.35
LCN2-206ENST00000488391 RNF17Q9BXT8 1623 aaKnown RBP17.25■□□□□ 0.35
LCN2-206ENST00000488391 SCAF11Q99590 1463 aaKnown RBP17.23■□□□□ 0.35
LCN2-206ENST00000488391 SYNMO15061 1565 aa17.23■□□□□ 0.35
LCN2-206ENST00000488391 EID1Q9Y6B2 187 aa17.22■□□□□ 0.35
LCN2-206ENST00000488391 ZC3H13Q5T200 1668 aaKnown RBP17.22■□□□□ 0.35
LCN2-206ENST00000488391 UBR1Q8IWV7 1749 aa17.21■□□□□ 0.35
LCN2-206ENST00000488391 CEP152O94986 1710 aa17.21■□□□□ 0.35
LCN2-206ENST00000488391 MROH1Q8NDA8 1641 aa17.19■□□□□ 0.34
LCN2-206ENST00000488391 POTEAQ6S8J7 498 aa17.19■□□□□ 0.34
LCN2-206ENST00000488391 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.19■□□□□ 0.34
LCN2-206ENST00000488391 MAST1Q9Y2H9 1570 aa17.19■□□□□ 0.34
LCN2-206ENST00000488391 KANK4Q5T7N3 995 aaPredicted RBP17.18■□□□□ 0.34
LCN2-206ENST00000488391 RBM33Q96EV2 1170 aaKnown RBP17.18■□□□□ 0.34
LCN2-206ENST00000488391 STAG3Q9UJ98 1225 aa17.18■□□□□ 0.34
LCN2-206ENST00000488391 XIRP1Q702N8 1843 aaKnown RBP17.18■□□□□ 0.34
LCN2-206ENST00000488391 ARHGAP23Q9P227 1491 aa17.18■□□□□ 0.34
LCN2-206ENST00000488391 RRP7BPQ9NSQ0 103 aa17.17■□□□□ 0.34
LCN2-206ENST00000488391 EIF2AK4Q9P2K8 1649 aaKnown RBP17.17■□□□□ 0.34
LCN2-206ENST00000488391 FAM135BQ49AJ0 1406 aa17.16■□□□□ 0.34
LCN2-206ENST00000488391 LRRC9Q6ZRR7 1453 aa17.16■□□□□ 0.34
LCN2-206ENST00000488391 SLIT1O75093 1534 aa17.16■□□□□ 0.34
LCN2-206ENST00000488391 PROSER2Q86WR7 435 aaPredicted RBP17.15■□□□□ 0.34
LCN2-206ENST00000488391 TMEM94Q12767 1356 aa17.15■□□□□ 0.34
LCN2-206ENST00000488391 SLC26A8Q96RN1 970 aa17.14■□□□□ 0.33
LCN2-206ENST00000488391 TMEM2Q9UHN6 1383 aa17.14■□□□□ 0.33
LCN2-206ENST00000488391 DUOX2Q9NRD8 1548 aa17.13■□□□□ 0.33
LCN2-206ENST00000488391 KCNA6P17658 529 aa17.13■□□□□ 0.33
LCN2-206ENST00000488391 ARHGAP31Q2M1Z3 1444 aa17.13■□□□□ 0.33
LCN2-206ENST00000488391 IDI1Q13907 227 aa17.12■□□□□ 0.33
LCN2-206ENST00000488391 KIF15Q9NS87 1388 aa17.12■□□□□ 0.33
LCN2-206ENST00000488391 MYOM3Q5VTT5 1437 aa17.12■□□□□ 0.33
LCN2-206ENST00000488391 PIK3C2BO00750 1634 aa17.1■□□□□ 0.33
LCN2-206ENST00000488391 BCANQ96GW7 911 aa17.09■□□□□ 0.33
LCN2-206ENST00000488391 VPS8Q8N3P4 1428 aa17.08■□□□□ 0.32
LCN2-206ENST00000488391 KANK1Q14678 1352 aa17.07■□□□□ 0.32
LCN2-206ENST00000488391 ROBO1Q9Y6N7 1651 aa17.07■□□□□ 0.32
LCN2-206ENST00000488391 PRDM15P57071 1507 aaPredicted RBP17.06■□□□□ 0.32
LCN2-206ENST00000488391 ABCC5O15440 1437 aa17.06■□□□□ 0.32
LCN2-206ENST00000488391 CHIC2Q9UKJ5 165 aa17.06■□□□□ 0.32
LCN2-206ENST00000488391 SLAIN2Q9P270 581 aa17.05■□□□□ 0.32
LCN2-206ENST00000488391 EFCAB6Q5THR3 1501 aa17.05■□□□□ 0.32
LCN2-206ENST00000488391 ERBINQ96RT1 1412 aa17.04■□□□□ 0.32
LCN2-206ENST00000488391 TET3O43151 1660 aa17.04■□□□□ 0.32
LCN2-206ENST00000488391 MAP3K1Q13233 1512 aa17.03■□□□□ 0.32
LCN2-206ENST00000488391 MSH6P52701 1360 aa17.02■□□□□ 0.31
LCN2-206ENST00000488391 DAPK1P53355 1430 aa16.99■□□□□ 0.31
LCN2-206ENST00000488391 JCADQ9P266 1359 aa16.99■□□□□ 0.31
LCN2-206ENST00000488391 KDM5AP29375 1690 aaKnown RBP16.98■□□□□ 0.31
LCN2-206ENST00000488391 SLC52A1Q9NWF4 448 aa16.98■□□□□ 0.31
LCN2-206ENST00000488391 PTPN23Q9H3S7 1636 aa16.98■□□□□ 0.31
LCN2-206ENST00000488391 SETD1AO15047 1707 aaKnown RBP16.98■□□□□ 0.31
LCN2-206ENST00000488391 PHLPP1O60346 1717 aa16.98■□□□□ 0.31
LCN2-206ENST00000488391 CROCC2H7BZ55 1655 aa16.97■□□□□ 0.31
LCN2-206ENST00000488391 ANKRD30AQ9BXX3 1397 aa16.97■□□□□ 0.31
LCN2-206ENST00000488391 NKTRP30414 1462 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms