RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 A0A087X0M5 115 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 A0A0B4J269 797 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 A0A1B0GX30 115 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 CTAGE9A4FU28 777 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 LRRC14BA6NHZ5 514 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 K7EPI3 171 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 ST8SIA5O15466 376 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 GLRX3O76003 335 aaKnown RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 DXOO77932 396 aaKnown RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 POP4O95707 220 aaKnown RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 STARD3NLO95772 234 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 USP17L7P0C7H9 530 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 RHOXF2BP0C7M4 288 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 DHRS4L1P0CG22 281 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 PDHBP11177 359 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 COL6A2P12110 1019 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 MYCLP12524 364 aaPredicted RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 PDGFRAP16234 1089 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 MAPK3P27361 379 aaPredicted RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 HOXA11P31270 313 aaPredicted RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 PRKAR1BP31321 381 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 IARSP41252 1262 aaKnown RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 ID4P47928 161 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 PLTPP55058 493 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 ICA1Q05084 483 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 RUNX1T1Q06455 604 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 SLC14A1Q13336 389 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 CUL2Q13617 745 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 MXD4Q14582 209 aaPredicted RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 PCBP2Q15366 365 aaKnown RBP eCLIP4.61□□□□□ -1.672e-7■■■□□ 17.1
BRCA1-220ENST00000492859 SMAD1Q15797 465 aaKnown RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 ZNF792Q3KQV3 632 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 ARL13BQ3SXY8 428 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 CCDC38Q502W7 563 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 TTBK2Q6IQ55 1244 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 FBXL19Q6PCT2 694 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 RGS9BPQ6ZS82 235 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 ATCAYQ86WG3 371 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 CCDC24Q8N4L8 307 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 CAMKK1Q8N5S9 505 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 ZBTB8BQ8NAP8 495 aaPredicted RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 SPC24Q8NBT2 197 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 ZSCAN18Q8TBC5 510 aaPredicted RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 ZFAND2BQ8WV99 257 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 L3MBTL2Q969R5 705 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 RUNDC3BQ96NL0 473 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 RHOXF2Q9BQY4 288 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 NACAP1Q9BZK3 213 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 TSGA10Q9BZW7 698 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 ARHGAP39Q9C0H5 1083 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 NT5C3AQ9H0P0 336 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 GBP3Q9H0R5 595 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 TRPV6Q9H1D0 765 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 SMARCAD1Q9H4L7 1026 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 MMRN2Q9H8L6 949 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 PDE7BQ9NP56 450 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 WASH6PQ9NQA3 447 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 GLRX2Q9NS18 164 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 OLA1Q9NTK5 396 aaKnown RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 GPRC5BQ9NZH0 403 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 EXTL2Q9UBQ6 330 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 GIT1Q9Y2X7 761 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 PCDHGB6Q9Y5F9 930 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 AP1M2Q9Y6Q5 423 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 CGNL1Q0VF96 1302 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 SCRIBQ14160 1630 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 RSF1Q96T23 1441 aaPredicted RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 PGPEP1LA6NFU8 196 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 NEMP1O14524 444 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 IKBKBO14920 756 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 TSPAN1O60635 241 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 PQBP1O60828 265 aaKnown RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 RNGTTO60942 597 aaKnown RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 ATP5BP06576 529 aaKnown RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 CKMT1AP12532 417 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 ZNF3P17036 446 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 ENDOUP21128 410 aaKnown RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 ABCB4P21439 1286 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 MCM5P33992 734 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 GIPRP48546 466 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 GPC3P51654 580 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 NR1H2P55055 460 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 RIPK4P57078 832 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 USP46P62068 366 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 CENPCQ03188 943 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 PPIDQ08752 370 aaKnown RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 KIF5AQ12840 1032 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 GRB10Q13322 594 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 RBBP5Q15291 538 aaKnown RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 DHCR24Q15392 516 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 TAF12Q16514 161 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 TMEM240Q5SV17 173 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 FOXB2Q5VYV0 432 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 PM20D1Q6GTS8 502 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 MRM1Q6IN84 353 aaKnown RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 LBX2Q6XYB7 198 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 ZNF804AQ7Z570 1209 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 CREG2Q8IUH2 290 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 GALNT12Q8IXK2 581 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 RNF214Q8ND24 703 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms