RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 PRKCQQ04759 706 aa5.7□□□□□ -1.5
CSTF1-207ENST00000498689 LMOD3Q0VAK6 560 aa5.7□□□□□ -1.5
CSTF1-207ENST00000498689 FLIIQ13045 1269 aa5.7□□□□□ -1.5
CSTF1-207ENST00000498689 FKBP5Q13451 457 aaPredicted RBP5.7□□□□□ -1.5
CSTF1-207ENST00000498689 SERINC3Q13530 473 aa5.7□□□□□ -1.5
CSTF1-207ENST00000498689 PPP2R5BQ15173 497 aa5.7□□□□□ -1.5
CSTF1-207ENST00000498689 CCDC27Q2M243 656 aa5.7□□□□□ -1.5
CSTF1-207ENST00000498689 MUM1L1Q5H9M0 696 aa5.7□□□□□ -1.5
CSTF1-207ENST00000498689 RASGRP2Q7LDG7 609 aa5.7□□□□□ -1.5
CSTF1-207ENST00000498689 CHST3Q7LGC8 479 aa5.7□□□□□ -1.5
CSTF1-207ENST00000498689 TMC7Q7Z402 723 aa5.7□□□□□ -1.5
CSTF1-207ENST00000498689 LONP2Q86WA8 852 aa5.7□□□□□ -1.5
CSTF1-207ENST00000498689 MRPL43Q8N983 215 aaKnown RBP5.7□□□□□ -1.5
CSTF1-207ENST00000498689 SLC22A17Q8WUG5 538 aa5.7□□□□□ -1.5
CSTF1-207ENST00000498689 CHRDQ9H2X0 955 aa5.7□□□□□ -1.5
CSTF1-207ENST00000498689 GPCPD1Q9NPB8 672 aa5.7□□□□□ -1.5
CSTF1-207ENST00000498689 TMEM9BQ9NQ34 198 aa5.7□□□□□ -1.5
CSTF1-207ENST00000498689 VPS45Q9NRW7 570 aa5.7□□□□□ -1.5
CSTF1-207ENST00000498689 HMG20BQ9P0W2 317 aa5.7□□□□□ -1.5
CSTF1-207ENST00000498689 NDRG2Q9UN36 371 aaKnown RBP5.7□□□□□ -1.5
CSTF1-207ENST00000498689 FCF1Q9Y324 198 aaKnown RBP5.7□□□□□ -1.5
CSTF1-207ENST00000498689 HIVEP3Q5T1R4 2406 aa5.7□□□□□ -1.5
CSTF1-207ENST00000498689 PDS5AQ29RF7 1337 aaKnown RBP5.7□□□□□ -1.5
CSTF1-207ENST00000498689 RAD50Q92878 1312 aa5.7□□□□□ -1.5
CSTF1-207ENST00000498689 PATE3B3GLJ2 98 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 CHRNA1P02708 482 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 OATP04181 439 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 EEF2P13639 858 aaKnown RBP5.69□□□□□ -1.5
CSTF1-207ENST00000498689 CNR2P34972 360 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 CA8P35219 290 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 EIF2S3P41091 472 aaKnown RBP5.69□□□□□ -1.5
CSTF1-207ENST00000498689 ATP8B2P98198 1209 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 ICA1Q05084 483 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 GABPAQ06546 454 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 RABL6Q3YEC7 729 aaPredicted RBP5.69□□□□□ -1.5
CSTF1-207ENST00000498689 PARM1Q6UWI2 310 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 NFXL1Q6ZNB6 911 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 CABP7Q86V35 215 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 DHX37Q8IY37 1157 aaKnown RBP5.69□□□□□ -1.5
CSTF1-207ENST00000498689 CCDC146Q8IYE0 955 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 CYP4X1Q8N118 509 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 LOXL4Q96JB6 756 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 PSMG3-AS1Q96PY0 264 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 CWH43Q9H720 699 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 ACAD9Q9H845 621 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 SLC38A10Q9HBR0 1119 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 ARHGEF10LQ9HCE6 1279 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 NGRNQ9NPE2 291 aaKnown RBP5.69□□□□□ -1.5
CSTF1-207ENST00000498689 RNF146Q9NTX7 359 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 TYW1Q9NV66 732 aaKnown RBP5.69□□□□□ -1.5
CSTF1-207ENST00000498689 DZANK1Q9NVP4 752 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 CYP39A1Q9NYL5 469 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 GMPR2Q9P2T1 348 aaKnown RBP5.69□□□□□ -1.5
CSTF1-207ENST00000498689 DKK4Q9UBT3 224 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 FBXO40Q9UH90 709 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 LZTS1Q9Y250 596 aa5.69□□□□□ -1.5
CSTF1-207ENST00000498689 RTTNQ86VV8 2226 aa5.68□□□□□ -1.5
CSTF1-207ENST00000498689 PCDH15Q96QU1 1955 aa5.68□□□□□ -1.5
CSTF1-207ENST00000498689 DDX11L8A8MPP1 907 aa5.68□□□□□ -1.5
CSTF1-207ENST00000498689 H0Y626 953 aa5.68□□□□□ -1.5
CSTF1-207ENST00000498689 EYA2O00167 538 aa5.68□□□□□ -1.5
CSTF1-207ENST00000498689 TERTO14746 1132 aaKnown RBP5.68□□□□□ -1.5
CSTF1-207ENST00000498689 TRIM16O95361 564 aa5.68□□□□□ -1.5
CSTF1-207ENST00000498689 MYBP10242 640 aa5.68□□□□□ -1.5
CSTF1-207ENST00000498689 TXNP10599 105 aaKnown RBP5.68□□□□□ -1.5
CSTF1-207ENST00000498689 LAMP2P13473 410 aa5.68□□□□□ -1.5
CSTF1-207ENST00000498689 C6P13671 934 aa5.68□□□□□ -1.5
CSTF1-207ENST00000498689 ELAVL4P26378 380 aaKnown RBP5.68□□□□□ -1.5
CSTF1-207ENST00000498689 ADSSP30520 456 aa5.68□□□□□ -1.5
CSTF1-207ENST00000498689 RFX5P48382 616 aaPredicted RBP5.68□□□□□ -1.5
CSTF1-207ENST00000498689 ALDH5A1P51649 535 aaPredicted RBP5.68□□□□□ -1.5
CSTF1-207ENST00000498689 CCR3P51677 355 aa5.68□□□□□ -1.5
CSTF1-207ENST00000498689 TIMM10P62072 90 aa5.68□□□□□ -1.5
CSTF1-207ENST00000498689 ARHGAP1Q07960 439 aa5.68□□□□□ -1.5
CSTF1-207ENST00000498689 TRIM26Q12899 539 aaPredicted RBP5.68□□□□□ -1.5
CSTF1-207ENST00000498689 LPIN1Q14693 890 aa5.68□□□□□ -1.5
CSTF1-207ENST00000498689 TAF1BQ53T94 588 aaPredicted RBP5.68□□□□□ -1.5
CSTF1-207ENST00000498689 FAM102BQ5T8I3 360 aa5.68□□□□□ -1.5
CSTF1-207ENST00000498689 ZNF574Q6ZN55 896 aaPredicted RBP5.68□□□□□ -1.5
CSTF1-207ENST00000498689 PIP4P1Q86T03 277 aa5.68□□□□□ -1.5
CSTF1-207ENST00000498689 PLEKHM2Q8IWE5 1019 aa5.68□□□□□ -1.5
CSTF1-207ENST00000498689 LRRC47Q8N1G4 583 aaKnown RBP5.68□□□□□ -1.5
CSTF1-207ENST00000498689 ATP6V0A1Q93050 837 aa5.68□□□□□ -1.5
CSTF1-207ENST00000498689 NXPE3Q969Y0 559 aa5.68□□□□□ -1.5
CSTF1-207ENST00000498689 KIFC2Q96AC6 838 aa5.68□□□□□ -1.5
CSTF1-207ENST00000498689 NOL10Q9BSC4 688 aaKnown RBP5.68□□□□□ -1.5
CSTF1-207ENST00000498689 RTN4Q9NQC3 1192 aaKnown RBP5.68□□□□□ -1.5
CSTF1-207ENST00000498689 HEBP1Q9NRV9 189 aa5.68□□□□□ -1.5
CSTF1-207ENST00000498689 C9orf78Q9NZ63 289 aaPredicted RBP5.68□□□□□ -1.5
CSTF1-207ENST00000498689 CLUHO75153 1309 aa5.68□□□□□ -1.5
CSTF1-207ENST00000498689 TEX51A0A1B0GUA7 166 aa5.67□□□□□ -1.5
CSTF1-207ENST00000498689 TTC24A2A3L6 582 aaPredicted RBP5.67□□□□□ -1.5
CSTF1-207ENST00000498689 TBKBP1A7MCY6 615 aa5.67□□□□□ -1.5
CSTF1-207ENST00000498689 C2CD2LO14523 706 aa5.67□□□□□ -1.5
CSTF1-207ENST00000498689 NKRFO15226 690 aaKnown RBP eCLIP5.67□□□□□ -1.5
CSTF1-207ENST00000498689 NCAM2O15394 837 aa5.67□□□□□ -1.5
CSTF1-207ENST00000498689 ZBED4O75132 1171 aa5.67□□□□□ -1.5
CSTF1-207ENST00000498689 WFS1O76024 890 aa5.67□□□□□ -1.5
CSTF1-207ENST00000498689 CD2BP2O95400 341 aaKnown RBP5.67□□□□□ -1.5
CSTF1-207ENST00000498689 BAG3O95817 575 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms