RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 FAM53CQ9NYF3 392 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 DTLQ9NZJ0 730 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 PRSS50Q9UI38 385 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 LIMCH1Q9UPQ0 1083 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 INVSQ9Y283 1065 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 A0A0A6YYJ9 748 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 A0A0A6YYK5 440 aaPredicted RBP4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 UBA6A0AVT1 1052 aaPredicted RBP4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 PRAMEF25A6NGN4 478 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 KRTAP9-7A8MTY7 169 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 F8W031 263 aaPredicted RBP4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 ZBTB7AO95365 584 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 IL33O95760 270 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 PDCP20941 246 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 AFMP43652 599 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 MAPKAPK2P49137 400 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 ZNF280AP59817 542 aaPredicted RBP4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 PPP3CAQ08209 521 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 SLC9A5Q14940 896 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 RTP5Q14D33 572 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 ANO4Q32M45 955 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 TTC38Q5R3I4 469 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 KANK2Q63ZY3 851 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 KSR2Q6VAB6 950 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 PRR23BQ6ZRT6 265 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 BHLHE22Q8NFJ8 381 aaPredicted RBP4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 RAX2Q96IS3 184 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 SYT3Q9BQG1 590 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 SOX7Q9BT81 388 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 LRFN3Q9BTN0 628 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 AP5M1Q9H0R1 490 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 C1orf112Q9NSG2 853 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 UCKL1Q9NWZ5 548 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 DPP7Q9UHL4 492 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 GPR160Q9UJ42 338 aa4.49□□□□□ -1.69
HMGN1P28-201ENST00000521340 MYPNQ86TC9 1320 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 A0A1W2PQ27 194 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 A0A1W2PQ64 194 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 A0A1W2PQC6 194 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 A0A1W2PQD8 194 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 HTRA2O43464 458 aaPredicted RBP4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 TUSC2O75896 110 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 IL18BPO95998 194 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 KRT1P04264 644 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 PHKG2P15735 406 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 RHCEP18577 417 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 PTGS1P23219 599 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 CFPP27918 469 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 SERPINB3P29508 390 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 LGALS4P56470 323 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 PFKPQ01813 784 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 SLC6A3Q01959 620 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 RHDQ02161 417 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 DSC2Q02487 901 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 ADCY2Q08462 1091 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 NOLC1Q14978 699 aaKnown RBP eCLIP4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 NR1I3Q14994 352 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 ACAP2Q15057 778 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 VPS72Q15906 364 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 PLEKHN1Q494U1 663 aaPredicted RBP4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 IL31Q6EBC2 164 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 SLC4A10Q6U841 1118 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 USP45Q70EL2 814 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 C1QL4Q86Z23 238 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 AMOTL1Q8IY63 956 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 EXOC8Q8IYI6 725 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 KIAA0319LQ8IZA0 1049 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 THEMISQ8N1K5 641 aaPredicted RBP4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 FAM26EQ8N5C1 309 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 DTX3Q8N9I9 347 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 PPP1R35Q8TAP8 253 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 RSAD2Q8WXG1 361 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 CPA5Q8WXQ8 436 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 SYTL4Q96C24 671 aaPredicted RBP4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 LRGUKQ96M69 825 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 STRBPQ96SI9 672 aaKnown RBP4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 FDXACB1Q9BRP7 624 aaPredicted RBP4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 NAA15Q9BXJ9 866 aaKnown RBP4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 PCGF6Q9BYE7 350 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 IFT122Q9HBG6 1241 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 SLC39A2Q9NP94 309 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 NMRK2Q9NPI5 230 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 GALNT8Q9NY28 637 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 EVLQ9UI08 416 aaPredicted RBP4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 CDY2AQ9Y6F7 541 aa4.48□□□□□ -1.69
HMGN1P28-201ENST00000521340 FRMPD2Q68DX3 1309 aaPredicted RBP4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 H3BML4 177 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 CTNND1O60716 968 aaKnown RBP4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 OPHN1O60890 802 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 SEC24DO94855 1032 aaPredicted RBP4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 GLI1P08151 1106 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 CT47B1P0C2W7 299 aaPredicted RBP4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 HSPA6P17066 643 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 HTR3AP46098 478 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 ANTXR2P58335 489 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 CLUL1Q15846 466 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 ADRM1Q16186 407 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 ARHGAP29Q52LW3 1261 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 IFIT1BQ5T764 474 aaKnown RBP4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 MBNL2Q5VZF2 373 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms