RNA–Protein interactions for RNA: ENST00000474911.5

RTN1-205, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-205ENST00000474911 ABCC5O15440 1437 aa20.37■□□□□ 0.85
RTN1-205ENST00000474911 EIF2AK4Q9P2K8 1649 aaKnown RBP20.35■□□□□ 0.85
RTN1-205ENST00000474911 DAPK1P53355 1430 aa20.35■□□□□ 0.85
RTN1-205ENST00000474911 KIF3BO15066 747 aa20.35■□□□□ 0.85
RTN1-205ENST00000474911 NPATQ14207 1427 aa20.34■□□□□ 0.85
RTN1-205ENST00000474911 UHRF1BP1Q6BDS2 1440 aa20.33■□□□□ 0.85
RTN1-205ENST00000474911 DUOX2Q9NRD8 1548 aa20.32■□□□□ 0.84
RTN1-205ENST00000474911 RNF17Q9BXT8 1623 aaKnown RBP20.32■□□□□ 0.84
RTN1-205ENST00000474911 FAM50AQ14320 339 aaKnown RBP20.32■□□□□ 0.84
RTN1-205ENST00000474911 KDM5DQ9BY66 1539 aa20.31■□□□□ 0.84
RTN1-205ENST00000474911 HSPA2P54652 639 aa20.3■□□□□ 0.84
RTN1-205ENST00000474911 PTPRKQ15262 1439 aa20.28■□□□□ 0.84
RTN1-205ENST00000474911 KIF15Q9NS87 1388 aa20.27■□□□□ 0.84
RTN1-205ENST00000474911 ZC3H13Q5T200 1668 aaKnown RBP20.27■□□□□ 0.84
RTN1-205ENST00000474911 ERBINQ96RT1 1412 aa20.26■□□□□ 0.83
RTN1-205ENST00000474911 MROH1Q8NDA8 1641 aa20.25■□□□□ 0.83
RTN1-205ENST00000474911 WASHC2CQ9Y4E1 1318 aa20.24■□□□□ 0.83
RTN1-205ENST00000474911 FOXD1Q16676 465 aa20.24■□□□□ 0.83
RTN1-205ENST00000474911 ANKRD30AQ9BXX3 1397 aa20.24■□□□□ 0.83
RTN1-205ENST00000474911 ZNF142P52746 1687 aaPredicted RBP20.23■□□□□ 0.83
RTN1-205ENST00000474911 ADGRL2O95490 1459 aa20.23■□□□□ 0.83
RTN1-205ENST00000474911 PZPP20742 1482 aa20.23■□□□□ 0.83
RTN1-205ENST00000474911 MYO3AQ8NEV4 1616 aa20.23■□□□□ 0.83
RTN1-205ENST00000474911 NCOA1Q15788 1441 aa20.22■□□□□ 0.83
RTN1-205ENST00000474911 RRP7BPQ9NSQ0 103 aa20.22■□□□□ 0.83
RTN1-205ENST00000474911 STRCQ7RTU9 1775 aa20.22■□□□□ 0.83
RTN1-205ENST00000474911 ABCC3O15438 1527 aa20.21■□□□□ 0.83
RTN1-205ENST00000474911 PRDM15P57071 1507 aaPredicted RBP20.21■□□□□ 0.83
RTN1-205ENST00000474911 DEPDC5O75140 1603 aa20.2■□□□□ 0.82
RTN1-205ENST00000474911 ITGAEP38570 1179 aa20.19■□□□□ 0.82
RTN1-205ENST00000474911 CHIC2Q9UKJ5 165 aa20.19■□□□□ 0.82
RTN1-205ENST00000474911 CEP152O94986 1710 aa20.18■□□□□ 0.82
RTN1-205ENST00000474911 CEP170BQ9Y4F5 1589 aaPredicted RBP20.18■□□□□ 0.82
RTN1-205ENST00000474911 CAMSAP1Q5T5Y3 1602 aa20.16■□□□□ 0.82
RTN1-205ENST00000474911 DMRT2Q9Y5R5 561 aa20.14■□□□□ 0.81
RTN1-205ENST00000474911 TNRQ92752 1358 aa20.14■□□□□ 0.81
RTN1-205ENST00000474911 A2ML1A8K2U0 1454 aa20.13■□□□□ 0.81
RTN1-205ENST00000474911 FBXO31Q5XUX0 539 aaPredicted RBP20.13■□□□□ 0.81
RTN1-205ENST00000474911 SPATA31D1Q6ZQQ2 1576 aa20.12■□□□□ 0.81
RTN1-205ENST00000474911 PLA2R1Q13018 1463 aa20.12■□□□□ 0.81
RTN1-205ENST00000474911 ROCK1Q13464 1354 aa20.11■□□□□ 0.81
RTN1-205ENST00000474911 ARHGAP31Q2M1Z3 1444 aa20.11■□□□□ 0.81
RTN1-205ENST00000474911 VWDEQ8N2E2 1590 aa20.11■□□□□ 0.81
RTN1-205ENST00000474911 PTPRTO14522 1441 aa20.1■□□□□ 0.81
RTN1-205ENST00000474911 NLRP1Q9C000 1473 aa20.1■□□□□ 0.81
RTN1-205ENST00000474911 KANK1Q14678 1352 aa20.09■□□□□ 0.81
RTN1-205ENST00000474911 ANKRD50Q9ULJ7 1429 aa20.09■□□□□ 0.81
RTN1-205ENST00000474911 LMTK2Q8IWU2 1503 aa20.09■□□□□ 0.81
RTN1-205ENST00000474911 CFAP65Q6ZU64 1925 aaKnown RBP20.08■□□□□ 0.81
RTN1-205ENST00000474911 ERVK-7P63135 1459 aa20.08■□□□□ 0.8
RTN1-205ENST00000474911 GCC2Q8IWJ2 1684 aa20.06■□□□□ 0.8
RTN1-205ENST00000474911 HFM1A2PYH4 1435 aa20.05■□□□□ 0.8
RTN1-205ENST00000474911 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.05■□□□□ 0.8
RTN1-205ENST00000474911 SETD5Q9C0A6 1442 aa20.05■□□□□ 0.8
RTN1-205ENST00000474911 UGGT1Q9NYU2 1555 aa20.03■□□□□ 0.8
RTN1-205ENST00000474911 PKD2Q13563 968 aa20.03■□□□□ 0.8
RTN1-205ENST00000474911 UNC13BO14795 1591 aa20.02■□□□□ 0.8
RTN1-205ENST00000474911 POLR1AO95602 1720 aaPredicted RBP20.02■□□□□ 0.8
RTN1-205ENST00000474911 EFCAB6Q5THR3 1501 aa20.01■□□□□ 0.79
RTN1-205ENST00000474911 NAIPQ13075 1403 aa20.01■□□□□ 0.79
RTN1-205ENST00000474911 NCKAP5LQ9HCH0 1330 aa19.99■□□□□ 0.79
RTN1-205ENST00000474911 THEMISQ8N1K5 641 aaPredicted RBP19.99■□□□□ 0.79
RTN1-205ENST00000474911 RAB3GAP2Q9H2M9 1393 aa19.99■□□□□ 0.79
RTN1-205ENST00000474911 TET3O43151 1660 aa19.98■□□□□ 0.79
RTN1-205ENST00000474911 UBR1Q8IWV7 1749 aa19.97■□□□□ 0.79
RTN1-205ENST00000474911 ILDR1Q86SU0 546 aaPredicted RBP19.97■□□□□ 0.79
RTN1-205ENST00000474911 RPRD2Q5VT52 1461 aaKnown RBP19.97■□□□□ 0.79
RTN1-205ENST00000474911 HRCP23327 699 aa19.96■□□□□ 0.79
RTN1-205ENST00000474911 NEURL4Q96JN8 1562 aa19.95■□□□□ 0.78
RTN1-205ENST00000474911 IQGAP3Q86VI3 1631 aa19.94■□□□□ 0.78
RTN1-205ENST00000474911 KDM5AP29375 1690 aaKnown RBP19.94■□□□□ 0.78
RTN1-205ENST00000474911 CERKQ8TCT0 537 aa19.93■□□□□ 0.78
RTN1-205ENST00000474911 FBXO41Q8TF61 875 aa19.93■□□□□ 0.78
RTN1-205ENST00000474911 NOS1P29475 1434 aa19.93■□□□□ 0.78
RTN1-205ENST00000474911 SYNMO15061 1565 aa19.93■□□□□ 0.78
RTN1-205ENST00000474911 ANKLE2Q86XL3 938 aa19.93■□□□□ 0.78
RTN1-205ENST00000474911 LTBP4Q8N2S1 1624 aa19.92■□□□□ 0.78
RTN1-205ENST00000474911 PIK3C2BO00750 1634 aa19.92■□□□□ 0.78
RTN1-205ENST00000474911 MED14O60244 1454 aa19.92■□□□□ 0.78
RTN1-205ENST00000474911 ACIN1Q9UKV3 1341 aaKnown RBP19.89■□□□□ 0.77
RTN1-205ENST00000474911 E9PCH4 1651 aa19.89■□□□□ 0.77
RTN1-205ENST00000474911 SLIT1O75093 1534 aa19.88■□□□□ 0.77
RTN1-205ENST00000474911 ARHGAP23Q9P227 1491 aa19.88■□□□□ 0.77
RTN1-205ENST00000474911 IQGAP1P46940 1657 aa19.87■□□□□ 0.77
RTN1-205ENST00000474911 SLC52A1Q9NWF4 448 aa19.86■□□□□ 0.77
RTN1-205ENST00000474911 NUP155O75694 1391 aa19.86■□□□□ 0.77
RTN1-205ENST00000474911 IDI1Q13907 227 aa19.85■□□□□ 0.77
RTN1-205ENST00000474911 CCER1Q8TC90 406 aaPredicted RBP19.85■□□□□ 0.77
RTN1-205ENST00000474911 NPHP4O75161 1426 aaPredicted RBP19.85■□□□□ 0.77
RTN1-205ENST00000474911 IQSEC2Q5JU85 1478 aa19.85■□□□□ 0.77
RTN1-205ENST00000474911 SCAF11Q99590 1463 aaKnown RBP19.84■□□□□ 0.77
RTN1-205ENST00000474911 ZNF335Q9H4Z2 1342 aaPredicted RBP19.84■□□□□ 0.77
RTN1-205ENST00000474911 ADGRB3O60242 1522 aa19.83■□□□□ 0.77
RTN1-205ENST00000474911 DHX57Q6P158 1386 aaKnown RBP19.83■□□□□ 0.76
RTN1-205ENST00000474911 STAG3Q9UJ98 1225 aa19.82■□□□□ 0.76
RTN1-205ENST00000474911 TMEM2Q9UHN6 1383 aa19.81■□□□□ 0.76
RTN1-205ENST00000474911 MYO5BQ9ULV0 1848 aa19.78■□□□□ 0.76
RTN1-205ENST00000474911 LTKP29376 864 aa19.78■□□□□ 0.76
RTN1-205ENST00000474911 TXNDC2Q86VQ3 553 aa19.78■□□□□ 0.76
RTN1-205ENST00000474911 EID1Q9Y6B2 187 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms