RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 FGBP02675 491 aa22.6■■□□□ 1.21
PNKP-211ENST00000598020 ARL2P36404 184 aa22.6■■□□□ 1.21
PNKP-211ENST00000598020 ME1P48163 572 aa22.6■■□□□ 1.21
PNKP-211ENST00000598020 NLRP11P59045 1033 aaKnown RBP22.6■■□□□ 1.21
PNKP-211ENST00000598020 LPIN1Q14693 890 aa22.6■■□□□ 1.21
PNKP-211ENST00000598020 CNKSR3Q6P9H4 555 aa22.6■■□□□ 1.21
PNKP-211ENST00000598020 ZNF410Q86VK4 478 aa22.6■■□□□ 1.21
PNKP-211ENST00000598020 SYT2Q8N9I0 419 aaPredicted RBP22.6■■□□□ 1.21
PNKP-211ENST00000598020 PSPC1Q8WXF1 523 aaKnown RBP22.6■■□□□ 1.21
PNKP-211ENST00000598020 HERVK_113Q902F9 699 aa22.6■■□□□ 1.21
PNKP-211ENST00000598020 TMEM143Q96AN5 459 aa22.6■■□□□ 1.21
PNKP-211ENST00000598020 CHAMP1Q96JM3 812 aa22.6■■□□□ 1.21
PNKP-211ENST00000598020 IPO9Q96P70 1041 aaKnown RBP22.6■■□□□ 1.21
PNKP-211ENST00000598020 OSBPL7Q9BZF2 842 aa22.6■■□□□ 1.21
PNKP-211ENST00000598020 CDHR5Q9HBB8 845 aa22.6■■□□□ 1.21
PNKP-211ENST00000598020 CHMP5Q9NZZ3 219 aa22.6■■□□□ 1.21
PNKP-211ENST00000598020 COLQQ9Y215 455 aaPredicted RBP22.6■■□□□ 1.21
PNKP-211ENST00000598020 USO1O60763 962 aaKnown RBP22.59■■□□□ 1.21
PNKP-211ENST00000598020 PLCG1P19174 1290 aa22.59■■□□□ 1.21
PNKP-211ENST00000598020 NCLP19338 710 aaKnown RBP22.59■■□□□ 1.21
PNKP-211ENST00000598020 MXD4Q14582 209 aaPredicted RBP22.59■■□□□ 1.21
PNKP-211ENST00000598020 KIZQ2M2Z5 673 aa22.59■■□□□ 1.21
PNKP-211ENST00000598020 RASIP1Q5U651 963 aa22.59■■□□□ 1.21
PNKP-211ENST00000598020 SHC4Q6S5L8 630 aa22.59■■□□□ 1.21
PNKP-211ENST00000598020 TSHZ1Q6ZSZ6 1077 aa22.59■■□□□ 1.21
PNKP-211ENST00000598020 TDHQ8IZJ6 230 aa22.59■■□□□ 1.21
PNKP-211ENST00000598020 PRPF31Q8WWY3 499 aaKnown RBP22.59■■□□□ 1.21
PNKP-211ENST00000598020 PLIN2Q99541 437 aa22.59■■□□□ 1.21
PNKP-211ENST00000598020 BLOC1S4Q9NUP1 217 aa22.59■■□□□ 1.21
PNKP-211ENST00000598020 KCND2Q9NZV8 630 aa22.59■■□□□ 1.21
PNKP-211ENST00000598020 COL4A3BPQ9Y5P4 624 aa22.59■■□□□ 1.21
PNKP-211ENST00000598020 PLA2G4BP0C869 781 aa22.58■■□□□ 1.21
PNKP-211ENST00000598020 GHRP10912 638 aa22.58■■□□□ 1.21
PNKP-211ENST00000598020 ACTN1P12814 892 aa22.58■■□□□ 1.21
PNKP-211ENST00000598020 SLC12A3P55017 1021 aa22.58■■□□□ 1.21
PNKP-211ENST00000598020 SHHQ15465 462 aa22.58■■□□□ 1.21
PNKP-211ENST00000598020 C9orf50Q5SZB4 431 aa22.58■■□□□ 1.21
PNKP-211ENST00000598020 RINT1Q6NUQ1 792 aa22.58■■□□□ 1.21
PNKP-211ENST00000598020 C1orf186Q6ZWK4 172 aa22.58■■□□□ 1.21
PNKP-211ENST00000598020 RHPN2Q8IUC4 686 aa22.58■■□□□ 1.21
PNKP-211ENST00000598020 DBF4BQ8NFT6 615 aa22.58■■□□□ 1.21
PNKP-211ENST00000598020 RASSF8Q8NHQ8 419 aa22.58■■□□□ 1.21
PNKP-211ENST00000598020 LRRC15Q8TF66 581 aa22.58■■□□□ 1.21
PNKP-211ENST00000598020 SEPT8Q92599 483 aa22.58■■□□□ 1.21
PNKP-211ENST00000598020 RAD54LQ92698 747 aa22.58■■□□□ 1.21
PNKP-211ENST00000598020 APBB2Q92870 758 aa22.58■■□□□ 1.21
PNKP-211ENST00000598020 BMP2KQ9NSY1 1161 aaPredicted RBP22.58■■□□□ 1.21
PNKP-211ENST00000598020 STK17AQ9UEE5 414 aa22.58■■□□□ 1.21
PNKP-211ENST00000598020 BAIAP3O94812 1187 aa22.57■■□□□ 1.2
PNKP-211ENST00000598020 EIF4BP23588 611 aaKnown RBP22.57■■□□□ 1.2
PNKP-211ENST00000598020 POU5F1BQ06416 359 aa22.57■■□□□ 1.2
PNKP-211ENST00000598020 LAMTOR4Q0VGL1 99 aa22.57■■□□□ 1.2
PNKP-211ENST00000598020 ADALQ6DHV7 355 aa22.57■■□□□ 1.2
PNKP-211ENST00000598020 CCDC73Q6ZRK6 1079 aa22.57■■□□□ 1.2
PNKP-211ENST00000598020 TMEM40Q8WWA1 233 aa22.57■■□□□ 1.2
PNKP-211ENST00000598020 OSMRQ99650 979 aa22.57■■□□□ 1.2
PNKP-211ENST00000598020 TIPINQ9BVW5 301 aa22.57■■□□□ 1.2
PNKP-211ENST00000598020 IFIH1Q9BYX4 1025 aaKnown RBP22.57■■□□□ 1.2
PNKP-211ENST00000598020 AGO3Q9H9G7 860 aaKnown RBP22.57■■□□□ 1.2
PNKP-211ENST00000598020 GINS2Q9Y248 185 aa22.57■■□□□ 1.2
PNKP-211ENST00000598020 ABHD14A-ACY1A0A1B0GW23 586 aa22.56■■□□□ 1.2
PNKP-211ENST00000598020 EFCAB14O75071 495 aa22.56■■□□□ 1.2
PNKP-211ENST00000598020 DARSP14868 501 aaKnown RBP22.56■■□□□ 1.2
PNKP-211ENST00000598020 GUCY2CP25092 1073 aa22.56■■□□□ 1.2
PNKP-211ENST00000598020 NAALADL2Q58DX5 795 aa22.56■■□□□ 1.2
PNKP-211ENST00000598020 ODR4Q5SWX8 454 aa22.56■■□□□ 1.2
PNKP-211ENST00000598020 RRAGBQ5VZM2 374 aa22.56■■□□□ 1.2
PNKP-211ENST00000598020 RESP18Q5W5W9 173 aa22.56■■□□□ 1.2
PNKP-211ENST00000598020 NLRP7Q8WX94 980 aa22.56■■□□□ 1.2
PNKP-211ENST00000598020 GCOM2Q9BZD3 368 aaPredicted RBP22.56■■□□□ 1.2
PNKP-211ENST00000598020 MTIF3Q9H2K0 278 aaKnown RBP22.56■■□□□ 1.2
PNKP-211ENST00000598020 IFT122Q9HBG6 1241 aa22.56■■□□□ 1.2
PNKP-211ENST00000598020 NOC2LQ9Y3T9 749 aaKnown RBP22.56■■□□□ 1.2
PNKP-211ENST00000598020 TRIOBPQ9H2D6 2365 aa22.56■■□□□ 1.2
PNKP-211ENST00000598020 A0A087WZ62 844 aa22.55■■□□□ 1.2
PNKP-211ENST00000598020 RPS6KA5O75582 802 aa22.55■■□□□ 1.2
PNKP-211ENST00000598020 GLRA2P23416 452 aa22.55■■□□□ 1.2
PNKP-211ENST00000598020 IKBKEQ14164 716 aa22.55■■□□□ 1.2
PNKP-211ENST00000598020 TCTN1Q2MV58 587 aa22.55■■□□□ 1.2
PNKP-211ENST00000598020 OTOP2Q7RTS6 562 aa22.55■■□□□ 1.2
PNKP-211ENST00000598020 IFNLR1Q8IU57 520 aaPredicted RBP22.55■■□□□ 1.2
PNKP-211ENST00000598020 KSR1Q8IVT5 923 aa22.55■■□□□ 1.2
PNKP-211ENST00000598020 ASAP3Q8TDY4 903 aa22.55■■□□□ 1.2
PNKP-211ENST00000598020 LARP4BQ92615 738 aaKnown RBP22.55■■□□□ 1.2
PNKP-211ENST00000598020 KIFAP3Q92845 792 aa22.55■■□□□ 1.2
PNKP-211ENST00000598020 PPP1R16BQ96T49 567 aa22.55■■□□□ 1.2
PNKP-211ENST00000598020 FDXACB1Q9BRP7 624 aaPredicted RBP22.55■■□□□ 1.2
PNKP-211ENST00000598020 RUSC1Q9BVN2 902 aa22.55■■□□□ 1.2
PNKP-211ENST00000598020 INO80BQ9C086 356 aaPredicted RBP22.55■■□□□ 1.2
PNKP-211ENST00000598020 POLR3FQ9H1D9 316 aaPredicted RBP22.55■■□□□ 1.2
PNKP-211ENST00000598020 ERVK-5Q9HDB9 667 aa22.55■■□□□ 1.2
PNKP-211ENST00000598020 PADI3Q9ULW8 664 aa22.55■■□□□ 1.2
PNKP-211ENST00000598020 A0A087X0B3 334 aa22.54■■□□□ 1.2
PNKP-211ENST00000598020 GPR182O15218 404 aa22.54■■□□□ 1.2
PNKP-211ENST00000598020 CMA1P23946 247 aa22.54■■□□□ 1.2
PNKP-211ENST00000598020 CD52P31358 61 aa22.54■■□□□ 1.2
PNKP-211ENST00000598020 PAK2Q13177 524 aa22.54■■□□□ 1.2
PNKP-211ENST00000598020 TFDP1Q14186 410 aa22.54■■□□□ 1.2
PNKP-211ENST00000598020 FAM102BQ5T8I3 360 aa22.54■■□□□ 1.2
PNKP-211ENST00000598020 SRGAP1Q7Z6B7 1085 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms