RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 MBD5Q9P267 1494 aa16.03■□□□□ 0.16
COL4A5-204ENST00000477429 DNMT1P26358 1616 aaKnown RBP16.01■□□□□ 0.15
COL4A5-204ENST00000477429 CCNB3Q8WWL7 1395 aa16.01■□□□□ 0.15
COL4A5-204ENST00000477429 NEURL4Q96JN8 1562 aa16.01■□□□□ 0.15
COL4A5-204ENST00000477429 PPP6R1Q9UPN7 881 aa16.01■□□□□ 0.15
COL4A5-204ENST00000477429 TIAM1Q13009 1591 aa16■□□□□ 0.15
COL4A5-204ENST00000477429 A2ML1A8K2U0 1454 aa15.99■□□□□ 0.15
COL4A5-204ENST00000477429 PLEKHH2Q8IVE3 1493 aa15.98■□□□□ 0.15
COL4A5-204ENST00000477429 ADGBQ8N7X0 1667 aa15.95■□□□□ 0.14
COL4A5-204ENST00000477429 DHX29Q7Z478 1369 aaKnown RBP15.95■□□□□ 0.14
COL4A5-204ENST00000477429 MTUS2Q5JR59 1369 aa15.94■□□□□ 0.14
COL4A5-204ENST00000477429 TNRQ92752 1358 aa15.94■□□□□ 0.14
COL4A5-204ENST00000477429 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.94■□□□□ 0.14
COL4A5-204ENST00000477429 VWDEQ8N2E2 1590 aa15.93■□□□□ 0.14
COL4A5-204ENST00000477429 SHANK2Q9UPX8 1470 aa15.93■□□□□ 0.14
COL4A5-204ENST00000477429 CPS1P31327 1500 aa15.93■□□□□ 0.14
COL4A5-204ENST00000477429 KIF3BO15066 747 aa15.92■□□□□ 0.14
COL4A5-204ENST00000477429 RTEL1-TNFRSF6BF6WH68 1400 aa15.91■□□□□ 0.14
COL4A5-204ENST00000477429 POLR1AO95602 1720 aaPredicted RBP15.91■□□□□ 0.14
COL4A5-204ENST00000477429 PZPP20742 1482 aa15.91■□□□□ 0.14
COL4A5-204ENST00000477429 IFFO2Q5TF58 517 aa15.9■□□□□ 0.14
COL4A5-204ENST00000477429 KDM5DQ9BY66 1539 aa15.88■□□□□ 0.13
COL4A5-204ENST00000477429 STRCP1A6NGW2 1772 aa15.87■□□□□ 0.13
COL4A5-204ENST00000477429 CEP162Q5TB80 1403 aa15.87■□□□□ 0.13
COL4A5-204ENST00000477429 MIA2Q96PC5 1412 aa15.87■□□□□ 0.13
COL4A5-204ENST00000477429 EHBP1L1Q8N3D4 1523 aa15.87■□□□□ 0.13
COL4A5-204ENST00000477429 CAMSAP2Q08AD1 1489 aa15.86■□□□□ 0.13
COL4A5-204ENST00000477429 NPHP4O75161 1426 aaPredicted RBP15.85■□□□□ 0.13
COL4A5-204ENST00000477429 CCDC141Q6ZP82 1450 aa15.85■□□□□ 0.13
COL4A5-204ENST00000477429 ANKLE2Q86XL3 938 aa15.85■□□□□ 0.13
COL4A5-204ENST00000477429 WASHC2CQ9Y4E1 1318 aa15.85■□□□□ 0.13
COL4A5-204ENST00000477429 MED14O60244 1454 aa15.84■□□□□ 0.13
COL4A5-204ENST00000477429 NCOA2Q15596 1464 aa15.84■□□□□ 0.13
COL4A5-204ENST00000477429 UGGT1Q9NYU2 1555 aa15.83■□□□□ 0.13
COL4A5-204ENST00000477429 LRRC7Q96NW7 1537 aa15.82■□□□□ 0.12
COL4A5-204ENST00000477429 DEPDC5O75140 1603 aa15.81■□□□□ 0.12
COL4A5-204ENST00000477429 THEMISQ8N1K5 641 aaPredicted RBP15.81■□□□□ 0.12
COL4A5-204ENST00000477429 SETBP1Q9Y6X0 1596 aa15.81■□□□□ 0.12
COL4A5-204ENST00000477429 NLRP1Q9C000 1473 aa15.8■□□□□ 0.12
COL4A5-204ENST00000477429 TRIM52Q96A61 297 aa15.79■□□□□ 0.12
COL4A5-204ENST00000477429 IQGAP1P46940 1657 aa15.79■□□□□ 0.12
COL4A5-204ENST00000477429 MROH1Q8NDA8 1641 aa15.79■□□□□ 0.12
COL4A5-204ENST00000477429 ABCC3O15438 1527 aa15.78■□□□□ 0.12
COL4A5-204ENST00000477429 FAM135AQ9P2D6 1515 aa15.78■□□□□ 0.12
COL4A5-204ENST00000477429 ARHGEF5Q12774 1597 aa15.76■□□□□ 0.11
COL4A5-204ENST00000477429 ERVK-7P63135 1459 aa15.76■□□□□ 0.11
COL4A5-204ENST00000477429 ZC3H13Q5T200 1668 aaKnown RBP15.76■□□□□ 0.11
COL4A5-204ENST00000477429 RNF17Q9BXT8 1623 aaKnown RBP15.76■□□□□ 0.11
COL4A5-204ENST00000477429 LTKP29376 864 aa15.75■□□□□ 0.11
COL4A5-204ENST00000477429 UBR1Q8IWV7 1749 aa15.71■□□□□ 0.11
