RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 FMR1NBQ8N0W7 255 aaPredicted RBP19.07■□□□□ 0.64
ITGA5-213ENST00000553071 LRRC71Q8N4P6 559 aa19.07■□□□□ 0.64
ITGA5-213ENST00000553071 USP38Q8NB14 1042 aa19.07■□□□□ 0.64
ITGA5-213ENST00000553071 NOC4LQ9BVI4 516 aaKnown RBP19.07■□□□□ 0.64
ITGA5-213ENST00000553071 INO80BQ9C086 356 aaPredicted RBP19.07■□□□□ 0.64
ITGA5-213ENST00000553071 LARSQ9P2J5 1176 aaKnown RBP19.07■□□□□ 0.64
ITGA5-213ENST00000553071 SERTAD1Q9UHV2 236 aa19.07■□□□□ 0.64
ITGA5-213ENST00000553071 SQORQ9Y6N5 450 aa19.07■□□□□ 0.64
ITGA5-213ENST00000553071 PHLPP2Q6ZVD8 1323 aa19.06■□□□□ 0.64
ITGA5-213ENST00000553071 WDR81Q562E7 1941 aa19.06■□□□□ 0.64
ITGA5-213ENST00000553071 RSPH10B2B2RC85 870 aa19.06■□□□□ 0.64
ITGA5-213ENST00000553071 GADD45BO75293 160 aaPredicted RBP19.06■□□□□ 0.64
ITGA5-213ENST00000553071 TBCAO75347 108 aaKnown RBP19.06■□□□□ 0.64
ITGA5-213ENST00000553071 TIMP1P01033 207 aa19.06■□□□□ 0.64
ITGA5-213ENST00000553071 RSPH10BP0C881 870 aa19.06■□□□□ 0.64
ITGA5-213ENST00000553071 CKBP12277 381 aa19.06■□□□□ 0.64
ITGA5-213ENST00000553071 ABCD1P33897 745 aa19.06■□□□□ 0.64
ITGA5-213ENST00000553071 ARL2P36404 184 aa19.06■□□□□ 0.64
ITGA5-213ENST00000553071 SMTNP53814 917 aa19.06■□□□□ 0.64
ITGA5-213ENST00000553071 MRPS6P82932 125 aaKnown RBP19.06■□□□□ 0.64
ITGA5-213ENST00000553071 TRIM71Q2Q1W2 868 aaKnown RBP19.06■□□□□ 0.64
ITGA5-213ENST00000553071 LONRF3Q496Y0 759 aa19.06■□□□□ 0.64
ITGA5-213ENST00000553071 CNNM4Q6P4Q7 775 aa19.06■□□□□ 0.64
ITGA5-213ENST00000553071 KRBA2Q6ZNG9 492 aa19.06■□□□□ 0.64
ITGA5-213ENST00000553071 SLC17A8Q8NDX2 589 aa19.06■□□□□ 0.64
ITGA5-213ENST00000553071 ENGASEQ8NFI3 743 aa19.06■□□□□ 0.64
ITGA5-213ENST00000553071 PRPF31Q8WWY3 499 aaKnown RBP19.06■□□□□ 0.64
ITGA5-213ENST00000553071 TMEM143Q96AN5 459 aa19.06■□□□□ 0.64
ITGA5-213ENST00000553071 RUSC1Q9BVN2 902 aa19.06■□□□□ 0.64
ITGA5-213ENST00000553071 CELF4Q9BZC1 486 aaKnown RBP19.06■□□□□ 0.64
ITGA5-213ENST00000553071 GOLPH3LQ9H4A5 285 aa19.06■□□□□ 0.64
ITGA5-213ENST00000553071 XPNPEP1Q9NQW7 623 aa19.06■□□□□ 0.64
ITGA5-213ENST00000553071 PRDM5Q9NQX1 630 aaPredicted RBP19.06■□□□□ 0.64
ITGA5-213ENST00000553071 LMBRD1Q9NUN5 540 aa19.06■□□□□ 0.64
ITGA5-213ENST00000553071 COL4A3BPQ9Y5P4 624 aa19.06■□□□□ 0.64
ITGA5-213ENST00000553071 BRCA2P51587 3418 aa19.05■□□□□ 0.64
ITGA5-213ENST00000553071 H0YCG3 227 aa19.05■□□□□ 0.64
ITGA5-213ENST00000553071 ACTN4O43707 911 aaKnown RBP19.05■□□□□ 0.64
ITGA5-213ENST00000553071 MCM4P33991 863 aa19.05■□□□□ 0.64
ITGA5-213ENST00000553071 RFC2P35250 354 aa19.05■□□□□ 0.64
ITGA5-213ENST00000553071 CRYBB1P53674 252 aaPredicted RBP19.05■□□□□ 0.64
ITGA5-213ENST00000553071 PCBP1Q15365 356 aaKnown RBP eCLIP19.05■□□□□ 0.64
ITGA5-213ENST00000553071 ARSHQ5FYA8 562 aa19.05■□□□□ 0.64
ITGA5-213ENST00000553071 RHPN2Q8IUC4 686 aa19.05■□□□□ 0.64
ITGA5-213ENST00000553071 C7orf61Q8IZ16 206 aa19.05■□□□□ 0.64
ITGA5-213ENST00000553071 TMEM199Q8N511 208 aa19.05■□□□□ 0.64
ITGA5-213ENST00000553071 DHX38Q92620 1227 aaKnown RBP19.05■□□□□ 0.64
ITGA5-213ENST00000553071 DDX12PQ92771 950 aa19.05■□□□□ 0.64
ITGA5-213ENST00000553071 CCDC47Q96A33 483 aaKnown RBP19.05■□□□□ 0.64
ITGA5-213ENST00000553071 SCLT1Q96NL6 688 aa19.05■□□□□ 0.64
ITGA5-213ENST00000553071 C7orf25Q9BPX7 421 aa19.05■□□□□ 0.64
ITGA5-213ENST00000553071 GCOM2Q9BZD3 368 aaPredicted RBP19.05■□□□□ 0.64
ITGA5-213ENST00000553071 POLR3FQ9H1D9 316 aaPredicted RBP19.05■□□□□ 0.64
ITGA5-213ENST00000553071 SEL1LQ9UBV2 794 aa19.05■□□□□ 0.64
ITGA5-213ENST00000553071 TRPV2Q9Y5S1 764 aa19.05■□□□□ 0.64
ITGA5-213ENST00000553071 LOXHD1Q8IVV2 1947 aa19.05■□□□□ 0.64
ITGA5-213ENST00000553071 HIP1RO75146 1068 aa19.04■□□□□ 0.64
ITGA5-213ENST00000553071 FAM13AO94988 1023 aa19.04■□□□□ 0.64
ITGA5-213ENST00000553071 MBD3O95983 291 aa19.04■□□□□ 0.64
ITGA5-213ENST00000553071 GAP43P17677 238 aa19.04■□□□□ 0.64
ITGA5-213ENST00000553071 NAMPTP43490 491 aa19.04■□□□□ 0.64
ITGA5-213ENST00000553071 NLRP11P59045 1033 aaKnown RBP19.04■□□□□ 0.64
ITGA5-213ENST00000553071 LAMTOR4Q0VGL1 99 aa19.04■□□□□ 0.64
ITGA5-213ENST00000553071 DMP1Q13316 513 aaPredicted RBP19.04■□□□□ 0.64
ITGA5-213ENST00000553071 MKRN4PQ13434 485 aaPredicted RBP19.04■□□□□ 0.64
ITGA5-213ENST00000553071 SNW1Q13573 536 aaKnown RBP19.04■□□□□ 0.64
ITGA5-213ENST00000553071 GIT2Q14161 759 aa19.04■□□□□ 0.64
ITGA5-213ENST00000553071 LRRC8DQ7L1W4 858 aa19.04■□□□□ 0.64
ITGA5-213ENST00000553071 MAEAQ7L5Y9 396 aa19.04■□□□□ 0.64
ITGA5-213ENST00000553071 CCDC65Q8IXS2 484 aa19.04■□□□□ 0.64
ITGA5-213ENST00000553071 LRRC15Q8TF66 581 aa19.04■□□□□ 0.64
ITGA5-213ENST00000553071 NLRP7Q8WX94 980 aa19.04■□□□□ 0.64
ITGA5-213ENST00000553071 PAGE5Q96GU1 130 aa19.04■□□□□ 0.64
ITGA5-213ENST00000553071 TRIM9Q9C026 710 aa19.04■□□□□ 0.64
ITGA5-213ENST00000553071 C2orf40Q9H1Z8 148 aa19.04■□□□□ 0.64
ITGA5-213ENST00000553071 PARVGQ9HBI0 331 aa19.04■□□□□ 0.64
ITGA5-213ENST00000553071 PVALEFA0A1B0GWK0 134 aa19.03■□□□□ 0.64
ITGA5-213ENST00000553071 MYMKA6NI61 221 aa19.03■□□□□ 0.64
ITGA5-213ENST00000553071 VTNP04004 478 aa19.03■□□□□ 0.64
ITGA5-213ENST00000553071 IQCF3P0C7M6 154 aa19.03■□□□□ 0.64
ITGA5-213ENST00000553071 PLS3P13797 630 aa19.03■□□□□ 0.64
ITGA5-213ENST00000553071 PHKA2P46019 1235 aa19.03■□□□□ 0.64
ITGA5-213ENST00000553071 GPC3P51654 580 aa19.03■□□□□ 0.64
ITGA5-213ENST00000553071 ZNF618Q5T7W0 954 aa19.03■□□□□ 0.64
ITGA5-213ENST00000553071 MFSD5Q6N075 450 aa19.03■□□□□ 0.64
ITGA5-213ENST00000553071 SRGAP1Q7Z6B7 1085 aa19.03■□□□□ 0.64
ITGA5-213ENST00000553071 RPUSD2Q8IZ73 545 aaKnown RBP19.03■□□□□ 0.64
ITGA5-213ENST00000553071 SPIRE2Q8WWL2 714 aa19.03■□□□□ 0.64
ITGA5-213ENST00000553071 ZBTB10Q96DT7 871 aa19.03■□□□□ 0.64
ITGA5-213ENST00000553071 LBHD1Q9BQE6 289 aaPredicted RBP19.03■□□□□ 0.64
ITGA5-213ENST00000553071 REEP2Q9BRK0 252 aa19.03■□□□□ 0.64
ITGA5-213ENST00000553071 NTPCRQ9BSD7 190 aaKnown RBP19.03■□□□□ 0.64
ITGA5-213ENST00000553071 NFKBIZQ9BYH8 718 aa19.03■□□□□ 0.64
ITGA5-213ENST00000553071 CDY2AQ9Y6F7 541 aa19.03■□□□□ 0.64
ITGA5-213ENST00000553071 TRIM43BA6NCK2 446 aa19.02■□□□□ 0.64
ITGA5-213ENST00000553071 GTPBP6O43824 516 aaPredicted RBP19.02■□□□□ 0.64
ITGA5-213ENST00000553071 GPR32O75388 356 aa19.02■□□□□ 0.64
ITGA5-213ENST00000553071 NR1I2O75469 434 aa19.02■□□□□ 0.64
ITGA5-213ENST00000553071 AFMP43652 599 aa19.02■□□□□ 0.64
ITGA5-213ENST00000553071 ZNF131P52739 623 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms