RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 SETD4Q9NVD3 440 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 KBTBD4Q9NVX7 518 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 HDAC6Q9UBN7 1215 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 BDP1A6H8Y1 2624 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 MROH7Q68CQ1 1323 aa11.27□□□□□ -0.61
NEDD9-214ENST00000513989 A0A087X0B3 334 aa11.26□□□□□ -0.61
NEDD9-214ENST00000513989 ACTN4O43707 911 aaKnown RBP11.26□□□□□ -0.61
NEDD9-214ENST00000513989 AFMP43652 599 aa11.26□□□□□ -0.61
NEDD9-214ENST00000513989 TARBP2Q15633 366 aaKnown RBP11.26□□□□□ -0.61
NEDD9-214ENST00000513989 NAALADL2Q58DX5 795 aa11.26□□□□□ -0.61
NEDD9-214ENST00000513989 FAM102BQ5T8I3 360 aa11.26□□□□□ -0.61
NEDD9-214ENST00000513989 IER5Q5VY09 327 aa11.26□□□□□ -0.61
NEDD9-214ENST00000513989 PLA2G4FQ68DD2 849 aa11.26□□□□□ -0.61
NEDD9-214ENST00000513989 RINT1Q6NUQ1 792 aa11.26□□□□□ -0.61
NEDD9-214ENST00000513989 TAF2Q6P1X5 1199 aa11.26□□□□□ -0.61
NEDD9-214ENST00000513989 MTHFD1LQ6UB35 978 aa11.26□□□□□ -0.61
NEDD9-214ENST00000513989 NME8Q8N427 588 aa11.26□□□□□ -0.61
NEDD9-214ENST00000513989 KIFAP3Q92845 792 aa11.26□□□□□ -0.61
NEDD9-214ENST00000513989 IFT74Q96LB3 600 aa11.26□□□□□ -0.61
NEDD9-214ENST00000513989 DRC1Q96MC2 740 aa11.26□□□□□ -0.61
NEDD9-214ENST00000513989 MTRQ99707 1265 aa11.26□□□□□ -0.61
NEDD9-214ENST00000513989 C7orf25Q9BPX7 421 aa11.26□□□□□ -0.61
NEDD9-214ENST00000513989 GTPBP4Q9BZE4 634 aaKnown RBP11.26□□□□□ -0.61
NEDD9-214ENST00000513989 PCDHA2Q9Y5H9 948 aa11.26□□□□□ -0.61
NEDD9-214ENST00000513989 KIAA1217Q5T5P2 1943 aa11.26□□□□□ -0.61
NEDD9-214ENST00000513989 TRIP12Q14669 1992 aaPredicted RBP11.26□□□□□ -0.61
NEDD9-214ENST00000513989 SCN10AQ9Y5Y9 1956 aa11.26□□□□□ -0.61
NEDD9-214ENST00000513989 DCDC2CA8MYV0 355 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 TLR3O15455 904 aaKnown RBP11.25□□□□□ -0.61
NEDD9-214ENST00000513989 ASAP2O43150 1006 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 GTPBP6O43824 516 aaPredicted RBP11.25□□□□□ -0.61
NEDD9-214ENST00000513989 USO1O60763 962 aaKnown RBP11.25□□□□□ -0.61
NEDD9-214ENST00000513989 TBCAO75347 108 aaKnown RBP11.25□□□□□ -0.61
NEDD9-214ENST00000513989 LETM1O95202 739 aaPredicted RBP11.25□□□□□ -0.61
NEDD9-214ENST00000513989 GUCY2CP25092 1073 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 CDK7P50613 346 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 SMTNP53814 917 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 MXD4Q14582 209 aaPredicted RBP11.25□□□□□ -0.61
NEDD9-214ENST00000513989 PTGISQ16647 500 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 KLHL40Q2TBA0 621 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 ZNF697Q5TEC3 545 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 EFCAB12Q6NXP0 572 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 C1orf186Q6ZWK4 172 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 KCNK18Q7Z418 384 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 CCDC65Q8IXS2 484 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 SLC43A3Q8NBI5 491 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 TET1Q8NFU7 2136 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 DDX12PQ92771 950 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 TOX2Q96NM4 488 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 MAP7D2Q96T17 732 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 CDX2Q99626 313 aaPredicted RBP11.25□□□□□ -0.61
NEDD9-214ENST00000513989 SEMA6BQ9H3T3 888 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 DHX33Q9H6R0 707 aaKnown RBP11.25□□□□□ -0.61
NEDD9-214ENST00000513989 C17orf75Q9HAS0 396 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 RMND1Q9NWS8 449 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 GTF2IRD1Q9UHL9 959 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 TUBE1Q9UJT0 475 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 TBX21Q9UL17 535 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 ODF2LQ9ULJ1 636 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 COL4A3BPQ9Y5P4 624 aa11.25□□□□□ -0.61
NEDD9-214ENST00000513989 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.24□□□□□ -0.61
NEDD9-214ENST00000513989 SMIM35A0A1B0GVV1 85 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 PVALEFA0A1B0GWK0 134 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 MBLAC1A4D2B0 266 aaPredicted RBP11.24□□□□□ -0.61
NEDD9-214ENST00000513989 TMEM150BA6NC51 233 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 M0QZ92 97 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 TRAK2O60296 914 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 FAM13AO94988 1023 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 CYP2C9P11712 490 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 GAP43P17677 238 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 SCP2P22307 547 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 ABCD1P33897 745 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 ASIC1P78348 528 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 SMAD3P84022 425 aaKnown RBP11.24□□□□□ -0.61
NEDD9-214ENST00000513989 TFDP1Q14186 410 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 EMC2Q15006 297 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 POSTNQ15063 836 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 PPP2R5AQ15172 486 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 CNNM4Q6P4Q7 775 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 C16orf59Q7L2K0 433 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 MAEAQ7L5Y9 396 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 DYMQ7RTS9 669 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 GPT2Q8TD30 523 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 LMBR1Q8WVP7 490 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 PSPC1Q8WXF1 523 aaKnown RBP11.24□□□□□ -0.61
NEDD9-214ENST00000513989 STAMQ92783 540 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 SMARCE1Q969G3 411 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 SH2D3AQ9BRG2 576 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 ANP32EQ9BTT0 268 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 NUP62CLQ9H1M0 184 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 ZHX3Q9H4I2 956 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 LARSQ9P2J5 1176 aaKnown RBP11.24□□□□□ -0.61
NEDD9-214ENST00000513989 SUCLA2Q9P2R7 463 aaPredicted RBP11.24□□□□□ -0.61
NEDD9-214ENST00000513989 PTPRSQ13332 1948 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 XIRP2A4UGR9 3374 aa11.24□□□□□ -0.61
NEDD9-214ENST00000513989 TANC1Q9C0D5 1861 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 IGKV6-21A0A0C4DH24 114 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 MYMKA6NI61 221 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 ZBTB42B2RXF5 422 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 H0YCG3 227 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 198.6 ms