COL4A5-204ENST00000477429 XIRP1Q702N8 1843 aaKnown RBP15.71■□□□□ 0.11
COL4A5-204ENST00000477429 KANK4Q5T7N3 995 aaPredicted RBP15.71■□□□□ 0.11
COL4A5-204ENST00000477429 RSPH4AQ5TD94 716 aa15.71■□□□□ 0.11
COL4A5-204ENST00000477429 CEP152O94986 1710 aa15.71■□□□□ 0.1
COL4A5-204ENST00000477429 TSPY4P0CV99 314 aa15.7■□□□□ 0.1
COL4A5-204ENST00000477429 TSPY10P0CW01 314 aa15.7■□□□□ 0.1
COL4A5-204ENST00000477429 MAST1Q9Y2H9 1570 aa15.7■□□□□ 0.1
COL4A5-204ENST00000477429 ARHGAP23Q9P227 1491 aa15.69■□□□□ 0.1
COL4A5-204ENST00000477429 SYNMO15061 1565 aa15.69■□□□□ 0.1
COL4A5-204ENST00000477429 CFAP65Q6ZU64 1925 aaKnown RBP15.68■□□□□ 0.1
COL4A5-204ENST00000477429 SCAF11Q99590 1463 aaKnown RBP15.68■□□□□ 0.1
COL4A5-204ENST00000477429 RBM33Q96EV2 1170 aaKnown RBP15.68■□□□□ 0.1
COL4A5-204ENST00000477429 LRRC9Q6ZRR7 1453 aa15.67■□□□□ 0.1
COL4A5-204ENST00000477429 TXNDC2Q86VQ3 553 aa15.66■□□□□ 0.1
COL4A5-204ENST00000477429 SLIT1O75093 1534 aa15.66■□□□□ 0.1
COL4A5-204ENST00000477429 EIF2AK4Q9P2K8 1649 aaKnown RBP15.65■□□□□ 0.1
COL4A5-204ENST00000477429 PIK3C2BO00750 1634 aa15.62■□□□□ 0.09
COL4A5-204ENST00000477429 LOC105371045A0A1W2PR82 267 aa15.61■□□□□ 0.09
COL4A5-204ENST00000477429 ZRANB1Q9UGI0 708 aa15.61■□□□□ 0.09
COL4A5-204ENST00000477429 TMEM94Q12767 1356 aa15.61■□□□□ 0.09
COL4A5-204ENST00000477429 ARHGAP31Q2M1Z3 1444 aa15.6■□□□□ 0.09
COL4A5-204ENST00000477429 PRDM15P57071 1507 aaPredicted RBP15.6■□□□□ 0.09
COL4A5-204ENST00000477429 MAP3K1Q13233 1512 aa15.6■□□□□ 0.09
COL4A5-204ENST00000477429 DUOX2Q9NRD8 1548 aa15.6■□□□□ 0.09
COL4A5-204ENST00000477429 RRP7BPQ9NSQ0 103 aa15.6■□□□□ 0.09
COL4A5-204ENST00000477429 TMEM2Q9UHN6 1383 aa15.6■□□□□ 0.09
COL4A5-204ENST00000477429 ABCC5O15440 1437 aa15.6■□□□□ 0.09
COL4A5-204ENST00000477429 MYOM3Q5VTT5 1437 aa15.6■□□□□ 0.09
COL4A5-204ENST00000477429 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.59■□□□□ 0.09
COL4A5-204ENST00000477429 KIF15Q9NS87 1388 aa15.59■□□□□ 0.09
COL4A5-204ENST00000477429 FAM135BQ49AJ0 1406 aa15.59■□□□□ 0.09
COL4A5-204ENST00000477429 VPS8Q8N3P4 1428 aa15.59■□□□□ 0.09
COL4A5-204ENST00000477429 IDI1Q13907 227 aa15.58■□□□□ 0.08
COL4A5-204ENST00000477429 SLC26A8Q96RN1 970 aa15.58■□□□□ 0.08
COL4A5-204ENST00000477429 LRP6O75581 1613 aa15.57■□□□□ 0.08
COL4A5-204ENST00000477429 TET3O43151 1660 aa15.57■□□□□ 0.08
COL4A5-204ENST00000477429 ROBO1Q9Y6N7 1651 aa15.55■□□□□ 0.08
COL4A5-204ENST00000477429 CDK12Q9NYV4 1490 aaPredicted RBP15.55■□□□□ 0.08
COL4A5-204ENST00000477429 KCNA6P17658 529 aa15.54■□□□□ 0.08
COL4A5-204ENST00000477429 RXRBP28702 533 aa15.54■□□□□ 0.08
COL4A5-204ENST00000477429 EID1Q9Y6B2 187 aa15.54■□□□□ 0.08
COL4A5-204ENST00000477429 ERBINQ96RT1 1412 aa15.53■□□□□ 0.08
COL4A5-204ENST00000477429 CROCC2H7BZ55 1655 aa15.53■□□□□ 0.08
COL4A5-204ENST00000477429 EFCAB6Q5THR3 1501 aa15.53■□□□□ 0.08
COL4A5-204ENST00000477429 ZNF772Q68DY9 489 aaPredicted RBP15.52■□□□□ 0.08
COL4A5-204ENST00000477429 PROSER2Q86WR7 435 aaPredicted RBP15.52■□□□□ 0.08
COL4A5-204ENST00000477429 CHIC2Q9UKJ5 165 aa15.51■□□□□ 0.07
COL4A5-204ENST00000477429 DAPK1P53355 1430 aa15.51■□□□□ 0.07
COL4A5-204ENST00000477429 LMTK2Q8IWU2 1503 aa15.5■□□□□ 0.07
COL4A5-204ENST00000477429 RGS12O14924 1447 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms