RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 CXCL10P02778 98 aa13.41□□□□□ -0.26
CHD4-203ENST00000535717 CYP11B2P19099 503 aa13.41□□□□□ -0.26
CHD4-203ENST00000535717 GPC3P51654 580 aa13.41□□□□□ -0.26
CHD4-203ENST00000535717 SLC12A3P55017 1021 aa13.41□□□□□ -0.26
CHD4-203ENST00000535717 NLRP11P59045 1033 aaKnown RBP13.41□□□□□ -0.26
CHD4-203ENST00000535717 LPIN1Q14693 890 aa13.41□□□□□ -0.26
CHD4-203ENST00000535717 PRPF38BQ5VTL8 546 aaKnown RBP13.41□□□□□ -0.26
CHD4-203ENST00000535717 RRAGBQ5VZM2 374 aa13.41□□□□□ -0.26
CHD4-203ENST00000535717 RESP18Q5W5W9 173 aa13.41□□□□□ -0.26
CHD4-203ENST00000535717 MAEAQ7L5Y9 396 aa13.41□□□□□ -0.26
CHD4-203ENST00000535717 KSR1Q8IVT5 923 aa13.41□□□□□ -0.26
CHD4-203ENST00000535717 RPUSD2Q8IZ73 545 aaKnown RBP13.41□□□□□ -0.26
CHD4-203ENST00000535717 SYT2Q8N9I0 419 aaPredicted RBP13.41□□□□□ -0.26
CHD4-203ENST00000535717 TET1Q8NFU7 2136 aa13.41□□□□□ -0.26
CHD4-203ENST00000535717 PSPC1Q8WXF1 523 aaKnown RBP13.41□□□□□ -0.26
CHD4-203ENST00000535717 ZNF668Q96K58 619 aaPredicted RBP13.41□□□□□ -0.26
CHD4-203ENST00000535717 RUSC1Q9BVN2 902 aa13.41□□□□□ -0.26
CHD4-203ENST00000535717 UBE2OQ9C0C9 1292 aaKnown RBP13.41□□□□□ -0.26
CHD4-203ENST00000535717 ADAMTS10Q9H324 1103 aa13.41□□□□□ -0.26
CHD4-203ENST00000535717 PRO3102Q9H379 93 aa13.41□□□□□ -0.26
CHD4-203ENST00000535717 GPRC5CQ9NQ84 441 aa13.41□□□□□ -0.26
CHD4-203ENST00000535717 GINS2Q9Y248 185 aa13.41□□□□□ -0.26
CHD4-203ENST00000535717 LAMA2P24043 3122 aaKnown RBP13.41□□□□□ -0.26
CHD4-203ENST00000535717 SSBP05455 408 aaKnown RBP eCLIP13.4□□□□□ -0.26
CHD4-203ENST00000535717 GHRP10912 638 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 BMP8BP34820 402 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 ARL2P36404 184 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 CRYBB1P53674 252 aaPredicted RBP13.4□□□□□ -0.26
CHD4-203ENST00000535717 LAMTOR4Q0VGL1 99 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 MCM6Q14566 821 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 TCTN1Q2MV58 587 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 NAALADL2Q58DX5 795 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 FBXO47Q5MNV8 452 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 TMEM240Q5SV17 173 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 ADALQ6DHV7 355 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 RINT1Q6NUQ1 792 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 CHRDL2Q6WN34 429 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 CCDC73Q6ZRK6 1079 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 C1orf186Q6ZWK4 172 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 RHPN2Q8IUC4 686 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 ZNF710Q8N1W2 664 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 PDILTQ8N807 584 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 MCPH1Q8NEM0 835 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 ASAP3Q8TDY4 903 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 TMEM40Q8WWA1 233 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 TCP11Q8WWU5 503 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 RAD54LQ92698 747 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 OSMRQ99650 979 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 POLR3FQ9H1D9 316 aaPredicted RBP13.4□□□□□ -0.26
CHD4-203ENST00000535717 POLD4Q9HCU8 107 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 COL4A3BPQ9Y5P4 624 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 LOXHD1Q8IVV2 1947 aa13.4□□□□□ -0.26
CHD4-203ENST00000535717 PFKMP08237 780 aa13.39□□□□□ -0.27
CHD4-203ENST00000535717 CMA1P23946 247 aa13.39□□□□□ -0.27
CHD4-203ENST00000535717 CDC42EP1Q00587 391 aa13.39□□□□□ -0.27
CHD4-203ENST00000535717 DHX8Q14562 1220 aaKnown RBP13.39□□□□□ -0.27
CHD4-203ENST00000535717 PLEKHG4Q58EX7 1191 aa13.39□□□□□ -0.27
CHD4-203ENST00000535717 ARSHQ5FYA8 562 aa13.39□□□□□ -0.27
CHD4-203ENST00000535717 FAM102BQ5T8I3 360 aa13.39□□□□□ -0.27
CHD4-203ENST00000535717 ZNF365Q70YC5 407 aa13.39□□□□□ -0.27
CHD4-203ENST00000535717 NLRP7Q8WX94 980 aa13.39□□□□□ -0.27
CHD4-203ENST00000535717 LARP4BQ92615 738 aaKnown RBP13.39□□□□□ -0.27
CHD4-203ENST00000535717 NLRP4Q96MN2 994 aa13.39□□□□□ -0.27
CHD4-203ENST00000535717 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.39□□□□□ -0.271e-10■■□□□ 12.6
CHD4-203ENST00000535717 AGO3Q9H9G7 860 aaKnown RBP13.39□□□□□ -0.27
CHD4-203ENST00000535717 FAM13BQ9NYF5 915 aa13.39□□□□□ -0.27
CHD4-203ENST00000535717 STK17AQ9UEE5 414 aa13.39□□□□□ -0.27
CHD4-203ENST00000535717 SQORQ9Y6N5 450 aa13.39□□□□□ -0.27
CHD4-203ENST00000535717 A0A087WZ62 844 aa13.38□□□□□ -0.27
CHD4-203ENST00000535717 NPHP3-ACAD11A0A0J9YXS1 232 aa13.38□□□□□ -0.27
CHD4-203ENST00000535717 ASAP2O43150 1006 aa13.38□□□□□ -0.27
CHD4-203ENST00000535717 FGBP02675 491 aa13.38□□□□□ -0.27
CHD4-203ENST00000535717 SRGAP2CP0DJJ0 459 aa13.38□□□□□ -0.27
CHD4-203ENST00000535717 DARSP14868 501 aaKnown RBP13.38□□□□□ -0.27
CHD4-203ENST00000535717 GLRA2P23416 452 aa13.38□□□□□ -0.27
CHD4-203ENST00000535717 GUCY2CP25092 1073 aa13.38□□□□□ -0.27
CHD4-203ENST00000535717 CD52P31358 61 aa13.38□□□□□ -0.27
CHD4-203ENST00000535717 STAT6P42226 847 aa13.38□□□□□ -0.27
CHD4-203ENST00000535717 MXD4Q14582 209 aaPredicted RBP13.38□□□□□ -0.27
CHD4-203ENST00000535717 SHHQ15465 462 aa13.38□□□□□ -0.27
CHD4-203ENST00000535717 E2F4Q16254 413 aa13.38□□□□□ -0.27
CHD4-203ENST00000535717 TPRNQ4KMQ1 711 aa13.38□□□□□ -0.27
CHD4-203ENST00000535717 C9orf50Q5SZB4 431 aa13.38□□□□□ -0.27
CHD4-203ENST00000535717 PSRC1Q6PGN9 363 aaPredicted RBP13.38□□□□□ -0.27
CHD4-203ENST00000535717 PPP4R3CPQ6ZMV5 832 aa13.38□□□□□ -0.27
CHD4-203ENST00000535717 TSHZ1Q6ZSZ6 1077 aa13.38□□□□□ -0.27
CHD4-203ENST00000535717 ZNF410Q86VK4 478 aa13.38□□□□□ -0.27
CHD4-203ENST00000535717 GPBP1Q86WP2 473 aa13.38□□□□□ -0.27
CHD4-203ENST00000535717 DAW1Q8N136 415 aa13.38□□□□□ -0.27
CHD4-203ENST00000535717 USP38Q8NB14 1042 aa13.38□□□□□ -0.27
CHD4-203ENST00000535717 DBF4BQ8NFT6 615 aa13.38□□□□□ -0.27
CHD4-203ENST00000535717 SCLT1Q96NL6 688 aa13.38□□□□□ -0.27
CHD4-203ENST00000535717 FDXACB1Q9BRP7 624 aaPredicted RBP13.38□□□□□ -0.27
CHD4-203ENST00000535717 IFIH1Q9BYX4 1025 aaKnown RBP13.38□□□□□ -0.27
CHD4-203ENST00000535717 NOC2LQ9Y3T9 749 aaKnown RBP13.38□□□□□ -0.27
CHD4-203ENST00000535717 A0A1B0GVL5 298 aa13.37□□□□□ -0.27
CHD4-203ENST00000535717 A0A1W2PQ27 194 aa13.37□□□□□ -0.27
CHD4-203ENST00000535717 A0A1W2PQ64 194 aa13.37□□□□□ -0.27
CHD4-203ENST00000535717 A0A1W2PQD8 194 aa13.37□□□□□ -0.27
CHD4-203ENST00000535717 POLR2DO15514 142 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms