RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 OSBPL1AQ9BXW6 950 aa7.06□□□□□ -1.28
SCFD1-208ENST00000553278 ATP13A1Q9HD20 1204 aa7.06□□□□□ -1.28
SCFD1-208ENST00000553278 ASH2LQ9UBL3 628 aa7.06□□□□□ -1.28
SCFD1-208ENST00000553278 FBXO9Q9UK97 447 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-208ENST00000553278 TELO2Q9Y4R8 837 aa7.06□□□□□ -1.28
SCFD1-208ENST00000553278 ASB1Q9Y576 335 aa7.06□□□□□ -1.28
SCFD1-208ENST00000553278 DGKBQ9Y6T7 804 aa7.06□□□□□ -1.28
SCFD1-208ENST00000553278 CNTNAP5Q8WYK1 1306 aa7.05□□□□□ -1.28
SCFD1-208ENST00000553278 NTRK1P04629 796 aa7.05□□□□□ -1.28
SCFD1-208ENST00000553278 MMEP08473 750 aa7.05□□□□□ -1.28
SCFD1-208ENST00000553278 KIR2DL1P43626 348 aaPredicted RBP7.05□□□□□ -1.28
SCFD1-208ENST00000553278 KIR2DL2P43627 348 aaPredicted RBP7.05□□□□□ -1.28
SCFD1-208ENST00000553278 RENBPP51606 427 aa7.05□□□□□ -1.28
SCFD1-208ENST00000553278 CDK17Q00537 523 aa7.05□□□□□ -1.28
SCFD1-208ENST00000553278 POLD3Q15054 466 aaPredicted RBP7.05□□□□□ -1.28
SCFD1-208ENST00000553278 KIAA1841Q6NSI8 718 aa7.05□□□□□ -1.28
SCFD1-208ENST00000553278 PCGF5Q86SE9 256 aa7.05□□□□□ -1.28
SCFD1-208ENST00000553278 CABP7Q86V35 215 aa7.05□□□□□ -1.28
SCFD1-208ENST00000553278 OR2C3Q8N628 320 aa7.05□□□□□ -1.28
SCFD1-208ENST00000553278 TSPEARQ8WU66 669 aa7.05□□□□□ -1.28
SCFD1-208ENST00000553278 FATE1Q969F0 183 aa7.05□□□□□ -1.28
SCFD1-208ENST00000553278 LRFN3Q9BTN0 628 aa7.05□□□□□ -1.28
SCFD1-208ENST00000553278 WDR12Q9GZL7 423 aaKnown RBP7.05□□□□□ -1.28
SCFD1-208ENST00000553278 LRRC4CQ9HCJ2 640 aa7.05□□□□□ -1.28
SCFD1-208ENST00000553278 PDLIM7Q9NR12 457 aa7.05□□□□□ -1.28
SCFD1-208ENST00000553278 STXBP5LQ9Y2K9 1186 aa7.05□□□□□ -1.28
SCFD1-208ENST00000553278 PCDHB4Q9Y5E5 795 aa7.05□□□□□ -1.28
SCFD1-208ENST00000553278 A0A1W2PQJ5 194 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 CFAP69A5D8W1 941 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 RHPN2P1A8MT19 583 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 GOLGA6L22H0YM25 854 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 HTRA2O43464 458 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-208ENST00000553278 SLC26A4O43511 780 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 GDF11O95390 407 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 PRIM2P49643 509 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 RTP1P59025 263 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 ADCY2Q08462 1091 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 FOXD4Q12950 439 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-208ENST00000553278 MALLQ13021 153 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 CPSF6Q16630 551 aaKnown RBP eCLIP7.04□□□□□ -1.28
SCFD1-208ENST00000553278 PRR16Q569H4 304 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 DGKKQ5KSL6 1271 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 XP32Q5T750 250 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 THEMIS2Q5TEJ8 643 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 PRAMEF9Q5VWM5 478 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 RNF43Q68DV7 783 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 KLHDC10Q6PID8 442 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 RTN4RL1Q86UN2 441 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-208ENST00000553278 DCP2Q8IU60 420 aaKnown RBP7.04□□□□□ -1.28
SCFD1-208ENST00000553278 CILP2Q8IUL8 1156 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 OR14C36Q8NHC7 312 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 NETO1Q8TDF5 533 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 SEC14L1Q92503 715 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 ASIC4Q96FT7 647 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 PDGFDQ9GZP0 370 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-208ENST00000553278 AP5M1Q9H0R1 490 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 VPS11Q9H270 941 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 ZHX3Q9H4I2 956 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 LIMCH1Q9UPQ0 1083 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 TAF6LQ9Y6J9 622 aa7.04□□□□□ -1.28
SCFD1-208ENST00000553278 COL6A1P12109 1028 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 EDNRBP24530 442 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 TACR1P25103 407 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 MAN1A1P33908 653 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 PIK3CBP42338 1070 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 WASP42768 502 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 CCT2P78371 535 aaKnown RBP7.03□□□□□ -1.28
SCFD1-208ENST00000553278 GPSM2P81274 684 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 TNFAIP2Q03169 654 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 ROM1Q03395 351 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 TRIM25Q14258 630 aaKnown RBP7.03□□□□□ -1.28
SCFD1-208ENST00000553278 ELF2Q15723 593 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 CCDC157Q569K6 752 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 SLFN12LQ6IEE8 588 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 MMS22LQ6ZRQ5 1243 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 MAEAQ7L5Y9 396 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 ALYREFQ86V81 257 aaKnown RBP7.03□□□□□ -1.28
SCFD1-208ENST00000553278 NRG4Q8WWG1 115 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 ASB11Q8WXH4 323 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 CLEC4DQ8WXI8 215 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 HDAC10Q969S8 669 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 FOXRED1Q96CU9 486 aaPredicted RBP7.03□□□□□ -1.28
SCFD1-208ENST00000553278 G6PC3Q9BUM1 346 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 BTBD1Q9H0C5 482 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 PRDM12Q9H4Q4 367 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 DMRT3Q9NQL9 472 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 BCCIPQ9P287 314 aaKnown RBP eCLIP7.03□□□□□ -1.28
SCFD1-208ENST00000553278 IMPACTQ9P2X3 320 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 TMPRSS11EQ9UL52 423 aa7.03□□□□□ -1.28
SCFD1-208ENST00000553278 CFAP20Q9Y6A4 193 aaKnown RBP7.03□□□□□ -1.28
SCFD1-208ENST00000553278 PRAMEF22A3QJZ6 481 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 MAFGO15525 162 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 PRLP01236 227 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 RPLP2P05387 115 aaKnown RBP7.02□□□□□ -1.29
SCFD1-208ENST00000553278 PFKMP08237 780 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 RPL17P18621 184 aaKnown RBP7.02□□□□□ -1.29
SCFD1-208ENST00000553278 TNFSF4P23510 183 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 BDNFP23560 247 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 COL8A1P27658 744 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 GRK6P43250 576 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms