RNA–Protein interactions for RNA: ENST00000423041.6

PAPD4-202, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAPD4, Length 3,223 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-202ENST00000423041 ESPNB1AK53 854 aa12.11□□□□□ -0.47
PAPD4-202ENST00000423041 ZFP91Q96JP5 570 aaPredicted RBP12.11□□□□□ -0.47
PAPD4-202ENST00000423041 FOXD1Q16676 465 aa12.1□□□□□ -0.47
PAPD4-202ENST00000423041 GOLGA6L3A6NEY3 463 aa12.1□□□□□ -0.47
PAPD4-202ENST00000423041 TRHP20396 242 aaPredicted RBP12.1□□□□□ -0.47
PAPD4-202ENST00000423041 LRRC9Q6ZRR7 1453 aa12.1□□□□□ -0.47
PAPD4-202ENST00000423041 TIAM1Q13009 1591 aa12.09□□□□□ -0.47
PAPD4-202ENST00000423041 CCDC18Q5T9S5 1454 aa12.09□□□□□ -0.47
PAPD4-202ENST00000423041 KIAA1211Q6ZU35 1233 aa12.09□□□□□ -0.47
PAPD4-202ENST00000423041 ZNF830Q96NB3 372 aaPredicted RBP12.09□□□□□ -0.47
PAPD4-202ENST00000423041 VGLL3A8MV65 326 aa12.08□□□□□ -0.48
PAPD4-202ENST00000423041 TNNT2P45379 298 aaPredicted RBP12.08□□□□□ -0.48
PAPD4-202ENST00000423041 CHMP4AQ9BY43 222 aa12.08□□□□□ -0.48
PAPD4-202ENST00000423041 PRDM10Q9NQV6 1147 aa12.08□□□□□ -0.48
PAPD4-202ENST00000423041 TMEM51Q9NW97 253 aa12.08□□□□□ -0.48
PAPD4-202ENST00000423041 ABCC2Q92887 1545 aa12.08□□□□□ -0.48
PAPD4-202ENST00000423041 ABCA8O94911 1581 aa12.08□□□□□ -0.48
PAPD4-202ENST00000423041 RNF123Q5XPI4 1314 aa12.07□□□□□ -0.48
PAPD4-202ENST00000423041 PANK2Q9BZ23 570 aa12.07□□□□□ -0.48
PAPD4-202ENST00000423041 FAM13BQ9NYF5 915 aa12.07□□□□□ -0.48
PAPD4-202ENST00000423041 CFDP1Q9UEE9 299 aaPredicted RBP12.07□□□□□ -0.48
PAPD4-202ENST00000423041 UTP14CQ5TAP6 766 aaKnown RBP12.07□□□□□ -0.48
PAPD4-202ENST00000423041 ANP32BQ92688 251 aaKnown RBP12.07□□□□□ -0.48
PAPD4-202ENST00000423041 PPP4R3BQ5MIZ7 849 aa12.07□□□□□ -0.48
PAPD4-202ENST00000423041 CCNB3Q8WWL7 1395 aa12.06□□□□□ -0.48
PAPD4-202ENST00000423041 CCDC184Q52MB2 194 aa12.06□□□□□ -0.48
PAPD4-202ENST00000423041 SMG6Q86US8 1419 aaKnown RBP12.06□□□□□ -0.48
PAPD4-202ENST00000423041 NUDCQ9Y266 331 aa12.05□□□□□ -0.48
PAPD4-202ENST00000423041 FAM69CQ0P6D2 419 aa12.05□□□□□ -0.48
PAPD4-202ENST00000423041 MRS2Q9HD23 443 aa12.05□□□□□ -0.48
PAPD4-202ENST00000423041 PHLDB1Q86UU1 1377 aa12.05□□□□□ -0.48
PAPD4-202ENST00000423041 DMTNQ08495 405 aa12.05□□□□□ -0.48
PAPD4-202ENST00000423041 ARID3AQ99856 593 aa12.04□□□□□ -0.48
PAPD4-202ENST00000423041 CHIC2Q9UKJ5 165 aa12.04□□□□□ -0.48
PAPD4-202ENST00000423041 TROQ12816 1431 aaPredicted RBP12.04□□□□□ -0.48
PAPD4-202ENST00000423041 MAPKBP1O60336 1514 aa12.03□□□□□ -0.48
PAPD4-202ENST00000423041 TRIM44Q96DX7 344 aaPredicted RBP12.03□□□□□ -0.48
PAPD4-202ENST00000423041 TEX2Q8IWB9 1127 aa12.03□□□□□ -0.48
PAPD4-202ENST00000423041 ZNF644Q9H582 1327 aaPredicted RBP12.03□□□□□ -0.48
PAPD4-202ENST00000423041 MAGI3Q5TCQ9 1506 aa12.03□□□□□ -0.48
PAPD4-202ENST00000423041 ASXL2Q76L83 1435 aa12.03□□□□□ -0.48
PAPD4-202ENST00000423041 MYH16Q9H6N6 1097 aa12.03□□□□□ -0.48
PAPD4-202ENST00000423041 ADCY10Q96PN6 1610 aa12.03□□□□□ -0.48
PAPD4-202ENST00000423041 NCOA2Q15596 1464 aa12.03□□□□□ -0.48
PAPD4-202ENST00000423041 ERBB4Q15303 1308 aa12.02□□□□□ -0.48
PAPD4-202ENST00000423041 SECISBP2LQ93073 1101 aaKnown RBP12.01□□□□□ -0.49
PAPD4-202ENST00000423041 LRRIQ1Q96JM4 1722 aa12.01□□□□□ -0.49
PAPD4-202ENST00000423041 RIPK4P57078 832 aa12.01□□□□□ -0.49
PAPD4-202ENST00000423041 CDK11BP21127 795 aaKnown RBP12□□□□□ -0.49
PAPD4-202ENST00000423041 FSD2A1L4K1 749 aa12□□□□□ -0.49
PAPD4-202ENST00000423041 MTERF4Q7Z6M4 381 aaKnown RBP12□□□□□ -0.49
PAPD4-202ENST00000423041 KDM5BQ9UGL1 1544 aa12□□□□□ -0.49
PAPD4-202ENST00000423041 EHBP1L1Q8N3D4 1523 aa11.99□□□□□ -0.49
PAPD4-202ENST00000423041 EXOC6Q8TAG9 804 aa11.99□□□□□ -0.49
PAPD4-202ENST00000423041 UHRF1BP1LA0JNW5 1464 aa11.99□□□□□ -0.49
PAPD4-202ENST00000423041 ZCCHC11Q5TAX3 1644 aaKnown RBP11.98□□□□□ -0.49
PAPD4-202ENST00000423041 MRE11P49959 708 aa11.98□□□□□ -0.49
PAPD4-202ENST00000423041 HNRNPMP52272 730 aaKnown RBP eCLIP11.98□□□□□ -0.499e-7■■■■□ 24.4
PAPD4-202ENST00000423041 MAP3K1Q13233 1512 aa11.98□□□□□ -0.49
PAPD4-202ENST00000423041 AMER1Q5JTC6 1135 aaPredicted RBP11.98□□□□□ -0.49
PAPD4-202ENST00000423041 CFAP43Q8NDM7 1665 aa11.97□□□□□ -0.49
PAPD4-202ENST00000423041 RAB3GAP2Q9H2M9 1393 aa11.97□□□□□ -0.49
PAPD4-202ENST00000423041 KIF20AO95235 890 aa11.97□□□□□ -0.49
PAPD4-202ENST00000423041 GZF1Q9H116 711 aaPredicted RBP11.97□□□□□ -0.49
PAPD4-202ENST00000423041 WDR7Q9Y4E6 1490 aa11.97□□□□□ -0.49
PAPD4-202ENST00000423041 KIF14Q15058 1648 aa11.96□□□□□ -0.5
PAPD4-202ENST00000423041 ZSCAN20P17040 1043 aaPredicted RBP11.96□□□□□ -0.5
PAPD4-202ENST00000423041 TERF1P54274 439 aa11.96□□□□□ -0.5
PAPD4-202ENST00000423041 EFCAB2Q5VUJ9 269 aa11.96□□□□□ -0.5
PAPD4-202ENST00000423041 MYOM3Q5VTT5 1437 aa11.95□□□□□ -0.5
PAPD4-202ENST00000423041 SUPT6HQ7KZ85 1726 aaKnown RBP11.95□□□□□ -0.5
PAPD4-202ENST00000423041 CHRM1P11229 460 aaPredicted RBP11.95□□□□□ -0.5
PAPD4-202ENST00000423041 DNTTIP2Q5QJE6 756 aaKnown RBP11.95□□□□□ -0.5
PAPD4-202ENST00000423041 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.95□□□□□ -0.5
PAPD4-202ENST00000423041 RRP7BPQ9NSQ0 103 aa11.95□□□□□ -0.5
PAPD4-202ENST00000423041 OFD1O75665 1012 aa11.94□□□□□ -0.5
PAPD4-202ENST00000423041 FGD6Q6ZV73 1430 aa11.94□□□□□ -0.5
PAPD4-202ENST00000423041 SKAP1Q86WV1 359 aa11.93□□□□□ -0.5
PAPD4-202ENST00000423041 GTPBP4Q9BZE4 634 aaKnown RBP11.93□□□□□ -0.5
PAPD4-202ENST00000423041 PRKRIP1Q9H875 184 aaPredicted RBP11.93□□□□□ -0.5
PAPD4-202ENST00000423041 TSPY4P0CV99 314 aa11.92□□□□□ -0.5
PAPD4-202ENST00000423041 TSPY10P0CW01 314 aa11.92□□□□□ -0.5
PAPD4-202ENST00000423041 LETM1O95202 739 aaPredicted RBP11.92□□□□□ -0.5
PAPD4-202ENST00000423041 ARHGAP5Q13017 1502 aa11.92□□□□□ -0.5
PAPD4-202ENST00000423041 GRPEL1Q9HAV7 217 aa11.92□□□□□ -0.5
PAPD4-202ENST00000423041 CD109Q6YHK3 1445 aa11.91□□□□□ -0.5
PAPD4-202ENST00000423041 RRP1P56182 461 aaKnown RBP11.91□□□□□ -0.5
PAPD4-202ENST00000423041 IRX3P78415 501 aaPredicted RBP11.91□□□□□ -0.5
PAPD4-202ENST00000423041 SAMD1Q6SPF0 538 aaPredicted RBP11.91□□□□□ -0.5
PAPD4-202ENST00000423041 SLKQ9H2G2 1235 aaPredicted RBP11.91□□□□□ -0.5
PAPD4-202ENST00000423041 HAP1P54257 671 aaPredicted RBP11.91□□□□□ -0.5
PAPD4-202ENST00000423041 TAF3Q5VWG9 929 aa11.91□□□□□ -0.5
PAPD4-202ENST00000423041 R3HCC1Q9Y3T6 440 aaKnown RBP11.91□□□□□ -0.5
PAPD4-202ENST00000423041 RRBP1Q9P2E9 1410 aaKnown RBP11.91□□□□□ -0.5
PAPD4-202ENST00000423041 GPATCH8Q9UKJ3 1502 aaKnown RBP11.91□□□□□ -0.5
PAPD4-202ENST00000423041 AFAP1Q8N556 730 aa11.9□□□□□ -0.5
PAPD4-202ENST00000423041 CCDC94Q9BW85 323 aaPredicted RBP11.9□□□□□ -0.5
PAPD4-202ENST00000423041 FAM161AQ3B820 660 aa11.9□□□□□ -0.51
PAPD4-202ENST00000423041 PLPPR3Q6T4P5 718 aa11.9□□□□□ -0.51
PAPD4-202ENST00000423041 UQCRHLA0A096LP55 91 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms