RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 ZBTB42B2RXF5 422 aa15.4■□□□□ 0.06
TRAF4-215ENST00000584944 E9PMD0 336 aa15.4■□□□□ 0.06
TRAF4-215ENST00000584944 RFC2P35250 354 aa15.4■□□□□ 0.06
TRAF4-215ENST00000584944 MRPS6P82932 125 aaKnown RBP15.4■□□□□ 0.06
TRAF4-215ENST00000584944 TMEM62Q0P6H9 643 aa15.4■□□□□ 0.06
TRAF4-215ENST00000584944 TFDP1Q14186 410 aa15.4■□□□□ 0.06
TRAF4-215ENST00000584944 MAEAQ7L5Y9 396 aa15.4■□□□□ 0.06
TRAF4-215ENST00000584944 RPUSD2Q8IZ73 545 aaKnown RBP15.4■□□□□ 0.06
TRAF4-215ENST00000584944 ZBTB10Q96DT7 871 aa15.4■□□□□ 0.06
TRAF4-215ENST00000584944 GBP4Q96PP9 640 aa15.4■□□□□ 0.06
TRAF4-215ENST00000584944 MMTAG2Q9BU76 263 aaKnown RBP15.4■□□□□ 0.06
TRAF4-215ENST00000584944 GDPD2Q9HCC8 539 aa15.4■□□□□ 0.06
TRAF4-215ENST00000584944 STK17AQ9UEE5 414 aa15.4■□□□□ 0.06
TRAF4-215ENST00000584944 GOLGA6L22H0YM25 854 aa15.39■□□□□ 0.05
TRAF4-215ENST00000584944 VTNP04004 478 aa15.39■□□□□ 0.05
TRAF4-215ENST00000584944 PLA2G4BP0C869 781 aa15.39■□□□□ 0.05
TRAF4-215ENST00000584944 ADAM17P78536 824 aa15.39■□□□□ 0.05
TRAF4-215ENST00000584944 GRB10Q13322 594 aa15.39■□□□□ 0.05
TRAF4-215ENST00000584944 HIC1Q14526 733 aa15.39■□□□□ 0.05
TRAF4-215ENST00000584944 MXD4Q14582 209 aaPredicted RBP15.39■□□□□ 0.05
TRAF4-215ENST00000584944 TARBP2Q15633 366 aaKnown RBP15.39■□□□□ 0.05
TRAF4-215ENST00000584944 ODR4Q5SWX8 454 aa15.39■□□□□ 0.05
TRAF4-215ENST00000584944 HYIQ5T013 277 aa15.39■□□□□ 0.05
TRAF4-215ENST00000584944 ZNF618Q5T7W0 954 aa15.39■□□□□ 0.05
TRAF4-215ENST00000584944 ADALQ6DHV7 355 aa15.39■□□□□ 0.05
TRAF4-215ENST00000584944 ZNF365Q70YC5 407 aa15.39■□□□□ 0.05
TRAF4-215ENST00000584944 RHPN2Q8IUC4 686 aa15.39■□□□□ 0.05
TRAF4-215ENST00000584944 CEP57L1Q8IYX8 460 aa15.39■□□□□ 0.05
TRAF4-215ENST00000584944 IQUBQ8NA54 791 aa15.39■□□□□ 0.05
TRAF4-215ENST00000584944 TMEM143Q96AN5 459 aa15.39■□□□□ 0.05
TRAF4-215ENST00000584944 TIFAQ96CG3 184 aa15.39■□□□□ 0.05
TRAF4-215ENST00000584944 CHAMP1Q96JM3 812 aa15.39■□□□□ 0.05
TRAF4-215ENST00000584944 IFT74Q96LB3 600 aa15.39■□□□□ 0.05
TRAF4-215ENST00000584944 PPP1R16BQ96T49 567 aa15.39■□□□□ 0.05
TRAF4-215ENST00000584944 LRRC27Q9C0I9 530 aa15.39■□□□□ 0.05
TRAF4-215ENST00000584944 ZNF576Q9H609 170 aa15.39■□□□□ 0.05
TRAF4-215ENST00000584944 MYH15Q9Y2K3 1946 aa15.39■□□□□ 0.05
TRAF4-215ENST00000584944 GRXCR1A8MXD5 290 aa15.38■□□□□ 0.05
TRAF4-215ENST00000584944 TBCAO75347 108 aaKnown RBP15.38■□□□□ 0.05
TRAF4-215ENST00000584944 STBD1O95210 358 aa15.38■□□□□ 0.05
TRAF4-215ENST00000584944 ACRP10323 421 aa15.38■□□□□ 0.05
TRAF4-215ENST00000584944 ACTN1P12814 892 aa15.38■□□□□ 0.05
TRAF4-215ENST00000584944 AMPD3Q01432 767 aa15.38■□□□□ 0.05
TRAF4-215ENST00000584944 TMEM119Q4V9L6 283 aa15.38■□□□□ 0.05
TRAF4-215ENST00000584944 PSRC1Q6PGN9 363 aaPredicted RBP15.38■□□□□ 0.05
TRAF4-215ENST00000584944 SV2BQ7L1I2 683 aa15.38■□□□□ 0.05
TRAF4-215ENST00000584944 DEFB128Q7Z7B8 93 aa15.38■□□□□ 0.05
TRAF4-215ENST00000584944 GPBP1Q86WP2 473 aa15.38■□□□□ 0.05
TRAF4-215ENST00000584944 KIAA0319LQ8IZA0 1049 aa15.38■□□□□ 0.05
TRAF4-215ENST00000584944 LARP4BQ92615 738 aaKnown RBP15.38■□□□□ 0.05
TRAF4-215ENST00000584944 DHX38Q92620 1227 aaKnown RBP15.38■□□□□ 0.05
TRAF4-215ENST00000584944 SCLYQ96I15 445 aa15.38■□□□□ 0.05
TRAF4-215ENST00000584944 DRC1Q96MC2 740 aa15.38■□□□□ 0.05
TRAF4-215ENST00000584944 NLRP4Q96MN2 994 aa15.38■□□□□ 0.05
TRAF4-215ENST00000584944 MTIF3Q9H2K0 278 aaKnown RBP15.38■□□□□ 0.05
TRAF4-215ENST00000584944 DHX33Q9H6R0 707 aaKnown RBP15.38■□□□□ 0.05
TRAF4-215ENST00000584944 IL23AQ9NPF7 189 aa15.38■□□□□ 0.05
TRAF4-215ENST00000584944 KCND2Q9NZV8 630 aa15.38■□□□□ 0.05
TRAF4-215ENST00000584944 KCNH3Q9ULD8 1083 aa15.38■□□□□ 0.05
TRAF4-215ENST00000584944 TRPV2Q9Y5S1 764 aa15.38■□□□□ 0.05
TRAF4-215ENST00000584944 CDY2AQ9Y6F7 541 aa15.38■□□□□ 0.05
TRAF4-215ENST00000584944 ASAP2O43150 1006 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 IQCF3P0C7M6 154 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 SRGAP2CP0DJJ0 459 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 CYP11B2P19099 503 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 CMA1P23946 247 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 PBX2P40425 430 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 NLRP11P59045 1033 aaKnown RBP15.37■□□□□ 0.05
TRAF4-215ENST00000584944 PPP2R5AQ15172 486 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 ECM1Q16610 540 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 KIZQ2M2Z5 673 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 RESP18Q5W5W9 173 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 USP49Q70CQ1 688 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 RPAINQ86UA6 219 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 FSIP1Q8NA03 581 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 PRPF31Q8WWY3 499 aaKnown RBP15.37■□□□□ 0.05
TRAF4-215ENST00000584944 HERVK_113Q902F9 699 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 MRPS27Q92552 414 aaKnown RBP15.37■□□□□ 0.05
TRAF4-215ENST00000584944 RAD54LQ92698 747 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 KIFAP3Q92845 792 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 DHX58Q96C10 678 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 PNMA5Q96PV4 448 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 TIPINQ9BVW5 301 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 PBX4Q9BYU1 374 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 CELF4Q9BZC1 486 aaKnown RBP15.37■□□□□ 0.05
TRAF4-215ENST00000584944 GCOM2Q9BZD3 368 aaPredicted RBP15.37■□□□□ 0.05
TRAF4-215ENST00000584944 INO80BQ9C086 356 aaPredicted RBP15.37■□□□□ 0.05
TRAF4-215ENST00000584944 POLR3FQ9H1D9 316 aaPredicted RBP15.37■□□□□ 0.05
TRAF4-215ENST00000584944 CUEDC2Q9H467 287 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 ZHX3Q9H4I2 956 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 COL4A3BPQ9Y5P4 624 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 TTC28Q96AY4 2481 aa15.37■□□□□ 0.05
TRAF4-215ENST00000584944 POLR2DO15514 142 aaKnown RBP15.36■□□□□ 0.05
TRAF4-215ENST00000584944 PFKMP08237 780 aa15.36■□□□□ 0.05
TRAF4-215ENST00000584944 PHKA2P46019 1235 aa15.36■□□□□ 0.05
TRAF4-215ENST00000584944 RBL2Q08999 1139 aa15.36■□□□□ 0.05
TRAF4-215ENST00000584944 NCBP1Q09161 790 aaKnown RBP15.36■□□□□ 0.05
TRAF4-215ENST00000584944 RAD51AP2Q09MP3 1159 aa15.36■□□□□ 0.05
TRAF4-215ENST00000584944 PAK2Q13177 524 aa15.36■□□□□ 0.05
TRAF4-215ENST00000584944 AXDND1Q5T1B0 1012 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms