RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 TM4SF5O14894 197 aa12.46□□□□□ -0.41
SNF8-207ENST00000509995 DHX16O60231 1041 aaKnown RBP12.46□□□□□ -0.41
SNF8-207ENST00000509995 FOXD2O60548 495 aaPredicted RBP12.46□□□□□ -0.41
SNF8-207ENST00000509995 INSRRP14616 1297 aa12.46□□□□□ -0.41
SNF8-207ENST00000509995 CLCN4P51793 760 aa12.46□□□□□ -0.41
SNF8-207ENST00000509995 LIMK1P53667 647 aa12.46□□□□□ -0.41
SNF8-207ENST00000509995 SNW1Q13573 536 aaKnown RBP12.46□□□□□ -0.41
SNF8-207ENST00000509995 HTR4Q13639 388 aa12.46□□□□□ -0.41
SNF8-207ENST00000509995 WTAPQ15007 396 aa12.46□□□□□ -0.41
SNF8-207ENST00000509995 ODR4Q5SWX8 454 aa12.46□□□□□ -0.41
SNF8-207ENST00000509995 SAMD3Q8N6K7 520 aa12.46□□□□□ -0.41
SNF8-207ENST00000509995 CMASQ8NFW8 434 aaPredicted RBP12.46□□□□□ -0.41
SNF8-207ENST00000509995 BBXQ8WY36 941 aaPredicted RBP12.46□□□□□ -0.41
SNF8-207ENST00000509995 MAP4K1Q92918 833 aa12.46□□□□□ -0.41
SNF8-207ENST00000509995 TMEM121BQ9BXQ6 578 aaPredicted RBP12.46□□□□□ -0.41
SNF8-207ENST00000509995 JMJD4Q9H9V9 463 aa12.46□□□□□ -0.41
SNF8-207ENST00000509995 ECHDC1Q9NTX5 307 aa12.46□□□□□ -0.41
SNF8-207ENST00000509995 ST3GAL5Q9UNP4 418 aa12.46□□□□□ -0.41
SNF8-207ENST00000509995 GINS2Q9Y248 185 aa12.46□□□□□ -0.41
SNF8-207ENST00000509995 NUMBLQ9Y6R0 609 aa12.46□□□□□ -0.41
SNF8-207ENST00000509995 EVPLQ92817 2033 aa12.45□□□□□ -0.42
SNF8-207ENST00000509995 SMIM35A0A1B0GVV1 85 aa12.45□□□□□ -0.42
SNF8-207ENST00000509995 FAM170BA6NMN3 283 aa12.45□□□□□ -0.42
SNF8-207ENST00000509995 ANHXE9PGG2 379 aa12.45□□□□□ -0.42
SNF8-207ENST00000509995 HMMRO75330 724 aa12.45□□□□□ -0.42
SNF8-207ENST00000509995 ALDH7A1P49419 539 aaKnown RBP12.45□□□□□ -0.42
SNF8-207ENST00000509995 POLGP54098 1239 aaPredicted RBP12.45□□□□□ -0.42
SNF8-207ENST00000509995 BCAR1P56945 870 aa12.45□□□□□ -0.42
SNF8-207ENST00000509995 PRKCQQ04759 706 aa12.45□□□□□ -0.42
SNF8-207ENST00000509995 MLF2Q15773 248 aaPredicted RBP12.45□□□□□ -0.42
SNF8-207ENST00000509995 ASPRV1Q53RT3 343 aa12.45□□□□□ -0.42
SNF8-207ENST00000509995 FCHSD1Q86WN1 690 aa12.45□□□□□ -0.42
SNF8-207ENST00000509995 TMEM173Q86WV6 379 aaPredicted RBP12.45□□□□□ -0.42
SNF8-207ENST00000509995 NME8Q8N427 588 aa12.45□□□□□ -0.42
SNF8-207ENST00000509995 CELF5Q8N6W0 485 aaKnown RBP12.45□□□□□ -0.42
SNF8-207ENST00000509995 MYL10Q9BUA6 226 aa12.45□□□□□ -0.42
SNF8-207ENST00000509995 SMARCAD1Q9H4L7 1026 aa12.45□□□□□ -0.42
SNF8-207ENST00000509995 LTB4R2Q9NPC1 389 aa12.45□□□□□ -0.42
SNF8-207ENST00000509995 IGSF10Q6WRI0 2623 aa12.44□□□□□ -0.42
SNF8-207ENST00000509995 GSTTP1A0A1W2PQM5 241 aa12.44□□□□□ -0.42
SNF8-207ENST00000509995 GPR182O15218 404 aa12.44□□□□□ -0.42
SNF8-207ENST00000509995 TDGF1P13385 188 aa12.44□□□□□ -0.42
SNF8-207ENST00000509995 LAMP2P13473 410 aa12.44□□□□□ -0.42
SNF8-207ENST00000509995 DSC3Q14574 896 aa12.44□□□□□ -0.42
SNF8-207ENST00000509995 CLLU1OSQ5K130 101 aa12.44□□□□□ -0.42
SNF8-207ENST00000509995 ZMYM1Q5SVZ6 1142 aa12.44□□□□□ -0.42
SNF8-207ENST00000509995 PRR23BQ6ZRT6 265 aa12.44□□□□□ -0.42
SNF8-207ENST00000509995 SIRT2Q8IXJ6 389 aa12.44□□□□□ -0.42
SNF8-207ENST00000509995 GIMAP8Q8ND71 665 aaPredicted RBP12.44□□□□□ -0.42
SNF8-207ENST00000509995 TRAPPC12Q8WVT3 735 aa12.44□□□□□ -0.42
SNF8-207ENST00000509995 CLDN23Q96B33 292 aa12.44□□□□□ -0.42
SNF8-207ENST00000509995 RHOBTB2Q9BYZ6 727 aa12.44□□□□□ -0.42
SNF8-207ENST00000509995 CDHR5Q9HBB8 845 aa12.44□□□□□ -0.42
SNF8-207ENST00000509995 VAT1LQ9HCJ6 419 aa12.44□□□□□ -0.42
SNF8-207ENST00000509995 RTEL1Q9NZ71 1219 aa12.44□□□□□ -0.42
SNF8-207ENST00000509995 GCOM1H8Y6P7 765 aaPredicted RBP12.43□□□□□ -0.42
SNF8-207ENST00000509995 PPP1R11O60927 126 aaPredicted RBP12.43□□□□□ -0.42
SNF8-207ENST00000509995 POLR2MP0CAP2 368 aa12.43□□□□□ -0.42
SNF8-207ENST00000509995 RPS9P46781 194 aaKnown RBP12.43□□□□□ -0.42
SNF8-207ENST00000509995 GPC5P78333 572 aa12.43□□□□□ -0.42
SNF8-207ENST00000509995 ZBTB41Q5SVQ8 909 aa12.43□□□□□ -0.42
SNF8-207ENST00000509995 RSPO2Q6UXX9 243 aaPredicted RBP12.43□□□□□ -0.42
SNF8-207ENST00000509995 CYP26C1Q6V0L0 522 aa12.43□□□□□ -0.42
SNF8-207ENST00000509995 DDX53Q86TM3 631 aaKnown RBP12.43□□□□□ -0.42
SNF8-207ENST00000509995 FAM228AQ86W67 206 aa12.43□□□□□ -0.42
SNF8-207ENST00000509995 PNMA1Q8ND90 353 aa12.43□□□□□ -0.42
SNF8-207ENST00000509995 ST13P5Q8NFI4 369 aaPredicted RBP12.43□□□□□ -0.42
SNF8-207ENST00000509995 SEPT1Q8WYJ6 367 aa12.43□□□□□ -0.42
SNF8-207ENST00000509995 ADAM33Q9BZ11 813 aa12.43□□□□□ -0.42
SNF8-207ENST00000509995 MAN1C1Q9NR34 630 aa12.43□□□□□ -0.42
SNF8-207ENST00000509995 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.43□□□□□ -0.42
SNF8-207ENST00000509995 ADAMTS20P59510 1910 aa12.43□□□□□ -0.42
SNF8-207ENST00000509995 CELSR3Q9NYQ7 3312 aa12.42□□□□□ -0.42
SNF8-207ENST00000509995 DOCK6Q96HP0 2047 aa12.42□□□□□ -0.42
SNF8-207ENST00000509995 CCDC195A0A1B0GUA6 201 aa12.42□□□□□ -0.42
SNF8-207ENST00000509995 KCNK5O95279 499 aa12.42□□□□□ -0.42
SNF8-207ENST00000509995 CD72P21854 359 aa12.42□□□□□ -0.42
SNF8-207ENST00000509995 TARSP26639 723 aaKnown RBP12.42□□□□□ -0.42
SNF8-207ENST00000509995 KLRC2P26717 231 aa12.42□□□□□ -0.42
SNF8-207ENST00000509995 NRLP54845 237 aa12.42□□□□□ -0.42
SNF8-207ENST00000509995 PLCB4Q15147 1175 aa12.42□□□□□ -0.42
SNF8-207ENST00000509995 AASDHQ4L235 1098 aaPredicted RBP12.42□□□□□ -0.42
SNF8-207ENST00000509995 VPS53Q5VIR6 699 aa12.42□□□□□ -0.42
SNF8-207ENST00000509995 TSHZ3Q63HK5 1081 aa12.42□□□□□ -0.42
SNF8-207ENST00000509995 GET4Q7L5D6 327 aaPredicted RBP12.42□□□□□ -0.42
SNF8-207ENST00000509995 ZCCHC14Q8WYQ9 949 aaKnown RBP12.42□□□□□ -0.42
SNF8-207ENST00000509995 KLHL5Q96PQ7 755 aa12.42□□□□□ -0.42
SNF8-207ENST00000509995 EMILIN2Q9BXX0 1053 aa12.42□□□□□ -0.42
SNF8-207ENST00000509995 MRPL9Q9BYD2 267 aaKnown RBP12.42□□□□□ -0.42
SNF8-207ENST00000509995 MTCL1Q9Y4B5 1905 aaKnown RBP12.41□□□□□ -0.42
SNF8-207ENST00000509995 SDK1Q7Z5N4 2213 aa12.41□□□□□ -0.42
SNF8-207ENST00000509995 INPPL1O15357 1258 aa12.41□□□□□ -0.42
SNF8-207ENST00000509995 ZC3H11AO75152 810 aaKnown RBP eCLIP12.41□□□□□ -0.42
SNF8-207ENST00000509995 CNPP09543 421 aaKnown RBP12.41□□□□□ -0.42
SNF8-207ENST00000509995 KCNA2P16389 499 aa12.41□□□□□ -0.42
SNF8-207ENST00000509995 NCLP19338 710 aaKnown RBP12.41□□□□□ -0.42
SNF8-207ENST00000509995 RBM25P49756 843 aaKnown RBP12.41□□□□□ -0.42
SNF8-207ENST00000509995 MTAPQ13126 283 aa12.41□□□□□ -0.42
SNF8-207ENST00000509995 SLC44A4Q53GD3 710 aa12.41□□□□□ -0.42
SNF8-207ENST00000509995 SOWAHCQ53LP3 525 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms