RNA–Protein interactions for RNA: ENST00000497511.5

SKAP2-209, Transcript of src kinase associated phosphoprotein 2, human

TSL 4

Gene SKAP2, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKAP2-209	ENST00000497511	FAM26D	Q5JW98	314 aa		12.48	□□□□□ -0.41
SKAP2-209	ENST00000497511	TICAM2	Q86XR7	235 aa		12.48	□□□□□ -0.41
SKAP2-209	ENST00000497511	MICAL1	Q8TDZ2	1067 aa		12.48	□□□□□ -0.41
SKAP2-209	ENST00000497511	ATOH1	Q92858	354 aa	Predicted RBP	12.48	□□□□□ -0.41
SKAP2-209	ENST00000497511	CLP1	Q92989	425 aa	Known RBP	12.48	□□□□□ -0.41
SKAP2-209	ENST00000497511	GPR20	Q99678	358 aa		12.48	□□□□□ -0.41
SKAP2-209	ENST00000497511	IRF2BPL	Q9H1B7	796 aa		12.48	□□□□□ -0.41
SKAP2-209	ENST00000497511	BCAS3	Q9H6U6	928 aa		12.48	□□□□□ -0.41
SKAP2-209	ENST00000497511	TIMMDC1	Q9NPL8	285 aa		12.48	□□□□□ -0.41
SKAP2-209	ENST00000497511	ZSWIM5	Q9P217	1185 aa		12.48	□□□□□ -0.41
SKAP2-209	ENST00000497511	PLAGL2	Q9UPG8	496 aa		12.48	□□□□□ -0.41
SKAP2-209	ENST00000497511	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.48	□□□□□ -0.41
SKAP2-209	ENST00000497511	KIAA1217	Q5T5P2	1943 aa		12.48	□□□□□ -0.41
SKAP2-209	ENST00000497511	PALM3	A6NDB9	673 aa	Predicted RBP	12.47	□□□□□ -0.41
SKAP2-209	ENST00000497511	TMEM229A	B2RXF0	380 aa		12.47	□□□□□ -0.41
SKAP2-209	ENST00000497511	PPP1R11	O60927	126 aa	Predicted RBP	12.47	□□□□□ -0.41
SKAP2-209	ENST00000497511	STAM2	O75886	525 aa		12.47	□□□□□ -0.41
SKAP2-209	ENST00000497511	CHRNA1	P02708	482 aa		12.47	□□□□□ -0.41
SKAP2-209	ENST00000497511	SMTN	P53814	917 aa		12.47	□□□□□ -0.41
SKAP2-209	ENST00000497511	RRP1	P56182	461 aa	Known RBP	12.47	□□□□□ -0.41
SKAP2-209	ENST00000497511	PPFIA1	Q13136	1202 aa		12.47	□□□□□ -0.41
SKAP2-209	ENST00000497511	LPIN1	Q14693	890 aa		12.47	□□□□□ -0.41
SKAP2-209	ENST00000497511	PAN2	Q504Q3	1202 aa	Known RBP	12.47	□□□□□ -0.41
SKAP2-209	ENST00000497511	SPOUT1	Q5T280	376 aa	Known RBP	12.47	□□□□□ -0.41
SKAP2-209	ENST00000497511	SV2A	Q7L0J3	742 aa		12.47	□□□□□ -0.41
SKAP2-209	ENST00000497511	EFHB	Q8N7U6	833 aa		12.47	□□□□□ -0.41
SKAP2-209	ENST00000497511	RHBDD1	Q8TEB9	315 aa		12.47	□□□□□ -0.41
SKAP2-209	ENST00000497511	P2RX5	Q93086	422 aa		12.47	□□□□□ -0.41
SKAP2-209	ENST00000497511	CNNM2	Q9H8M5	875 aa		12.47	□□□□□ -0.41
SKAP2-209	ENST00000497511	DIAPH3	Q9NSV4	1193 aa		12.47	□□□□□ -0.41
SKAP2-209	ENST00000497511	USP15	Q9Y4E8	981 aa	Predicted RBP	12.47	□□□□□ -0.41
SKAP2-209	ENST00000497511	MRPL42	Q9Y6G3	142 aa	Known RBP	12.47	□□□□□ -0.41
SKAP2-209	ENST00000497511	ZNF318	Q5VUA4	2279 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	WDFY4	Q6ZS81	3184 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511		M0QZ92	97 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	DGKI	O75912	1065 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	EYA4	O95677	639 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	STAU1	O95793	577 aa	Known RBP	12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	STAG3L1	P0CL83	205 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	SDS	P20132	328 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	MARK3	P27448	753 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	GMPR	P36959	345 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	IGBP1	P78318	339 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	SIGLEC14	Q08ET2	396 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	TCF15	Q12870	199 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	NAALADL2	Q58DX5	795 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	CWC27	Q6UX04	472 aa	Known RBP	12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	RUFY4	Q6ZNE9	571 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	ADGRD2	Q7Z7M1	963 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	NLRX1	Q86UT6	975 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	CMTR2	Q8IYT2	770 aa	Known RBP	12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	KLHL23	Q8NBE8	558 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	SMRP1	Q8NCR6	262 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	POF1B	Q8WVV4	589 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	DNAJB3	Q8WWF6	145 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	PIBF1	Q8WXW3	757 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	GLG1	Q92896	1179 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	MSLNL	Q96KJ4	702 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	INPP4A	Q96PE3	977 aa	Predicted RBP	12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	PIGS	Q96S52	555 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	PHF7	Q9BWX1	381 aa	Predicted RBP	12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	TLE6	Q9H808	572 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	TUBE1	Q9UJT0	475 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	LRFN2	Q9ULH4	789 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	BARX2	Q9UMQ3	279 aa	Predicted RBP	12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	MAFB	Q9Y5Q3	323 aa	Predicted RBP	12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	CDY2A	Q9Y6F7	541 aa		12.46	□□□□□ -0.41
SKAP2-209	ENST00000497511	LOC730098	B7Z3J9	87 aa		12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	ITGB1	P05556	798 aa		12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	LINC00271	P0C7V0	271 aa		12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	CD52	P31358	61 aa		12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	ICAM3	P32942	547 aa		12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	TCF7	P36402	384 aa	Predicted RBP	12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	INSM1	Q01101	510 aa	Predicted RBP	12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	COASY	Q13057	564 aa		12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	FBXO47	Q5MNV8	452 aa		12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	LCE2C	Q5TA81	110 aa		12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	TSHZ1	Q6ZSZ6	1077 aa		12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	NPAS4	Q8IUM7	802 aa		12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	GIMAP8	Q8ND71	665 aa	Predicted RBP	12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	SMARCC2	Q8TAQ2	1214 aa		12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	SPPL3	Q8TCT6	385 aa		12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	CUL5	Q93034	780 aa		12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	ZNF689	Q96CS4	500 aa	Predicted RBP	12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	FTHL17	Q9BXU8	183 aa		12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	FAM49A	Q9H0Q0	323 aa	Predicted RBP	12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	EHMT1	Q9H9B1	1298 aa		12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	RC3H2	Q9HBD1	1191 aa	Known RBP	12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	DNAAF2	Q9NVR5	837 aa	Known RBP	12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	CLEC1B	Q9P126	229 aa		12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	MAD2L2	Q9UI95	211 aa		12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	RBM19	Q9Y4C8	960 aa	Known RBP	12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	MYH7B	A7E2Y1	1941 aa		12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	TECTA	O75443	2155 aa		12.45	□□□□□ -0.42
SKAP2-209	ENST00000497511	PNMA6F	A0A0J9YX94	578 aa		12.44	□□□□□ -0.42
SKAP2-209	ENST00000497511	ERICH2	A1L162	156 aa		12.44	□□□□□ -0.42
SKAP2-209	ENST00000497511	SRGAP2B	P0DMP2	458 aa		12.44	□□□□□ -0.42
SKAP2-209	ENST00000497511	DNAJB1	P25685	340 aa		12.44	□□□□□ -0.42
SKAP2-209	ENST00000497511	ADAM17	P78536	824 aa		12.44	□□□□□ -0.42
SKAP2-209	ENST00000497511	MRPS6	P82932	125 aa	Known RBP	12.44	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms