RNA–Protein interactions for RNA: ENST00000602959.5

UBE2E3-213, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2E3, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-213ENST00000602959 YME1L1Q96TA2 773 aa27.04■■□□□ 1.92
UBE2E3-213ENST00000602959 POLR3CQ9BUI4 534 aaPredicted RBP27.04■■□□□ 1.92
UBE2E3-213ENST00000602959 EYSQ5T1H1 3165 aa27.04■■□□□ 1.92
UBE2E3-213ENST00000602959 EMC2Q15006 297 aa27.03■■□□□ 1.92
UBE2E3-213ENST00000602959 SPRED2Q7Z698 418 aa27.03■■□□□ 1.92
UBE2E3-213ENST00000602959 NLRC5Q86WI3 1866 aa27.03■■□□□ 1.92
UBE2E3-213ENST00000602959 CATSPER3Q86XQ3 398 aa27.03■■□□□ 1.92
UBE2E3-213ENST00000602959 ERMNQ8TAM6 284 aa27.03■■□□□ 1.92
UBE2E3-213ENST00000602959 NLRP7Q8WX94 980 aa27.03■■□□□ 1.92
UBE2E3-213ENST00000602959 SNX21Q969T3 373 aa27.03■■□□□ 1.92
UBE2E3-213ENST00000602959 SCLT1Q96NL6 688 aa27.03■■□□□ 1.92
UBE2E3-213ENST00000602959 RC3H2Q9HBD1 1191 aaKnown RBP27.03■■□□□ 1.92
UBE2E3-213ENST00000602959 RALGAPA2Q2PPJ7 1873 aa27.02■■□□□ 1.92
UBE2E3-213ENST00000602959 MGEA5O60502 916 aa27.02■■□□□ 1.92
UBE2E3-213ENST00000602959 XRCC6P12956 609 aaKnown RBP eCLIP27.02■■□□□ 1.92
UBE2E3-213ENST00000602959 PDCP20941 246 aa27.02■■□□□ 1.92
UBE2E3-213ENST00000602959 PRPHP41219 470 aa27.02■■□□□ 1.92
UBE2E3-213ENST00000602959 NPAS4Q8IUM7 802 aa27.02■■□□□ 1.92
UBE2E3-213ENST00000602959 ZNF668Q96K58 619 aaPredicted RBP27.02■■□□□ 1.92
UBE2E3-213ENST00000602959 CERS4Q9HA82 394 aa27.02■■□□□ 1.92
UBE2E3-213ENST00000602959 RGS18Q9NS28 235 aa27.02■■□□□ 1.92
UBE2E3-213ENST00000602959 EPOPA6NHQ4 379 aa27.01■■□□□ 1.91
UBE2E3-213ENST00000602959 MED24O75448 989 aa27.01■■□□□ 1.91
UBE2E3-213ENST00000602959 RPA1P27694 616 aa27.01■■□□□ 1.91
UBE2E3-213ENST00000602959 ERVK-21P61565 698 aa27.01■■□□□ 1.91
UBE2E3-213ENST00000602959 ADGRE1Q14246 886 aa27.01■■□□□ 1.91
UBE2E3-213ENST00000602959 RHPN2Q8IUC4 686 aa27.01■■□□□ 1.91
UBE2E3-213ENST00000602959 IGSF22Q8N9C0 903 aa27.01■■□□□ 1.91
UBE2E3-213ENST00000602959 TGS1Q96RS0 853 aaKnown RBP27.01■■□□□ 1.91
UBE2E3-213ENST00000602959 GCOM2Q9BZD3 368 aaPredicted RBP27.01■■□□□ 1.91
UBE2E3-213ENST00000602959 C1orf112Q9NSG2 853 aa27.01■■□□□ 1.91
UBE2E3-213ENST00000602959 DENND3A2RUS2 1198 aa27■■□□□ 1.91
UBE2E3-213ENST00000602959 SARSP49591 514 aaKnown RBP27■■□□□ 1.91
UBE2E3-213ENST00000602959 RARRES1P49788 294 aa27■■□□□ 1.91
UBE2E3-213ENST00000602959 PDIA5Q14554 519 aa27■■□□□ 1.91
UBE2E3-213ENST00000602959 DSC3Q14574 896 aa27■■□□□ 1.91
UBE2E3-213ENST00000602959 HAUS3Q68CZ6 603 aa27■■□□□ 1.91
UBE2E3-213ENST00000602959 BRAPQ7Z569 592 aa27■■□□□ 1.91
UBE2E3-213ENST00000602959 MAFAQ8NHW3 353 aaPredicted RBP27■■□□□ 1.91
UBE2E3-213ENST00000602959 PIGOQ8TEQ8 1089 aa27■■□□□ 1.91
UBE2E3-213ENST00000602959 TCP11Q8WWU5 503 aa27■■□□□ 1.91
UBE2E3-213ENST00000602959 PSPC1Q8WXF1 523 aaKnown RBP27■■□□□ 1.91
UBE2E3-213ENST00000602959 ARNTL2Q8WYA1 636 aa27■■□□□ 1.91
UBE2E3-213ENST00000602959 ADAM2Q99965 735 aa27■■□□□ 1.91
UBE2E3-213ENST00000602959 RAB34Q9BZG1 259 aa27■■□□□ 1.91
UBE2E3-213ENST00000602959 XPNPEP1Q9NQW7 623 aa27■■□□□ 1.91
UBE2E3-213ENST00000602959 COL4A3BPQ9Y5P4 624 aa27■■□□□ 1.91
UBE2E3-213ENST00000602959 A0A087WZ62 844 aa26.99■■□□□ 1.91
UBE2E3-213ENST00000602959 DGAT1O75907 488 aa26.99■■□□□ 1.91
UBE2E3-213ENST00000602959 STAG3L1P0CL83 205 aa26.99■■□□□ 1.91
UBE2E3-213ENST00000602959 MUTP22033 750 aa26.99■■□□□ 1.91
UBE2E3-213ENST00000602959 ATP2C1P98194 919 aaPredicted RBP26.99■■□□□ 1.91
UBE2E3-213ENST00000602959 SLC24A5Q71RS6 500 aa26.99■■□□□ 1.91
UBE2E3-213ENST00000602959 TMEM143Q96AN5 459 aa26.99■■□□□ 1.91
UBE2E3-213ENST00000602959 ZNF689Q96CS4 500 aaPredicted RBP26.99■■□□□ 1.91
UBE2E3-213ENST00000602959 CCDC43Q96MW1 224 aaKnown RBP26.99■■□□□ 1.91
UBE2E3-213ENST00000602959 MTRQ99707 1265 aa26.99■■□□□ 1.91
UBE2E3-213ENST00000602959 FDXACB1Q9BRP7 624 aaPredicted RBP26.99■■□□□ 1.91
UBE2E3-213ENST00000602959 BMP2KQ9NSY1 1161 aaPredicted RBP26.99■■□□□ 1.91
UBE2E3-213ENST00000602959 LRWD1Q9UFC0 647 aa26.99■■□□□ 1.91
UBE2E3-213ENST00000602959 DBR1Q9UK59 544 aaKnown RBP26.99■■□□□ 1.91
UBE2E3-213ENST00000602959 ADGRA3Q8IWK6 1321 aa26.98■■□□□ 1.91
UBE2E3-213ENST00000602959 C9IYK1 514 aa26.98■■□□□ 1.91
UBE2E3-213ENST00000602959 DGKIO75912 1065 aa26.98■■□□□ 1.91
UBE2E3-213ENST00000602959 POTEGQ6S5H5 508 aa26.98■■□□□ 1.91
UBE2E3-213ENST00000602959 KSR1Q8IVT5 923 aa26.98■■□□□ 1.91
UBE2E3-213ENST00000602959 PRPF31Q8WWY3 499 aaKnown RBP26.98■■□□□ 1.91
UBE2E3-213ENST00000602959 NLRP4Q96MN2 994 aa26.98■■□□□ 1.91
UBE2E3-213ENST00000602959 NACC1Q96RE7 527 aa26.98■■□□□ 1.91
UBE2E3-213ENST00000602959 INO80BQ9C086 356 aaPredicted RBP26.98■■□□□ 1.91
UBE2E3-213ENST00000602959 ATP6V0A4Q9HBG4 840 aa26.98■■□□□ 1.91
UBE2E3-213ENST00000602959 STK24Q9Y6E0 443 aa26.98■■□□□ 1.91
UBE2E3-213ENST00000602959 VPS37CA5D8V6 355 aaPredicted RBP26.97■■□□□ 1.91
UBE2E3-213ENST00000602959 IL17AQ16552 155 aa26.97■■□□□ 1.91
UBE2E3-213ENST00000602959 FERMT3Q86UX7 667 aa26.97■■□□□ 1.91
UBE2E3-213ENST00000602959 SAMD11Q96NU1 681 aa26.97■■□□□ 1.91
UBE2E3-213ENST00000602959 IFT122Q9HBG6 1241 aa26.97■■□□□ 1.91
UBE2E3-213ENST00000602959 RNF216Q9NWF9 866 aaPredicted RBP26.97■■□□□ 1.91
UBE2E3-213ENST00000602959 PRRC2BQ5JSZ5 2229 aaKnown RBP26.97■■□□□ 1.91
UBE2E3-213ENST00000602959 FNDC1Q4ZHG4 1894 aaPredicted RBP26.96■■□□□ 1.91
UBE2E3-213ENST00000602959 RFXAPO00287 272 aa26.96■■□□□ 1.91
UBE2E3-213ENST00000602959 ASAP2O43150 1006 aa26.96■■□□□ 1.91
UBE2E3-213ENST00000602959 POU3F3P20264 500 aaPredicted RBP26.96■■□□□ 1.91
UBE2E3-213ENST00000602959 SFPQP23246 707 aaKnown RBP eCLIP26.96■■□□□ 1.914e-7■■■■□ 26
UBE2E3-213ENST00000602959 FAM189BP81408 668 aa26.96■■□□□ 1.91
UBE2E3-213ENST00000602959 LAMTOR4Q0VGL1 99 aa26.96■■□□□ 1.91
UBE2E3-213ENST00000602959 DTHD1Q6ZMT9 781 aa26.96■■□□□ 1.91
UBE2E3-213ENST00000602959 C17orf80Q9BSJ5 609 aa26.96■■□□□ 1.91
UBE2E3-213ENST00000602959 MTUS1Q9ULD2 1270 aa26.96■■□□□ 1.91
UBE2E3-213ENST00000602959 KIAA1671Q9BY89 1806 aa26.95■■□□□ 1.91
UBE2E3-213ENST00000602959 A0A087WWV3 80 aa26.95■■□□□ 1.9
UBE2E3-213ENST00000602959 LPXNO60711 386 aa26.95■■□□□ 1.9
UBE2E3-213ENST00000602959 CSDE1O75534 798 aaKnown RBP26.95■■□□□ 1.9
UBE2E3-213ENST00000602959 ZSCAN20P17040 1043 aaPredicted RBP26.95■■□□□ 1.9
UBE2E3-213ENST00000602959 SYT1P21579 422 aa26.95■■□□□ 1.9
UBE2E3-213ENST00000602959 FGFR4P22455 802 aa26.95■■□□□ 1.9
UBE2E3-213ENST00000602959 CCT6AP40227 531 aaKnown RBP26.95■■□□□ 1.9
UBE2E3-213ENST00000602959 FIBCD1Q8N539 461 aa26.95■■□□□ 1.9
UBE2E3-213ENST00000602959 LRFN2Q9ULH4 789 aa26.95■■□□□ 1.9
UBE2E3-213ENST00000602959 PRUNE2Q8WUY3 3088 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms