RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 SPRED2Q7Z698 418 aa23.55■■□□□ 1.36
PNKP-209ENST00000596726 CATSPER3Q86XQ3 398 aa23.55■■□□□ 1.36
PNKP-209ENST00000596726 ZNF668Q96K58 619 aaPredicted RBP23.55■■□□□ 1.36
PNKP-209ENST00000596726 RC3H2Q9HBD1 1191 aaKnown RBP23.55■■□□□ 1.36
PNKP-209ENST00000596726 EYSQ5T1H1 3165 aa23.54■■□□□ 1.36
PNKP-209ENST00000596726 GAS2O43903 313 aaKnown RBP23.54■■□□□ 1.36
PNKP-209ENST00000596726 RPA1P27694 616 aa23.54■■□□□ 1.36
PNKP-209ENST00000596726 PRPHP41219 470 aa23.54■■□□□ 1.36
PNKP-209ENST00000596726 POLGP54098 1239 aaPredicted RBP23.54■■□□□ 1.36
PNKP-209ENST00000596726 PDIA5Q14554 519 aa23.54■■□□□ 1.36
PNKP-209ENST00000596726 DSC3Q14574 896 aa23.54■■□□□ 1.36
PNKP-209ENST00000596726 RGS18Q9NS28 235 aa23.54■■□□□ 1.36
PNKP-209ENST00000596726 EPOPA6NHQ4 379 aa23.53■■□□□ 1.36
PNKP-209ENST00000596726 PDCP20941 246 aa23.53■■□□□ 1.36
PNKP-209ENST00000596726 RARRES1P49788 294 aa23.53■■□□□ 1.36
PNKP-209ENST00000596726 ERVK-21P61565 698 aa23.53■■□□□ 1.36
PNKP-209ENST00000596726 ADGRE1Q14246 886 aa23.53■■□□□ 1.36
PNKP-209ENST00000596726 EMC2Q15006 297 aa23.53■■□□□ 1.36
PNKP-209ENST00000596726 ZNF410Q86VK4 478 aa23.53■■□□□ 1.36
PNKP-209ENST00000596726 RHPN2Q8IUC4 686 aa23.53■■□□□ 1.36
PNKP-209ENST00000596726 IGSF22Q8N9C0 903 aa23.53■■□□□ 1.36
PNKP-209ENST00000596726 ERMNQ8TAM6 284 aa23.53■■□□□ 1.36
PNKP-209ENST00000596726 PIGOQ8TEQ8 1089 aa23.53■■□□□ 1.36
PNKP-209ENST00000596726 NLRP7Q8WX94 980 aa23.53■■□□□ 1.36
PNKP-209ENST00000596726 ZNF689Q96CS4 500 aaPredicted RBP23.53■■□□□ 1.36
PNKP-209ENST00000596726 YME1L1Q96TA2 773 aa23.53■■□□□ 1.36
PNKP-209ENST00000596726 GAS2L1Q99501 681 aaPredicted RBP23.53■■□□□ 1.36
PNKP-209ENST00000596726 CERS4Q9HA82 394 aa23.53■■□□□ 1.36
PNKP-209ENST00000596726 XPNPEP1Q9NQW7 623 aa23.53■■□□□ 1.36
PNKP-209ENST00000596726 NLRC5Q86WI3 1866 aa23.52■■□□□ 1.36
PNKP-209ENST00000596726 A0A087WWV3 80 aa23.52■■□□□ 1.36
PNKP-209ENST00000596726 A0A087WZ62 844 aa23.52■■□□□ 1.36
PNKP-209ENST00000596726 MUTP22033 750 aa23.52■■□□□ 1.36
PNKP-209ENST00000596726 SARSP49591 514 aaKnown RBP23.52■■□□□ 1.36
PNKP-209ENST00000596726 IL17AQ16552 155 aa23.52■■□□□ 1.36
PNKP-209ENST00000596726 NPAS4Q8IUM7 802 aa23.52■■□□□ 1.36
PNKP-209ENST00000596726 KSR1Q8IVT5 923 aa23.52■■□□□ 1.36
PNKP-209ENST00000596726 TCP11Q8WWU5 503 aa23.52■■□□□ 1.36
PNKP-209ENST00000596726 TMEM143Q96AN5 459 aa23.52■■□□□ 1.36
PNKP-209ENST00000596726 ADAM2Q99965 735 aa23.52■■□□□ 1.36
PNKP-209ENST00000596726 FDXACB1Q9BRP7 624 aaPredicted RBP23.52■■□□□ 1.36
PNKP-209ENST00000596726 GCOM2Q9BZD3 368 aaPredicted RBP23.52■■□□□ 1.36
PNKP-209ENST00000596726 C1orf112Q9NSG2 853 aa23.52■■□□□ 1.36
PNKP-209ENST00000596726 LRWD1Q9UFC0 647 aa23.52■■□□□ 1.36
PNKP-209ENST00000596726 C9IYK1 514 aa23.51■■□□□ 1.35
PNKP-209ENST00000596726 DGKIO75912 1065 aa23.51■■□□□ 1.35
PNKP-209ENST00000596726 FAM189BP81408 668 aa23.51■■□□□ 1.35
PNKP-209ENST00000596726 ATP2C1P98194 919 aaPredicted RBP23.51■■□□□ 1.35
PNKP-209ENST00000596726 BRAPQ7Z569 592 aa23.51■■□□□ 1.35
PNKP-209ENST00000596726 PRPF31Q8WWY3 499 aaKnown RBP23.51■■□□□ 1.35
PNKP-209ENST00000596726 PSPC1Q8WXF1 523 aaKnown RBP23.51■■□□□ 1.35
PNKP-209ENST00000596726 ARNTL2Q8WYA1 636 aa23.51■■□□□ 1.35
PNKP-209ENST00000596726 SCLT1Q96NL6 688 aa23.51■■□□□ 1.35
PNKP-209ENST00000596726 NACC1Q96RE7 527 aa23.51■■□□□ 1.35
PNKP-209ENST00000596726 TGS1Q96RS0 853 aaKnown RBP23.51■■□□□ 1.35
PNKP-209ENST00000596726 MTRQ99707 1265 aa23.51■■□□□ 1.35
PNKP-209ENST00000596726 DBR1Q9UK59 544 aaKnown RBP23.51■■□□□ 1.35
PNKP-209ENST00000596726 COL4A3BPQ9Y5P4 624 aa23.51■■□□□ 1.35
PNKP-209ENST00000596726 RALGAPA2Q2PPJ7 1873 aa23.51■■□□□ 1.35
PNKP-209ENST00000596726 DENND3A2RUS2 1198 aa23.5■■□□□ 1.35
PNKP-209ENST00000596726 RFXAPO00287 272 aa23.5■■□□□ 1.35
PNKP-209ENST00000596726 ASAP2O43150 1006 aa23.5■■□□□ 1.35
PNKP-209ENST00000596726 DGAT1O75907 488 aa23.5■■□□□ 1.35
PNKP-209ENST00000596726 POU3F3P20264 500 aaPredicted RBP23.5■■□□□ 1.35
PNKP-209ENST00000596726 SYT1P21579 422 aa23.5■■□□□ 1.35
PNKP-209ENST00000596726 HAUS3Q68CZ6 603 aa23.5■■□□□ 1.35
PNKP-209ENST00000596726 DTHD1Q6ZMT9 781 aa23.5■■□□□ 1.35
PNKP-209ENST00000596726 SLC24A5Q71RS6 500 aa23.5■■□□□ 1.35
PNKP-209ENST00000596726 IFT122Q9HBG6 1241 aa23.5■■□□□ 1.35
PNKP-209ENST00000596726 BMP2KQ9NSY1 1161 aaPredicted RBP23.5■■□□□ 1.35
PNKP-209ENST00000596726 FNDC1Q4ZHG4 1894 aaPredicted RBP23.49■■□□□ 1.35
PNKP-209ENST00000596726 PRUNE2Q8WUY3 3088 aa23.49■■□□□ 1.35
PNKP-209ENST00000596726 COL4A4P53420 1690 aaPredicted RBP23.49■■□□□ 1.35
PNKP-209ENST00000596726 VPS37CA5D8V6 355 aaPredicted RBP23.49■■□□□ 1.35
PNKP-209ENST00000596726 CSDE1O75534 798 aaKnown RBP23.49■■□□□ 1.35
PNKP-209ENST00000596726 STAG3L1P0CL83 205 aa23.49■■□□□ 1.35
PNKP-209ENST00000596726 FGFR4P22455 802 aa23.49■■□□□ 1.35
PNKP-209ENST00000596726 LAMTOR4Q0VGL1 99 aa23.49■■□□□ 1.35
PNKP-209ENST00000596726 ECM1Q16610 540 aa23.49■■□□□ 1.35
PNKP-209ENST00000596726 POTEGQ6S5H5 508 aa23.49■■□□□ 1.35
PNKP-209ENST00000596726 FERMT3Q86UX7 667 aa23.49■■□□□ 1.35
PNKP-209ENST00000596726 MAFAQ8NHW3 353 aaPredicted RBP23.49■■□□□ 1.35
PNKP-209ENST00000596726 NLRP4Q96MN2 994 aa23.49■■□□□ 1.35
PNKP-209ENST00000596726 RAB34Q9BZG1 259 aa23.49■■□□□ 1.35
PNKP-209ENST00000596726 INO80BQ9C086 356 aaPredicted RBP23.49■■□□□ 1.35
PNKP-209ENST00000596726 ATP6V0A4Q9HBG4 840 aa23.49■■□□□ 1.35
PNKP-209ENST00000596726 STK24Q9Y6E0 443 aa23.49■■□□□ 1.35
PNKP-209ENST00000596726 C17orf80Q9BSJ5 609 aa23.48■■□□□ 1.35
PNKP-209ENST00000596726 ADGRA3Q8IWK6 1321 aa23.48■■□□□ 1.35
PNKP-209ENST00000596726 LPXNO60711 386 aa23.47■■□□□ 1.35
PNKP-209ENST00000596726 LINC00271P0C7V0 271 aa23.47■■□□□ 1.35
PNKP-209ENST00000596726 ARL2P36404 184 aa23.47■■□□□ 1.35
PNKP-209ENST00000596726 CCT6AP40227 531 aaKnown RBP23.47■■□□□ 1.35
PNKP-209ENST00000596726 ARL6IP4Q66PJ3 421 aaKnown RBP23.47■■□□□ 1.35
PNKP-209ENST00000596726 FIBCD1Q8N539 461 aa23.47■■□□□ 1.35
PNKP-209ENST00000596726 CCDC43Q96MW1 224 aaKnown RBP23.47■■□□□ 1.35
PNKP-209ENST00000596726 SAMD11Q96NU1 681 aa23.47■■□□□ 1.35
PNKP-209ENST00000596726 ELAC1Q9H777 363 aaKnown RBP23.47■■□□□ 1.35
PNKP-209ENST00000596726 FOXD4L1Q9NU39 408 aa23.47■■□□□ 1.35
PNKP-209ENST00000596726 RNF216Q9NWF9 866 aaPredicted RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms