RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 KRT12Q99456 494 aa27.14■■□□□ 1.94
RAB40C-204ENST00000538492 DMAC2Q9NW81 257 aa27.14■■□□□ 1.94
RAB40C-204ENST00000538492 ESYT3A0FGR9 886 aa27.14■■□□□ 1.94
RAB40C-204ENST00000538492 K7ENM7 598 aa27.14■■□□□ 1.94
RAB40C-204ENST00000538492 EXOC3O60645 756 aa27.14■■□□□ 1.94
RAB40C-204ENST00000538492 STAT1P42224 750 aa27.14■■□□□ 1.94
RAB40C-204ENST00000538492 PRPF38AQ8NAV1 312 aaKnown RBP27.14■■□□□ 1.94
RAB40C-204ENST00000538492 RAVER2Q9HCJ3 691 aaKnown RBP27.14■■□□□ 1.94
RAB40C-204ENST00000538492 DNAJC12Q9UKB3 198 aa27.14■■□□□ 1.94
RAB40C-204ENST00000538492 TISP43B9A030 160 aa27.13■■□□□ 1.93
RAB40C-204ENST00000538492 F8VZ95 297 aa27.13■■□□□ 1.93
RAB40C-204ENST00000538492 FERP16591 822 aa27.13■■□□□ 1.93
RAB40C-204ENST00000538492 ITGB3BPQ13352 177 aaPredicted RBP27.13■■□□□ 1.93
RAB40C-204ENST00000538492 BCS1LQ9Y276 419 aa27.13■■□□□ 1.93
RAB40C-204ENST00000538492 ZHX2Q9Y6X8 837 aa27.13■■□□□ 1.93
RAB40C-204ENST00000538492 EPHB4P54760 987 aa27.13■■□□□ 1.93
RAB40C-204ENST00000538492 RASA3Q14644 834 aa27.13■■□□□ 1.93
RAB40C-204ENST00000538492 DRAP1Q14919 205 aaPredicted RBP27.13■■□□□ 1.93
RAB40C-204ENST00000538492 NENFQ9UMX5 172 aa27.13■■□□□ 1.93
RAB40C-204ENST00000538492 DHX15O43143 795 aaKnown RBP27.12■■□□□ 1.93
RAB40C-204ENST00000538492 H2AFZP0C0S5 128 aa27.12■■□□□ 1.93
RAB40C-204ENST00000538492 GLE1Q53GS7 698 aaKnown RBP27.12■■□□□ 1.93
RAB40C-204ENST00000538492 MUM1L1Q5H9M0 696 aa27.12■■□□□ 1.93
RAB40C-204ENST00000538492 H2AFVQ71UI9 128 aa27.12■■□□□ 1.93
RAB40C-204ENST00000538492 LRRC57Q8N9N7 239 aa27.12■■□□□ 1.93
RAB40C-204ENST00000538492 DEFB129Q9H1M3 183 aa27.12■■□□□ 1.93
RAB40C-204ENST00000538492 PCIF1Q9H4Z3 704 aa27.12■■□□□ 1.93
RAB40C-204ENST00000538492 RPTORQ8N122 1335 aa27.12■■□□□ 1.93
RAB40C-204ENST00000538492 PHF20L1A8MW92 1017 aa27.12■■□□□ 1.93
RAB40C-204ENST00000538492 HEXIM1O94992 359 aaKnown RBP27.12■■□□□ 1.93
RAB40C-204ENST00000538492 KIF4AO95239 1232 aa27.12■■□□□ 1.93
RAB40C-204ENST00000538492 SOX5P35711 763 aa27.12■■□□□ 1.93
RAB40C-204ENST00000538492 GUCY2DQ02846 1103 aa27.12■■□□□ 1.93
RAB40C-204ENST00000538492 EPB41L5Q9HCM4 733 aa27.12■■□□□ 1.93
RAB40C-204ENST00000538492 MYOZ2Q9NPC6 264 aa27.12■■□□□ 1.93
RAB40C-204ENST00000538492 CALCOCO1Q9P1Z2 691 aa27.12■■□□□ 1.93
RAB40C-204ENST00000538492 TMCO5BA8MYB1 307 aa27.11■■□□□ 1.93
RAB40C-204ENST00000538492 PPP1R37O75864 691 aa27.11■■□□□ 1.93
RAB40C-204ENST00000538492 P4HBP07237 508 aaKnown RBP27.11■■□□□ 1.93
RAB40C-204ENST00000538492 MRPS9P82933 396 aaKnown RBP27.11■■□□□ 1.93
RAB40C-204ENST00000538492 ZSCAN26Q16670 478 aa27.11■■□□□ 1.93
RAB40C-204ENST00000538492 TKFCQ3LXA3 575 aa27.11■■□□□ 1.93
RAB40C-204ENST00000538492 GLYCTKQ8IVS8 523 aa27.11■■□□□ 1.93
RAB40C-204ENST00000538492 TPCN2Q8NHX9 752 aa27.11■■□□□ 1.93
RAB40C-204ENST00000538492 LNX1Q8TBB1 728 aaPredicted RBP27.11■■□□□ 1.93
RAB40C-204ENST00000538492 INTS2Q9H0H0 1204 aaKnown RBP27.11■■□□□ 1.93
RAB40C-204ENST00000538492 TMEM150BA6NC51 233 aa27.11■■□□□ 1.93
RAB40C-204ENST00000538492 BCRP11274 1271 aa27.11■■□□□ 1.93
RAB40C-204ENST00000538492 IFI16Q16666 785 aaKnown RBP27.11■■□□□ 1.93
RAB40C-204ENST00000538492 USP38Q8NB14 1042 aa27.11■■□□□ 1.93
RAB40C-204ENST00000538492 IFT81Q8WYA0 676 aa27.11■■□□□ 1.93
RAB40C-204ENST00000538492 ZBED3Q96IU2 234 aaPredicted RBP27.11■■□□□ 1.93
RAB40C-204ENST00000538492 STRA6Q9BX79 667 aa27.11■■□□□ 1.93
RAB40C-204ENST00000538492 STK33Q9BYT3 514 aa27.11■■□□□ 1.93
RAB40C-204ENST00000538492 EIF2AK2P19525 551 aaKnown RBP27.1■■□□□ 1.93
RAB40C-204ENST00000538492 CARSP49589 748 aaKnown RBP27.1■■□□□ 1.93
RAB40C-204ENST00000538492 MYL7Q01449 175 aa27.1■■□□□ 1.93
RAB40C-204ENST00000538492 MAP3K10Q02779 954 aa27.1■■□□□ 1.93
RAB40C-204ENST00000538492 BFSP1Q12934 665 aa27.1■■□□□ 1.93
RAB40C-204ENST00000538492 TNIP1Q15025 636 aa27.1■■□□□ 1.93
RAB40C-204ENST00000538492 KLHL7Q8IXQ5 586 aa27.1■■□□□ 1.93
RAB40C-204ENST00000538492 TSEN2Q8NCE0 465 aaKnown RBP27.1■■□□□ 1.93
RAB40C-204ENST00000538492 LOXHD1Q8IVV2 1947 aa27.1■■□□□ 1.93
RAB40C-204ENST00000538492 EGFRP00533 1210 aa27.1■■□□□ 1.93
RAB40C-204ENST00000538492 ARHGAP44Q17R89 818 aa27.1■■□□□ 1.93
RAB40C-204ENST00000538492 IFT20Q8IY31 132 aa27.1■■□□□ 1.93
RAB40C-204ENST00000538492 GOLGA6L1Q8N7Z2 621 aa27.1■■□□□ 1.93
RAB40C-204ENST00000538492 NEK9Q8TD19 979 aa27.1■■□□□ 1.93
RAB40C-204ENST00000538492 AFAP1L1Q8TED9 768 aa27.1■■□□□ 1.93
RAB40C-204ENST00000538492 GPR88Q9GZN0 384 aa27.1■■□□□ 1.93
RAB40C-204ENST00000538492 AGO4Q9HCK5 861 aaKnown RBP27.1■■□□□ 1.93
RAB40C-204ENST00000538492 NFU1Q9UMS0 254 aa27.1■■□□□ 1.93
RAB40C-204ENST00000538492 ANXA13P27216 316 aa27.09■■□□□ 1.93
RAB40C-204ENST00000538492 DLG4P78352 724 aa27.09■■□□□ 1.93
RAB40C-204ENST00000538492 MTMR1Q13613 665 aa27.09■■□□□ 1.93
RAB40C-204ENST00000538492 EMBQ6PCB8 327 aa27.09■■□□□ 1.93
RAB40C-204ENST00000538492 GOLGA5Q8TBA6 731 aa27.09■■□□□ 1.93
RAB40C-204ENST00000538492 WDR46O15213 610 aaKnown RBP27.09■■□□□ 1.93
RAB40C-204ENST00000538492 CEP104O60308 925 aa27.09■■□□□ 1.93
RAB40C-204ENST00000538492 GALCP54803 685 aa27.09■■□□□ 1.93
RAB40C-204ENST00000538492 SPP2Q13103 211 aa27.09■■□□□ 1.93
RAB40C-204ENST00000538492 PPP2R5AQ15172 486 aa27.09■■□□□ 1.93
RAB40C-204ENST00000538492 TBC1D10BQ4KMP7 808 aaPredicted RBP27.09■■□□□ 1.93
RAB40C-204ENST00000538492 OLIG1Q8TAK6 271 aa27.09■■□□□ 1.93
RAB40C-204ENST00000538492 LARSQ9P2J5 1176 aaKnown RBP27.09■■□□□ 1.93
RAB40C-204ENST00000538492 APEX2Q9UBZ4 518 aa27.09■■□□□ 1.93
RAB40C-204ENST00000538492 ACTN2P35609 894 aa27.08■■□□□ 1.93
RAB40C-204ENST00000538492 RARRES1P49788 294 aa27.08■■□□□ 1.93
RAB40C-204ENST00000538492 MCF2L2Q86YR7 1114 aa27.08■■□□□ 1.93
RAB40C-204ENST00000538492 SYTL5Q8TDW5 730 aaPredicted RBP27.08■■□□□ 1.93
RAB40C-204ENST00000538492 TAAR1Q96RJ0 339 aa27.08■■□□□ 1.93
RAB40C-204ENST00000538492 GDF3Q9NR23 364 aa27.08■■□□□ 1.93
RAB40C-204ENST00000538492 TNFRSF8P28908 595 aa27.08■■□□□ 1.93
RAB40C-204ENST00000538492 TAF3Q5VWG9 929 aa27.08■■□□□ 1.93
RAB40C-204ENST00000538492 PEX26Q7Z412 305 aa27.08■■□□□ 1.93
RAB40C-204ENST00000538492 DAAM2Q86T65 1068 aa27.08■■□□□ 1.93
RAB40C-204ENST00000538492 UBIAD1Q9Y5Z9 338 aa27.08■■□□□ 1.93
RAB40C-204ENST00000538492 TULP1O00294 542 aaPredicted RBP27.07■■□□□ 1.92
RAB40C-204ENST00000538492 MYCLP12524 364 aaPredicted RBP27.07■■□□□ 1.92
RAB40C-204ENST00000538492 TRADDQ15628 312 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms