RNA–Protein interactions for RNA: ENST00000498268.1

USP34-222, Transcript of ubiquitin specific peptidase 34, human

TSL 3

Gene USP34, Length 497 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP34-222	ENST00000498268	NKD2	Q969F2	451 aa	Predicted RBP	5.63	□□□□□ -1.51
USP34-222	ENST00000498268	SRPK1	Q96SB4	655 aa	Known RBP	5.63	□□□□□ -1.51
USP34-222	ENST00000498268	FOXB1	Q99853	325 aa		5.63	□□□□□ -1.51
USP34-222	ENST00000498268	HIRIP3	Q9BW71	556 aa	Predicted RBP	5.63	□□□□□ -1.51
USP34-222	ENST00000498268	MRPL4	Q9BYD3	311 aa	Known RBP	5.63	□□□□□ -1.51
USP34-222	ENST00000498268	SLC6A15	Q9H2J7	730 aa		5.63	□□□□□ -1.51
USP34-222	ENST00000498268	GPRC5B	Q9NZH0	403 aa		5.63	□□□□□ -1.51
USP34-222	ENST00000498268	SAE1	Q9UBE0	346 aa	Predicted RBP	5.63	□□□□□ -1.51
USP34-222	ENST00000498268	DENND2A	Q9ULE3	1009 aa		5.63	□□□□□ -1.51
USP34-222	ENST00000498268	VWA7	Q9Y334	891 aa		5.63	□□□□□ -1.51
USP34-222	ENST00000498268	REXO2	Q9Y3B8	237 aa	Known RBP	5.63	□□□□□ -1.51
USP34-222	ENST00000498268	TRAF5	O00463	557 aa		5.62	□□□□□ -1.51
USP34-222	ENST00000498268	HIP1R	O75146	1068 aa		5.62	□□□□□ -1.51
USP34-222	ENST00000498268	GLRX3	O76003	335 aa	Known RBP	5.62	□□□□□ -1.51
USP34-222	ENST00000498268	RAPGEF3	O95398	923 aa		5.62	□□□□□ -1.51
USP34-222	ENST00000498268	PRL	P01236	227 aa		5.62	□□□□□ -1.51
USP34-222	ENST00000498268	BPIFB4	P59827	614 aa		5.62	□□□□□ -1.51
USP34-222	ENST00000498268	AGAP2	Q99490	1192 aa		5.62	□□□□□ -1.51
USP34-222	ENST00000498268	MPHOSPH9	Q99550	1183 aa		5.62	□□□□□ -1.51
USP34-222	ENST00000498268	BOC	Q9BWV1	1114 aa		5.62	□□□□□ -1.51
USP34-222	ENST00000498268	NCOA5	Q9HCD5	579 aa	Known RBP	5.62	□□□□□ -1.51
USP34-222	ENST00000498268	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	5.62	□□□□□ -1.51
USP34-222	ENST00000498268	PTCH2	Q9Y6C5	1203 aa		5.62	□□□□□ -1.51
USP34-222	ENST00000498268	UBE2QL1	A1L167	161 aa		5.61	□□□□□ -1.51
USP34-222	ENST00000498268	NPTXR	O95502	500 aa		5.61	□□□□□ -1.51
USP34-222	ENST00000498268	ADH4	P08319	380 aa		5.61	□□□□□ -1.51
USP34-222	ENST00000498268	PTX3	P26022	381 aa	Predicted RBP	5.61	□□□□□ -1.51
USP34-222	ENST00000498268	KIF11	P52732	1056 aa		5.61	□□□□□ -1.51
USP34-222	ENST00000498268	INHBC	P55103	352 aa		5.61	□□□□□ -1.51
USP34-222	ENST00000498268	INHBE	P58166	350 aa		5.61	□□□□□ -1.51
USP34-222	ENST00000498268	KRTAP1-1	Q07627	177 aa		5.61	□□□□□ -1.51
USP34-222	ENST00000498268	CRHR2	Q13324	411 aa		5.61	□□□□□ -1.51
USP34-222	ENST00000498268	FAM111B	Q6SJ93	734 aa		5.61	□□□□□ -1.51
USP34-222	ENST00000498268	ZSWIM2	Q8NEG5	633 aa		5.61	□□□□□ -1.51
USP34-222	ENST00000498268	THAP3	Q8WTV1	239 aa	Predicted RBP	5.61	□□□□□ -1.51
USP34-222	ENST00000498268	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	5.61	□□□□□ -1.51
USP34-222	ENST00000498268	MAML3	Q96JK9	1138 aa		5.61	□□□□□ -1.51
USP34-222	ENST00000498268	PARPBP	Q9NWS1	579 aa		5.61	□□□□□ -1.51
USP34-222	ENST00000498268	XDH	P47989	1333 aa		5.6	□□□□□ -1.51
USP34-222	ENST00000498268	H2AFY	O75367	372 aa	Known RBP	5.6	□□□□□ -1.51
USP34-222	ENST00000498268	RPS6KA4	O75676	772 aa		5.6	□□□□□ -1.51
USP34-222	ENST00000498268	MAK	P20794	623 aa		5.6	□□□□□ -1.51
USP34-222	ENST00000498268	MAP3K12	Q12852	859 aa		5.6	□□□□□ -1.51
USP34-222	ENST00000498268	TCIRG1	Q13488	830 aa		5.6	□□□□□ -1.51
USP34-222	ENST00000498268	OR5AN1	Q8NGI8	311 aa		5.6	□□□□□ -1.51
USP34-222	ENST00000498268	SAMD15	Q9P1V8	674 aa		5.6	□□□□□ -1.51
USP34-222	ENST00000498268	CCDC163	A0A0D9SF12	145 aa		5.59	□□□□□ -1.51
USP34-222	ENST00000498268	HNRNPL	P14866	589 aa	Known RBP eCLIP	5.59	□□□□□ -1.51
USP34-222	ENST00000498268	RABGGTB	P53611	331 aa		5.59	□□□□□ -1.51
USP34-222	ENST00000498268	PTTG1IP	P53801	180 aa		5.59	□□□□□ -1.51
USP34-222	ENST00000498268	TOB2	Q14106	344 aa	Predicted RBP	5.59	□□□□□ -1.51
USP34-222	ENST00000498268	ZNF460	Q14592	562 aa		5.59	□□□□□ -1.51
USP34-222	ENST00000498268	C2orf27A	Q580R0	203 aa		5.59	□□□□□ -1.51
USP34-222	ENST00000498268	ZCCHC8	Q6NZY4	707 aa	Known RBP	5.59	□□□□□ -1.51
USP34-222	ENST00000498268	CLEC14A	Q86T13	490 aa		5.59	□□□□□ -1.51
USP34-222	ENST00000498268	ULK2	Q8IYT8	1036 aa		5.59	□□□□□ -1.51
USP34-222	ENST00000498268	ANKRD35	Q8N283	1001 aa		5.59	□□□□□ -1.51
USP34-222	ENST00000498268	PMFBP1	Q8TBY8	1022 aa		5.59	□□□□□ -1.51
USP34-222	ENST00000498268	GCDH	Q92947	438 aa	Predicted RBP	5.59	□□□□□ -1.51
USP34-222	ENST00000498268	LPP	Q93052	612 aa		5.59	□□□□□ -1.51
USP34-222	ENST00000498268	MIEF2	Q96C03	454 aa		5.59	□□□□□ -1.51
USP34-222	ENST00000498268	C16orf92	Q96LL3	132 aa		5.59	□□□□□ -1.51
USP34-222	ENST00000498268	DNAI1	Q9UI46	699 aa		5.59	□□□□□ -1.51
USP34-222	ENST00000498268	DMRT1	Q9Y5R6	373 aa		5.59	□□□□□ -1.51
USP34-222	ENST00000498268	PTPDC1	A2A3K4	754 aa		5.58	□□□□□ -1.52
USP34-222	ENST00000498268	GOLGA8B	A8MQT2	603 aa		5.58	□□□□□ -1.52
USP34-222	ENST00000498268	CYP27B1	O15528	508 aa		5.58	□□□□□ -1.52
USP34-222	ENST00000498268	FAM20B	O75063	409 aa		5.58	□□□□□ -1.52
USP34-222	ENST00000498268	DNAJC8	O75937	253 aa	Predicted RBP	5.58	□□□□□ -1.52
USP34-222	ENST00000498268	FNTB	P49356	437 aa		5.58	□□□□□ -1.52
USP34-222	ENST00000498268	NANOS3	P60323	173 aa	Known RBP	5.58	□□□□□ -1.52
USP34-222	ENST00000498268	ROM1	Q03395	351 aa		5.58	□□□□□ -1.52
USP34-222	ENST00000498268	COL10A1	Q03692	680 aa		5.58	□□□□□ -1.52
USP34-222	ENST00000498268	MYBPC3	Q14896	1274 aa		5.58	□□□□□ -1.52
USP34-222	ENST00000498268	ELAVL1	Q15717	326 aa	Known RBP	5.58	□□□□□ -1.52
USP34-222	ENST00000498268	DGKD	Q16760	1214 aa		5.58	□□□□□ -1.52
USP34-222	ENST00000498268	ARHGAP44	Q17R89	818 aa		5.58	□□□□□ -1.52
USP34-222	ENST00000498268	C1QL3	Q5VWW1	255 aa		5.58	□□□□□ -1.52
USP34-222	ENST00000498268	SLFN12L	Q6IEE8	588 aa		5.58	□□□□□ -1.52
USP34-222	ENST00000498268	ZNF575	Q86XF7	245 aa		5.58	□□□□□ -1.52
USP34-222	ENST00000498268	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.58	□□□□□ -1.52
USP34-222	ENST00000498268	RPUSD2	Q8IZ73	545 aa	Known RBP	5.58	□□□□□ -1.52
USP34-222	ENST00000498268	PLA2G15	Q8NCC3	412 aa		5.58	□□□□□ -1.52
USP34-222	ENST00000498268	GFM2	Q969S9	779 aa	Known RBP	5.58	□□□□□ -1.52
USP34-222	ENST00000498268	MKL1	Q969V6	931 aa		5.58	□□□□□ -1.52
USP34-222	ENST00000498268	ARMC5	Q96C12	935 aa		5.58	□□□□□ -1.52
USP34-222	ENST00000498268	KANSL2	Q9H9L4	492 aa		5.58	□□□□□ -1.52
USP34-222	ENST00000498268	TNPO3	Q9Y5L0	923 aa	Known RBP	5.58	□□□□□ -1.52
USP34-222	ENST00000498268	UBA6	A0AVT1	1052 aa	Predicted RBP	5.57	□□□□□ -1.52
USP34-222	ENST00000498268	KLRG2	A4D1S0	409 aa	Predicted RBP	5.57	□□□□□ -1.52
USP34-222	ENST00000498268	PLD2	O14939	933 aa		5.57	□□□□□ -1.52
USP34-222	ENST00000498268	STC2	O76061	302 aa		5.57	□□□□□ -1.52
USP34-222	ENST00000498268	TOX4	O94842	621 aa		5.57	□□□□□ -1.52
USP34-222	ENST00000498268	SLC9A1	P19634	815 aa		5.57	□□□□□ -1.52
USP34-222	ENST00000498268	MAN2A2	P49641	1150 aa		5.57	□□□□□ -1.52
USP34-222	ENST00000498268	SESN2	P58004	480 aa	Predicted RBP	5.57	□□□□□ -1.52
USP34-222	ENST00000498268	PURA	Q00577	322 aa	Known RBP	5.57	□□□□□ -1.52
USP34-222	ENST00000498268	CNGB1	Q14028	1251 aa	Predicted RBP	5.57	□□□□□ -1.52
USP34-222	ENST00000498268	UNQ6494/PRO21346	Q6UXR6	183 aa		5.57	□□□□□ -1.52
USP34-222	ENST00000498268	MRGPRG	Q86SM5	289 aa		5.57	□□□□□ -1.52

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms