RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 GCLMP48507 274 aa16.9■□□□□ 0.3
CACUL1-206ENST00000493518 FNTAP49354 379 aa16.9■□□□□ 0.3
CACUL1-206ENST00000493518 ODR4Q5SWX8 454 aa16.9■□□□□ 0.3
CACUL1-206ENST00000493518 CDCA7Q9BWT1 371 aaPredicted RBP16.9■□□□□ 0.3
CACUL1-206ENST00000493518 EDEM3Q9BZQ6 932 aa16.9■□□□□ 0.3
CACUL1-206ENST00000493518 KCNK9Q9NPC2 374 aa16.9■□□□□ 0.3
CACUL1-206ENST00000493518 SPATA31C1P0DKV0 1188 aa16.9■□□□□ 0.3
CACUL1-206ENST00000493518 RPL13P26373 211 aaKnown RBP16.9■□□□□ 0.3
CACUL1-206ENST00000493518 EPHA7Q15375 998 aa16.9■□□□□ 0.3
CACUL1-206ENST00000493518 CCDC105Q8IYK2 499 aa16.9■□□□□ 0.3
CACUL1-206ENST00000493518 CCDC127Q96BQ5 260 aa16.9■□□□□ 0.3
CACUL1-206ENST00000493518 PSMD1Q99460 953 aa16.9■□□□□ 0.3
CACUL1-206ENST00000493518 PRMT1Q99873 361 aaKnown RBP16.9■□□□□ 0.3
CACUL1-206ENST00000493518 PAIP2Q9BPZ3 127 aaKnown RBP16.9■□□□□ 0.3
CACUL1-206ENST00000493518 UBE2TQ9NPD8 197 aaPredicted RBP16.9■□□□□ 0.3
CACUL1-206ENST00000493518 DOT1LQ8TEK3 1739 aa16.9■□□□□ 0.3
CACUL1-206ENST00000493518 FOXN3O00409 490 aaPredicted RBP16.89■□□□□ 0.29
CACUL1-206ENST00000493518 CPP00450 1065 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 CUL1Q13616 776 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 CERKLQ49MI3 558 aaPredicted RBP16.89■□□□□ 0.29
CACUL1-206ENST00000493518 EPC2Q52LR7 807 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 SEPT14Q6ZU15 432 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 PRPF38AQ8NAV1 312 aaKnown RBP16.89■□□□□ 0.29
CACUL1-206ENST00000493518 LMBR1Q8WVP7 490 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 MYCBPQ99417 103 aaPredicted RBP16.89■□□□□ 0.29
CACUL1-206ENST00000493518 EIF2AK1Q9BQI3 630 aaKnown RBP16.89■□□□□ 0.29
CACUL1-206ENST00000493518 TCRBV7S2A1N4TA0A589 114 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 MSH4O15457 936 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 RGS16O15492 202 aaPredicted RBP16.89■□□□□ 0.29
CACUL1-206ENST00000493518 TNIP1Q15025 636 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 DCAF12L1Q5VU92 463 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 DAB2IPQ5VWQ8 1189 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 DENND2CQ68D51 928 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 CDC42EP5Q6NZY7 148 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 CAPN12Q6ZSI9 719 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 SLF2Q8IX21 1173 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 FAM178BQ8IXR5 827 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 GDAP1Q8TB36 358 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 TACO1Q9BSH4 297 aaKnown RBP16.89■□□□□ 0.29
CACUL1-206ENST00000493518 ASTN1O14525 1302 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 TMEM150BA6NC51 233 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 DDTLA6NHG4 134 aaPredicted RBP16.89■□□□□ 0.29
CACUL1-206ENST00000493518 F8VZ95 297 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 DLG4P78352 724 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 ICA1Q05084 483 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 HP1BP3Q5SSJ5 553 aaPredicted RBP16.89■□□□□ 0.29
CACUL1-206ENST00000493518 ZFYVE27Q5T4F4 411 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 MSL1Q68DK7 614 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 CNPY4Q8N129 248 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 ZSWIM2Q8NEG5 633 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 SYN2Q92777 582 aaPredicted RBP16.89■□□□□ 0.29
CACUL1-206ENST00000493518 HVCN1Q96D96 273 aa16.89■□□□□ 0.29
CACUL1-206ENST00000493518 MEIS2O14770 477 aa16.88■□□□□ 0.29
CACUL1-206ENST00000493518 SORBS3O60504 671 aa16.88■□□□□ 0.29
CACUL1-206ENST00000493518 SSR1P43307 286 aaKnown RBP16.88■□□□□ 0.29
CACUL1-206ENST00000493518 PWWP2AQ96N64 755 aa16.88■□□□□ 0.29
CACUL1-206ENST00000493518 NCAPGQ9BPX3 1015 aa16.88■□□□□ 0.29
CACUL1-206ENST00000493518 STK38LQ9Y2H1 464 aa16.88■□□□□ 0.29
CACUL1-206ENST00000493518 SPATA31A5Q5VU36 1347 aa16.88■□□□□ 0.29
CACUL1-206ENST00000493518 SPATA31A7Q8IWB4 1347 aa16.88■□□□□ 0.29
CACUL1-206ENST00000493518 GOLGA6L10A0A0M3HER8 536 aa16.88■□□□□ 0.29
CACUL1-206ENST00000493518 F5H6K3 240 aa16.88■□□□□ 0.29
CACUL1-206ENST00000493518 H0YGN5 161 aa16.88■□□□□ 0.29
CACUL1-206ENST00000493518 KLRC3Q07444 240 aa16.88■□□□□ 0.29
CACUL1-206ENST00000493518 HS2ST1Q7LGA3 356 aa16.88■□□□□ 0.29
CACUL1-206ENST00000493518 NFS1Q9Y697 457 aa16.88■□□□□ 0.29
CACUL1-206ENST00000493518 MYH1P12882 1939 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 MYH4Q9Y623 1939 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 TRAPPC3O43617 180 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 SPOPO43791 374 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 FTLP02792 175 aaPredicted RBP16.87■□□□□ 0.29
CACUL1-206ENST00000493518 CREB1P16220 341 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 LONRF1Q17RB8 773 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 FBXO11Q86XK2 927 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 KIF2BQ8N4N8 673 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 LBHD1Q9BQE6 289 aaPredicted RBP16.87■□□□□ 0.29
CACUL1-206ENST00000493518 VCPKMTQ9H867 229 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 COG5Q9UP83 839 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 ABCB11O95342 1321 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 ATP2B4P23634 1241 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 TNFRSF8P28908 595 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 COBLL1Q53SF7 1204 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 GPATCH4Q5T3I0 446 aaKnown RBP16.87■□□□□ 0.29
CACUL1-206ENST00000493518 SLC30A5Q8TAD4 765 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 ACTRT1Q8TDG2 376 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 C1orf54Q8WWF1 131 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 ARAP2Q8WZ64 1704 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 ZKSCAN4Q969J2 545 aaPredicted RBP16.87■□□□□ 0.29
CACUL1-206ENST00000493518 SIX2Q9NPC8 291 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 SLC12A6Q9UHW9 1150 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 ALG6Q9Y672 507 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 ROBO3Q96MS0 1386 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 TGFB1I1O43294 461 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 CYB5D1Q6P9G0 228 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 FRMD5Q7Z6J6 570 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 LRRC34Q8IZ02 419 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 PPM1KQ8N3J5 372 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 N4BP2L2Q92802 583 aaPredicted RBP16.87■□□□□ 0.29
CACUL1-206ENST00000493518 TYW1Q9NV66 732 aaKnown RBP16.87■□□□□ 0.29
CACUL1-206ENST00000493518 INTS9Q9NV88 658 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms