RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 FAM86B1E9PN63 330 aa18.48■□□□□ 0.55
LIN54-204ENST00000505397 SLC16A3O15427 465 aaKnown RBP18.48■□□□□ 0.55
LIN54-204ENST00000505397 AKAP3O75969 853 aa18.48■□□□□ 0.55
LIN54-204ENST00000505397 KIF4AO95239 1232 aa18.48■□□□□ 0.55
LIN54-204ENST00000505397 ICAM1P05362 532 aa18.48■□□□□ 0.55
LIN54-204ENST00000505397 FAM86B2P0C5J1 330 aa18.48■□□□□ 0.55
LIN54-204ENST00000505397 CIITAP33076 1130 aa18.48■□□□□ 0.55
LIN54-204ENST00000505397 PABPC4Q13310 644 aaKnown RBP eCLIP18.48■□□□□ 0.55
LIN54-204ENST00000505397 ACTRT1Q8TDG2 376 aa18.48■□□□□ 0.55
LIN54-204ENST00000505397 PBKQ96KB5 322 aa18.48■□□□□ 0.55
LIN54-204ENST00000505397 CCDC43Q96MW1 224 aaKnown RBP18.48■□□□□ 0.55
LIN54-204ENST00000505397 TYW1Q9NV66 732 aaKnown RBP18.48■□□□□ 0.55
LIN54-204ENST00000505397 PPP2R3BQ9Y5P8 575 aa18.48■□□□□ 0.55
LIN54-204ENST00000505397 ASTN1O14525 1302 aa18.47■□□□□ 0.55
LIN54-204ENST00000505397 RAD51CO43502 376 aa18.47■□□□□ 0.55
LIN54-204ENST00000505397 TNNC1P63316 161 aa18.47■□□□□ 0.55
LIN54-204ENST00000505397 RPS6KA1Q15418 735 aa18.47■□□□□ 0.55
LIN54-204ENST00000505397 VAV3Q9UKW4 847 aa18.47■□□□□ 0.55
LIN54-204ENST00000505397 CTDP1Q9Y5B0 961 aaPredicted RBP18.47■□□□□ 0.55
LIN54-204ENST00000505397 MEIS1O00470 390 aa18.47■□□□□ 0.55
LIN54-204ENST00000505397 CYP3A4P08684 503 aa18.47■□□□□ 0.55
LIN54-204ENST00000505397 XRCC5P13010 732 aaKnown RBP18.47■□□□□ 0.55
LIN54-204ENST00000505397 GNGT1P63211 74 aa18.47■□□□□ 0.55
LIN54-204ENST00000505397 ENOX2Q16206 610 aaKnown RBP18.47■□□□□ 0.55
LIN54-204ENST00000505397 CFAP58Q5T655 872 aa18.47■□□□□ 0.55
LIN54-204ENST00000505397 PRAMEF18Q5VWM3 479 aa18.47■□□□□ 0.55
LIN54-204ENST00000505397 IFT81Q8WYA0 676 aa18.47■□□□□ 0.55
LIN54-204ENST00000505397 SPAG5Q96R06 1193 aa18.47■□□□□ 0.55
LIN54-204ENST00000505397 METTL14Q9HCE5 456 aaKnown RBP18.47■□□□□ 0.55
LIN54-204ENST00000505397 FLOT1O75955 427 aa18.46■□□□□ 0.55
LIN54-204ENST00000505397 KRT14P02533 472 aa18.46■□□□□ 0.55
LIN54-204ENST00000505397 DNA2P51530 1060 aa18.46■□□□□ 0.55
LIN54-204ENST00000505397 IFI16Q16666 785 aaKnown RBP18.46■□□□□ 0.55
LIN54-204ENST00000505397 SLC35C1Q96A29 364 aa18.46■□□□□ 0.55
LIN54-204ENST00000505397 GTPBP10A4D1E9 387 aaKnown RBP18.46■□□□□ 0.55
LIN54-204ENST00000505397 VCAM1P19320 739 aa18.46■□□□□ 0.55
LIN54-204ENST00000505397 SPP2Q13103 211 aa18.46■□□□□ 0.55
LIN54-204ENST00000505397 TRADDQ15628 312 aa18.46■□□□□ 0.55
LIN54-204ENST00000505397 ALKBH5Q6P6C2 394 aaKnown RBP18.46■□□□□ 0.55
LIN54-204ENST00000505397 SLFN11Q7Z7L1 901 aa18.46■□□□□ 0.55
LIN54-204ENST00000505397 KCTD17Q8N5Z5 321 aa18.46■□□□□ 0.55
LIN54-204ENST00000505397 TAF4BQ92750 862 aa18.46■□□□□ 0.55
LIN54-204ENST00000505397 BORCS6Q96GS4 357 aa18.46■□□□□ 0.55
LIN54-204ENST00000505397 POLR3CQ9BUI4 534 aaPredicted RBP18.46■□□□□ 0.55
LIN54-204ENST00000505397 ISCUQ9H1K1 167 aa18.46■□□□□ 0.55
LIN54-204ENST00000505397 ZNF112Q9UJU3 913 aa18.46■□□□□ 0.55
LIN54-204ENST00000505397 NR3C1P04150 777 aa18.45■□□□□ 0.54
LIN54-204ENST00000505397 ECHS1P30084 290 aa18.45■□□□□ 0.54
LIN54-204ENST00000505397 HSPA9P38646 679 aaKnown RBP18.45■□□□□ 0.54
LIN54-204ENST00000505397 KDM7AQ6ZMT4 941 aa18.45■□□□□ 0.54
LIN54-204ENST00000505397 BCAS4Q8TDM0 211 aa18.45■□□□□ 0.54
LIN54-204ENST00000505397 ZKSCAN4Q969J2 545 aaPredicted RBP18.45■□□□□ 0.54
LIN54-204ENST00000505397 CALR3Q96L12 384 aaKnown RBP18.45■□□□□ 0.54
LIN54-204ENST00000505397 AGBL1Q96MI9 1066 aa18.45■□□□□ 0.54
LIN54-204ENST00000505397 AJAP1Q9UKB5 411 aaPredicted RBP18.45■□□□□ 0.54
LIN54-204ENST00000505397 POLR2AP24928 1970 aaKnown RBP18.45■□□□□ 0.54
LIN54-204ENST00000505397 A0A0A6YYK5 440 aaPredicted RBP18.45■□□□□ 0.54
LIN54-204ENST00000505397 KCNK3O14649 394 aa18.45■□□□□ 0.54
LIN54-204ENST00000505397 MSH4O15457 936 aa18.45■□□□□ 0.54
LIN54-204ENST00000505397 DGKZQ13574 1117 aa18.45■□□□□ 0.54
LIN54-204ENST00000505397 EFCAB13Q8IY85 973 aa18.45■□□□□ 0.54
LIN54-204ENST00000505397 TPCN2Q8NHX9 752 aa18.45■□□□□ 0.54
LIN54-204ENST00000505397 WDR18Q9BV38 432 aa18.45■□□□□ 0.54
LIN54-204ENST00000505397 TAF1DQ9H5J8 278 aaPredicted RBP18.45■□□□□ 0.54
LIN54-204ENST00000505397 STXBP5LQ9Y2K9 1186 aa18.45■□□□□ 0.54
LIN54-204ENST00000505397 RSPH10B2B2RC85 870 aa18.44■□□□□ 0.54
LIN54-204ENST00000505397 RSPH10BP0C881 870 aa18.44■□□□□ 0.54
LIN54-204ENST00000505397 RPL13P26373 211 aaKnown RBP18.44■□□□□ 0.54
LIN54-204ENST00000505397 CCT5P48643 541 aa18.44■□□□□ 0.54
LIN54-204ENST00000505397 CPXCR1Q8N123 301 aa18.44■□□□□ 0.54
LIN54-204ENST00000505397 FAM107BQ9H098 131 aa18.44■□□□□ 0.54
LIN54-204ENST00000505397 RPAP3Q9H6T3 665 aaPredicted RBP18.44■□□□□ 0.54
LIN54-204ENST00000505397 OLFML3Q9NRN5 406 aa18.44■□□□□ 0.54
LIN54-204ENST00000505397 RNF181Q9P0P0 153 aa18.44■□□□□ 0.54
LIN54-204ENST00000505397 INTUQ9ULD6 942 aa18.44■□□□□ 0.54
LIN54-204ENST00000505397 EYA4O95677 639 aa18.44■□□□□ 0.54
LIN54-204ENST00000505397 CASP4P49662 377 aa18.44■□□□□ 0.54
LIN54-204ENST00000505397 RNASE9P60153 205 aaKnown RBP18.44■□□□□ 0.54
LIN54-204ENST00000505397 SUPT20HL1Q3ZLR7 823 aa18.44■□□□□ 0.54
LIN54-204ENST00000505397 ZNF280CQ8ND82 737 aa18.44■□□□□ 0.54
LIN54-204ENST00000505397 OLIG1Q8TAK6 271 aa18.44■□□□□ 0.54
LIN54-204ENST00000505397 RUSC1Q9BVN2 902 aa18.44■□□□□ 0.54
LIN54-204ENST00000505397 CPP00450 1065 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 PTPRAP18433 802 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 BACE1P56817 501 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 ERVK-9P63128 1117 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 NFIL3Q16649 462 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 MCF2L2Q86YR7 1114 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 RASGEF1CQ8N431 466 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 SH2D3CQ8N5H7 860 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 PPM1EQ8WY54 764 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 PPP1R9AQ9ULJ8 1098 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 RBBP6Q7Z6E9 1792 aaKnown RBP18.43■□□□□ 0.54
LIN54-204ENST00000505397 ZNF536O15090 1300 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 EBAG9O00559 213 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 TGFB1I1O43294 461 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 DDNO94850 711 aaPredicted RBP18.43■□□□□ 0.54
LIN54-204ENST00000505397 GUCY2FP51841 1108 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 NPEPPSP55786 919 aa18.43■□□□□ 0.54
LIN54-204ENST00000505397 BHMT2Q9H2M3 363 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms