RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 PMFBP1Q8TBY8 1022 aa7.88□□□□□ -1.15
CCDC7-208ENST00000537047 ZNF483Q8TF39 744 aaPredicted RBP7.88□□□□□ -1.15
CCDC7-208ENST00000537047 CLIP3Q96DZ5 547 aa7.88□□□□□ -1.15
CCDC7-208ENST00000537047 BOCQ9BWV1 1114 aa7.88□□□□□ -1.15
CCDC7-208ENST00000537047 SAE1Q9UBE0 346 aaPredicted RBP7.88□□□□□ -1.15
CCDC7-208ENST00000537047 DENND2AQ9ULE3 1009 aa7.88□□□□□ -1.15
CCDC7-208ENST00000537047 MAFO75444 373 aaPredicted RBP7.87□□□□□ -1.15
CCDC7-208ENST00000537047 KIF11P52732 1056 aa7.87□□□□□ -1.15
CCDC7-208ENST00000537047 SLC25A3Q00325 362 aa7.87□□□□□ -1.15
CCDC7-208ENST00000537047 PURAQ00577 322 aaKnown RBP7.87□□□□□ -1.15
CCDC7-208ENST00000537047 MAP3K12Q12852 859 aa7.87□□□□□ -1.15
CCDC7-208ENST00000537047 GAREM2Q75VX8 874 aa7.87□□□□□ -1.15
CCDC7-208ENST00000537047 THEMISQ8N1K5 641 aaPredicted RBP7.87□□□□□ -1.15
CCDC7-208ENST00000537047 OR5AN1Q8NGI8 311 aa7.87□□□□□ -1.15
CCDC7-208ENST00000537047 THAP3Q8WTV1 239 aaPredicted RBP7.87□□□□□ -1.15
CCDC7-208ENST00000537047 VWA7Q9Y334 891 aa7.87□□□□□ -1.15
CCDC7-208ENST00000537047 REXO2Q9Y3B8 237 aaKnown RBP7.87□□□□□ -1.15
CCDC7-208ENST00000537047 INHBEP58166 350 aa7.86□□□□□ -1.15
CCDC7-208ENST00000537047 BPIFB4P59827 614 aa7.86□□□□□ -1.15
CCDC7-208ENST00000537047 C2orf27AQ580R0 203 aa7.86□□□□□ -1.15
CCDC7-208ENST00000537047 APPP05067 770 aa7.85□□□□□ -1.15
CCDC7-208ENST00000537047 PTX3P26022 381 aaPredicted RBP7.85□□□□□ -1.15
CCDC7-208ENST00000537047 ZNF460Q14592 562 aa7.85□□□□□ -1.15
CCDC7-208ENST00000537047 NKD2Q969F2 451 aaPredicted RBP7.85□□□□□ -1.15
CCDC7-208ENST00000537047 SLC7A6OSQ96CW6 309 aaPredicted RBP7.85□□□□□ -1.15
CCDC7-208ENST00000537047 C8orf37Q96NL8 207 aa7.85□□□□□ -1.15
CCDC7-208ENST00000537047 SLC6A15Q9H2J7 730 aa7.85□□□□□ -1.15
CCDC7-208ENST00000537047 SAMD15Q9P1V8 674 aa7.85□□□□□ -1.15
CCDC7-208ENST00000537047 A0A087X1B8 175 aa7.84□□□□□ -1.15
CCDC7-208ENST00000537047 UBE2QL1A1L167 161 aa7.84□□□□□ -1.15
CCDC7-208ENST00000537047 TRAF5O00463 557 aa7.84□□□□□ -1.15
CCDC7-208ENST00000537047 H2AFYO75367 372 aaKnown RBP7.84□□□□□ -1.15
CCDC7-208ENST00000537047 NPTXRO95502 500 aa7.84□□□□□ -1.15
CCDC7-208ENST00000537047 ADH4P08319 380 aa7.84□□□□□ -1.15
CCDC7-208ENST00000537047 TCIRG1Q13488 830 aa7.84□□□□□ -1.15
CCDC7-208ENST00000537047 SLFN12LQ6IEE8 588 aa7.84□□□□□ -1.15
CCDC7-208ENST00000537047 ZCCHC8Q6NZY4 707 aaKnown RBP7.84□□□□□ -1.15
CCDC7-208ENST00000537047 Q6ZPA2 131 aa7.84□□□□□ -1.15
CCDC7-208ENST00000537047 GCDHQ92947 438 aaPredicted RBP7.84□□□□□ -1.15
CCDC7-208ENST00000537047 ARMC5Q96C12 935 aa7.84□□□□□ -1.15
CCDC7-208ENST00000537047 MPHOSPH9Q99550 1183 aa7.84□□□□□ -1.15
CCDC7-208ENST00000537047 AURKAIP1Q9NWT8 199 aaPredicted RBP7.84□□□□□ -1.15
CCDC7-208ENST00000537047 RPS6KA4O75676 772 aa7.83□□□□□ -1.16
CCDC7-208ENST00000537047 KRT4P19013 534 aa7.83□□□□□ -1.16
CCDC7-208ENST00000537047 INHBCP55103 352 aa7.83□□□□□ -1.16
CCDC7-208ENST00000537047 ROM1Q03395 351 aa7.83□□□□□ -1.16
CCDC7-208ENST00000537047 KRTAP15-1Q3LI76 137 aa7.83□□□□□ -1.16
CCDC7-208ENST00000537047 MAML3Q96JK9 1138 aa7.83□□□□□ -1.16
CCDC7-208ENST00000537047 PARPBPQ9NWS1 579 aa7.83□□□□□ -1.16
CCDC7-208ENST00000537047 DNAI1Q9UI46 699 aa7.83□□□□□ -1.16
CCDC7-208ENST00000537047 TNPO3Q9Y5L0 923 aaKnown RBP7.83□□□□□ -1.16
CCDC7-208ENST00000537047 PTPDC1A2A3K4 754 aa7.82□□□□□ -1.16
CCDC7-208ENST00000537047 GOLGA8BA8MQT2 603 aa7.82□□□□□ -1.16
CCDC7-208ENST00000537047 DNAJC8O75937 253 aaPredicted RBP7.82□□□□□ -1.16
CCDC7-208ENST00000537047 HNRNPLP14866 589 aaKnown RBP eCLIP7.82□□□□□ -1.16
CCDC7-208ENST00000537047 MAKP20794 623 aa7.82□□□□□ -1.16
CCDC7-208ENST00000537047 TGM1P22735 817 aa7.82□□□□□ -1.16
CCDC7-208ENST00000537047 FNTBP49356 437 aa7.82□□□□□ -1.16
CCDC7-208ENST00000537047 ELAVL1Q15717 326 aaKnown RBP7.82□□□□□ -1.16
CCDC7-208ENST00000537047 DGKDQ16760 1214 aa7.82□□□□□ -1.16
CCDC7-208ENST00000537047 PCSK4Q6UW60 755 aa7.82□□□□□ -1.16
CCDC7-208ENST00000537047 CHST14Q8NCH0 376 aa7.82□□□□□ -1.16
CCDC7-208ENST00000537047 GFM2Q969S9 779 aaKnown RBP7.82□□□□□ -1.16
CCDC7-208ENST00000537047 MKL1Q969V6 931 aa7.82□□□□□ -1.16
CCDC7-208ENST00000537047 GPRC5BQ9NZH0 403 aa7.82□□□□□ -1.16
CCDC7-208ENST00000537047 CCDC163A0A0D9SF12 145 aa7.81□□□□□ -1.16
CCDC7-208ENST00000537047 UBA6A0AVT1 1052 aaPredicted RBP7.81□□□□□ -1.16
CCDC7-208ENST00000537047 PLD2O14939 933 aa7.81□□□□□ -1.16
CCDC7-208ENST00000537047 CYP27B1O15528 508 aa7.81□□□□□ -1.16
CCDC7-208ENST00000537047 MYBPC3Q14896 1274 aa7.81□□□□□ -1.16
CCDC7-208ENST00000537047 PRAMEF9Q5VWM5 478 aa7.81□□□□□ -1.16
CCDC7-208ENST00000537047 FAM111BQ6SJ93 734 aa7.81□□□□□ -1.16
CCDC7-208ENST00000537047 DDX53Q86TM3 631 aaKnown RBP7.81□□□□□ -1.16
CCDC7-208ENST00000537047 ANKRD35Q8N283 1001 aa7.81□□□□□ -1.16
CCDC7-208ENST00000537047 KIAA1958Q8N8K9 716 aa7.81□□□□□ -1.16
CCDC7-208ENST00000537047 LPPQ93052 612 aa7.81□□□□□ -1.16
CCDC7-208ENST00000537047 MIEF2Q96C03 454 aa7.81□□□□□ -1.16
CCDC7-208ENST00000537047 PGBD4Q96DM1 585 aa7.81□□□□□ -1.16
CCDC7-208ENST00000537047 C16orf92Q96LL3 132 aa7.81□□□□□ -1.16
CCDC7-208ENST00000537047 TUBGCP5Q96RT8 1024 aa7.81□□□□□ -1.16
CCDC7-208ENST00000537047 AGAP2Q99490 1192 aa7.81□□□□□ -1.16
CCDC7-208ENST00000537047 KANSL2Q9H9L4 492 aa7.81□□□□□ -1.16
CCDC7-208ENST00000537047 FAM20BO75063 409 aa7.8□□□□□ -1.16
CCDC7-208ENST00000537047 TOX4O94842 621 aa7.8□□□□□ -1.16
CCDC7-208ENST00000537047 SLC9A1P19634 815 aa7.8□□□□□ -1.16
CCDC7-208ENST00000537047 ARHGAP44Q17R89 818 aa7.8□□□□□ -1.16
CCDC7-208ENST00000537047 CLEC14AQ86T13 490 aa7.8□□□□□ -1.16
CCDC7-208ENST00000537047 ELOA2Q8IYF1 753 aaPredicted RBP7.8□□□□□ -1.16
CCDC7-208ENST00000537047 DYDC2Q96IM9 177 aa7.8□□□□□ -1.16
CCDC7-208ENST00000537047 IL23AQ9NPF7 189 aa7.8□□□□□ -1.16
CCDC7-208ENST00000537047 SDSP20132 328 aa7.79□□□□□ -1.16
CCDC7-208ENST00000537047 IGFALSP35858 605 aa7.79□□□□□ -1.16
CCDC7-208ENST00000537047 SESN2P58004 480 aaPredicted RBP7.79□□□□□ -1.16
CCDC7-208ENST00000537047 SQSTM1Q13501 440 aa7.79□□□□□ -1.16
CCDC7-208ENST00000537047 CNGB1Q14028 1251 aaPredicted RBP7.79□□□□□ -1.16
CCDC7-208ENST00000537047 TOB2Q14106 344 aaPredicted RBP7.79□□□□□ -1.16
CCDC7-208ENST00000537047 TTC38Q5R3I4 469 aa7.79□□□□□ -1.16
CCDC7-208ENST00000537047 PIK3R6Q5UE93 754 aa7.79□□□□□ -1.16
CCDC7-208ENST00000537047 ESRP1Q6NXG1 681 aaKnown RBP7.79□□□□□ -1.16
CCDC7-208ENST00000537047 ZNF575Q86XF7 245 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms