RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 CLMNQ96JQ2 1002 aa11.21□□□□□ -0.62
VPS11-207ENST00000620429 RNF26Q9BY78 433 aaPredicted RBP11.21□□□□□ -0.62
VPS11-207ENST00000620429 RXFP1Q9HBX9 757 aa11.21□□□□□ -0.62
VPS11-207ENST00000620429 FAM114A2Q9NRY5 505 aa11.21□□□□□ -0.62
VPS11-207ENST00000620429 TUBA8Q9NY65 449 aaPredicted RBP11.21□□□□□ -0.62
VPS11-207ENST00000620429 LARSQ9P2J5 1176 aaKnown RBP11.21□□□□□ -0.62
VPS11-207ENST00000620429 SRP68Q9UHB9 627 aaKnown RBP11.21□□□□□ -0.62
VPS11-207ENST00000620429 RPL26L1Q9UNX3 145 aaKnown RBP11.21□□□□□ -0.62
VPS11-207ENST00000620429 CICQ96RK0 1608 aaPredicted RBP11.2□□□□□ -0.62
VPS11-207ENST00000620429 GTPBP6O43824 516 aaPredicted RBP11.2□□□□□ -0.62
VPS11-207ENST00000620429 HNRNPCP07910 306 aaKnown RBP eCLIP11.2□□□□□ -0.62
VPS11-207ENST00000620429 FUT4P22083 530 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 IGHMBP2P38935 993 aaKnown RBP11.2□□□□□ -0.62
VPS11-207ENST00000620429 HDAC4P56524 1084 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 OCRLQ01968 901 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 PPARDQ03181 441 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 GSTA3Q16772 222 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 TTC38Q5R3I4 469 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 AMIGO3Q86WK7 504 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 MIGA1Q8NAN2 632 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 CATSPER2Q96P56 530 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 NACAP1Q9BZK3 213 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 GPCPD1Q9NPB8 672 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 GDAQ9Y2T3 454 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 MYH10P35580 1976 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 MYH2Q9UKX2 1941 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.2□□□□□ -0.62
VPS11-207ENST00000620429 A0A0J9YVX5 310 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 TMEM247A6NEH6 219 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 GJB6O95452 261 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 CXCR5P32302 372 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 MLH1P40692 756 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 EIF3BP55884 814 aaKnown RBP11.2□□□□□ -0.62
VPS11-207ENST00000620429 GSTM4Q03013 218 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 KPNB1Q14974 876 aaKnown RBP11.2□□□□□ -0.62
VPS11-207ENST00000620429 P3H1Q32P28 736 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 WASHC2DQ5SRD0 308 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 ZNF658Q5TYW1 1059 aaPredicted RBP11.2□□□□□ -0.62
VPS11-207ENST00000620429 KLC3Q6P597 504 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 MB21D1Q8N884 522 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 DHTKD1Q96HY7 919 aaPredicted RBP11.2□□□□□ -0.62
VPS11-207ENST00000620429 PHF20Q9BVI0 1012 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 TLR10Q9BXR5 811 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 ZNF148Q9UQR1 794 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 TBC1D30Q9Y2I9 924 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 SLC4A4Q9Y6R1 1079 aa11.2□□□□□ -0.62
VPS11-207ENST00000620429 TRIM49BA6NDI0 452 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 SMIM22K7EJ46 135 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 IPO5O00410 1097 aaKnown RBP11.19□□□□□ -0.62
VPS11-207ENST00000620429 BIRC5O15392 142 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 RAD21O60216 631 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 SUPT3HO75486 399 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 SUN1O94901 812 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 LMNAP02545 664 aaKnown RBP11.19□□□□□ -0.62
VPS11-207ENST00000620429 SHBGP04278 402 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 TROVE2P10155 538 aaKnown RBP eCLIP11.19□□□□□ -0.62
VPS11-207ENST00000620429 VARSP26640 1264 aaKnown RBP11.19□□□□□ -0.62
VPS11-207ENST00000620429 VHLP40337 213 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 PRCPP42785 496 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 GYG1P46976 350 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 GPSM2P81274 684 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 RCN2Q14257 317 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 KRT71Q3SY84 523 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 SPDYCQ5MJ68 293 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 SAMD3Q8N6K7 520 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 NUDCD1Q96RS6 583 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 PPP1R12CQ9BZL4 782 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 NMRK1Q9NWW6 199 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 LRWD1Q9UFC0 647 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 INTUQ9ULD6 942 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 CHMP2BQ9UQN3 213 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 ATF5Q9Y2D1 282 aaPredicted RBP11.19□□□□□ -0.62
VPS11-207ENST00000620429 V9GY48 417 aaPredicted RBP11.19□□□□□ -0.62
VPS11-207ENST00000620429 H7C1D1 291 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 UNC5CO95185 931 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 RPN1P04843 607 aaKnown RBP11.19□□□□□ -0.62
VPS11-207ENST00000620429 HPCAP84074 193 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 MAP7Q14244 749 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 TRADDQ15628 312 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 DUS1LQ6P1R4 473 aaKnown RBP11.19□□□□□ -0.62
VPS11-207ENST00000620429 PDXDC2PQ6P474 469 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 SLC51AQ86UW1 340 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 IQCF2Q8IXL9 164 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 LCORLQ8N3X6 602 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 POLR3CQ9BUI4 534 aaPredicted RBP11.19□□□□□ -0.62
VPS11-207ENST00000620429 INIPQ9NRY2 104 aa11.19□□□□□ -0.62
VPS11-207ENST00000620429 LGALS16A8MUM7 142 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 ECE2O60344 883 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 ATP9AO75110 1047 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 MOCS3O95396 460 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 CYP1A1P04798 512 aaPredicted RBP11.18□□□□□ -0.62
VPS11-207ENST00000620429 SPATA31D3P0C874 917 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 SPA17Q15506 151 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 LIN52Q52LA3 116 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 SLC44A4Q53GD3 710 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 SPATA31D4Q6ZUB0 917 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 ADGRA1Q86SQ6 560 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 IRF2BP1Q8IU81 584 aa11.18□□□□□ -0.62
VPS11-207ENST00000620429 AGGF1Q8N302 714 aaeCLIP11.18□□□□□ -0.62
VPS11-207ENST00000620429 NR1H4Q96RI1 486 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms