RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 RTN4RL1Q86UN2 441 aaPredicted RBP16.66■□□□□ 0.26
UBXN1-218ENST00000616865 ALYREFQ86V81 257 aaKnown RBP16.66■□□□□ 0.26
UBXN1-218ENST00000616865 POTEDQ86YR6 584 aa16.66■□□□□ 0.26
UBXN1-218ENST00000616865 CYP2W1Q8TAV3 490 aa16.66■□□□□ 0.26
UBXN1-218ENST00000616865 TNPO1Q92973 898 aaKnown RBP16.66■□□□□ 0.26
UBXN1-218ENST00000616865 PPP2R3CQ969Q6 453 aa16.66■□□□□ 0.26
UBXN1-218ENST00000616865 ZNF577Q9BSK1 485 aa16.66■□□□□ 0.26
UBXN1-218ENST00000616865 KCNH6Q9H252 994 aa16.66■□□□□ 0.26
UBXN1-218ENST00000616865 IGFLR1Q9H665 355 aa16.66■□□□□ 0.26
UBXN1-218ENST00000616865 KCNH7Q9NS40 1196 aa16.66■□□□□ 0.26
UBXN1-218ENST00000616865 CD207Q9UJ71 328 aa16.66■□□□□ 0.26
UBXN1-218ENST00000616865 PADI3Q9ULW8 664 aa16.66■□□□□ 0.26
UBXN1-218ENST00000616865 MYH15Q9Y2K3 1946 aa16.66■□□□□ 0.26
UBXN1-218ENST00000616865 IGLV3-22A0A075B6J6 115 aa16.65■□□□□ 0.26
UBXN1-218ENST00000616865 SLC37A4O43826 429 aa16.65■□□□□ 0.26
UBXN1-218ENST00000616865 ITGB1P05556 798 aa16.65■□□□□ 0.26
UBXN1-218ENST00000616865 ARP10275 920 aa16.65■□□□□ 0.26
UBXN1-218ENST00000616865 DNAJB1P25685 340 aa16.65■□□□□ 0.26
UBXN1-218ENST00000616865 NDUFV1P49821 464 aa16.65■□□□□ 0.26
UBXN1-218ENST00000616865 DNM1Q05193 864 aaKnown RBP16.65■□□□□ 0.26
UBXN1-218ENST00000616865 PAK2Q13177 524 aa16.65■□□□□ 0.26
UBXN1-218ENST00000616865 ADAM15Q13444 863 aa16.65■□□□□ 0.26
UBXN1-218ENST00000616865 PLCB4Q15147 1175 aa16.65■□□□□ 0.26
UBXN1-218ENST00000616865 SF3A1Q15459 793 aaKnown RBP16.65■□□□□ 0.26
UBXN1-218ENST00000616865 SLFN12Q8IYM2 578 aa16.65■□□□□ 0.26
UBXN1-218ENST00000616865 TRAPPC12Q8WVT3 735 aa16.65■□□□□ 0.26
UBXN1-218ENST00000616865 MSLNLQ96KJ4 702 aa16.65■□□□□ 0.26
UBXN1-218ENST00000616865 MBOAT7Q96N66 472 aa16.65■□□□□ 0.26
UBXN1-218ENST00000616865 SDF4Q9BRK5 362 aa16.65■□□□□ 0.26
UBXN1-218ENST00000616865 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.65■□□□□ 0.26
UBXN1-218ENST00000616865 MUTYHQ9UIF7 546 aa16.65■□□□□ 0.26
UBXN1-218ENST00000616865 PCDHA2Q9Y5H9 948 aa16.65■□□□□ 0.26
UBXN1-218ENST00000616865 NFASCO94856 1347 aa16.65■□□□□ 0.26
UBXN1-218ENST00000616865 KDM3AQ9Y4C1 1321 aa16.65■□□□□ 0.26
UBXN1-218ENST00000616865 FNDC1Q4ZHG4 1894 aaPredicted RBP16.65■□□□□ 0.26
UBXN1-218ENST00000616865 IPO5O00410 1097 aaKnown RBP16.64■□□□□ 0.25
UBXN1-218ENST00000616865 LAD1O00515 517 aa16.64■□□□□ 0.25
UBXN1-218ENST00000616865 WNT7AO00755 349 aa16.64■□□□□ 0.25
UBXN1-218ENST00000616865 OR52Z1P0C646 297 aa16.64■□□□□ 0.25
UBXN1-218ENST00000616865 STAG3L1P0CL83 205 aa16.64■□□□□ 0.25
UBXN1-218ENST00000616865 ACTR2P61160 394 aa16.64■□□□□ 0.25
UBXN1-218ENST00000616865 PTGDRQ13258 359 aa16.64■□□□□ 0.25
UBXN1-218ENST00000616865 TMEM266Q2M3C6 531 aa16.64■□□□□ 0.25
UBXN1-218ENST00000616865 PAN2Q504Q3 1202 aaKnown RBP16.64■□□□□ 0.25
UBXN1-218ENST00000616865 HERC4Q5GLZ8 1057 aaPredicted RBP16.64■□□□□ 0.25
UBXN1-218ENST00000616865 HFE2Q6ZVN8 426 aa16.64■□□□□ 0.25
UBXN1-218ENST00000616865 PLPPR4Q7Z2D5 763 aa16.64■□□□□ 0.25
UBXN1-218ENST00000616865 ADGRD2Q7Z7M1 963 aa16.64■□□□□ 0.25
UBXN1-218ENST00000616865 SPPL3Q8TCT6 385 aa16.64■□□□□ 0.25
UBXN1-218ENST00000616865 FAM20AQ96MK3 541 aa16.64■□□□□ 0.25
UBXN1-218ENST00000616865 USP28Q96RU2 1077 aa16.64■□□□□ 0.25
UBXN1-218ENST00000616865 CELF4Q9BZC1 486 aaKnown RBP16.64■□□□□ 0.25
UBXN1-218ENST00000616865 AGO4Q9HCK5 861 aaKnown RBP16.64■□□□□ 0.25
UBXN1-218ENST00000616865 CLIC4Q9Y696 253 aa16.64■□□□□ 0.25
UBXN1-218ENST00000616865 SMIM35A0A1B0GVV1 85 aa16.63■□□□□ 0.25
UBXN1-218ENST00000616865 TBX3O15119 743 aa16.63■□□□□ 0.25
UBXN1-218ENST00000616865 MSH4O15457 936 aa16.63■□□□□ 0.25
UBXN1-218ENST00000616865 EDIL3O43854 480 aa16.63■□□□□ 0.25
UBXN1-218ENST00000616865 GAS7O60861 476 aa16.63■□□□□ 0.25
UBXN1-218ENST00000616865 STAT5BP51692 787 aa16.63■□□□□ 0.25
UBXN1-218ENST00000616865 NHLH1Q02575 133 aa16.63■□□□□ 0.25
UBXN1-218ENST00000616865 ITGB3BPQ13352 177 aaPredicted RBP16.63■□□□□ 0.25
UBXN1-218ENST00000616865 LRCH2Q5VUJ6 765 aa16.63■□□□□ 0.25
UBXN1-218ENST00000616865 RNF135Q8IUD6 432 aa16.63■□□□□ 0.25
UBXN1-218ENST00000616865 KLHL23Q8NBE8 558 aa16.63■□□□□ 0.25
UBXN1-218ENST00000616865 POF1BQ8WVV4 589 aa16.63■□□□□ 0.25
UBXN1-218ENST00000616865 FBXL18Q96ME1 805 aa16.63■□□□□ 0.25
UBXN1-218ENST00000616865 TEKT3Q9BXF9 490 aa16.63■□□□□ 0.25
UBXN1-218ENST00000616865 TMX1Q9H3N1 280 aa16.63■□□□□ 0.25
UBXN1-218ENST00000616865 TBC1D22BQ9NU19 505 aa16.63■□□□□ 0.25
UBXN1-218ENST00000616865 ZNF318Q5VUA4 2279 aa16.63■□□□□ 0.25
UBXN1-218ENST00000616865 DDX39AO00148 427 aaKnown RBP16.62■□□□□ 0.25
UBXN1-218ENST00000616865 EYA4O95677 639 aa16.62■□□□□ 0.25
UBXN1-218ENST00000616865 TXKP42681 527 aa16.62■□□□□ 0.25
UBXN1-218ENST00000616865 GATMP50440 423 aa16.62■□□□□ 0.25
UBXN1-218ENST00000616865 KRT76Q01546 638 aa16.62■□□□□ 0.25
UBXN1-218ENST00000616865 MTHFD1LQ6UB35 978 aa16.62■□□□□ 0.25
UBXN1-218ENST00000616865 EFHBQ8N7U6 833 aa16.62■□□□□ 0.25
UBXN1-218ENST00000616865 SMRP1Q8NCR6 262 aa16.62■□□□□ 0.25
UBXN1-218ENST00000616865 LENG9Q96B70 501 aa16.62■□□□□ 0.25
UBXN1-218ENST00000616865 SPATA32Q96LK8 384 aa16.62■□□□□ 0.25
UBXN1-218ENST00000616865 TMEM60Q9H2L4 133 aa16.62■□□□□ 0.25
UBXN1-218ENST00000616865 CLEC1BQ9P126 229 aa16.62■□□□□ 0.25
UBXN1-218ENST00000616865 LRFN2Q9ULH4 789 aa16.62■□□□□ 0.25
UBXN1-218ENST00000616865 TRIOO75962 3097 aa16.62■□□□□ 0.25
UBXN1-218ENST00000616865 ATG7O95352 703 aa16.61■□□□□ 0.25
UBXN1-218ENST00000616865 YEATS4O95619 227 aa16.61■□□□□ 0.25
UBXN1-218ENST00000616865 NRIP1P48552 1158 aa16.61■□□□□ 0.25
UBXN1-218ENST00000616865 NASPP49321 788 aaPredicted RBP16.61■□□□□ 0.25
UBXN1-218ENST00000616865 SARSP49591 514 aaKnown RBP16.61■□□□□ 0.25
UBXN1-218ENST00000616865 SLC26A2P50443 739 aa16.61■□□□□ 0.25
UBXN1-218ENST00000616865 ATP2C1P98194 919 aaPredicted RBP16.61■□□□□ 0.25
UBXN1-218ENST00000616865 COASYQ13057 564 aa16.61■□□□□ 0.25
UBXN1-218ENST00000616865 DTHD1Q6ZMT9 781 aa16.61■□□□□ 0.25
UBXN1-218ENST00000616865 NME8Q8N427 588 aa16.61■□□□□ 0.25
UBXN1-218ENST00000616865 ETNPPLQ8TBG4 499 aa16.61■□□□□ 0.25
UBXN1-218ENST00000616865 SLC5A5Q92911 643 aa16.61■□□□□ 0.25
UBXN1-218ENST00000616865 RIT2Q99578 217 aa16.61■□□□□ 0.25
UBXN1-218ENST00000616865 RAB34Q9BZG1 259 aa16.61■□□□□ 0.25
UBXN1-218ENST00000616865 SCAND2PQ9GZW5 306 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms