RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 TBX10O75333 385 aa21.86■■□□□ 1.09
TNFRSF1B-202ENST00000489921 DARSP14868 501 aaKnown RBP21.86■■□□□ 1.09
TNFRSF1B-202ENST00000489921 XKR3Q5GH77 459 aa21.86■■□□□ 1.09
TNFRSF1B-202ENST00000489921 LRRC55Q6ZSA7 311 aa21.86■■□□□ 1.09
TNFRSF1B-202ENST00000489921 KRT25Q7Z3Z0 450 aa21.86■■□□□ 1.09
TNFRSF1B-202ENST00000489921 OXER1Q8TDS5 423 aa21.86■■□□□ 1.09
TNFRSF1B-202ENST00000489921 CASD1Q96PB1 797 aa21.86■■□□□ 1.09
TNFRSF1B-202ENST00000489921 MAP7D2Q96T17 732 aa21.86■■□□□ 1.09
TNFRSF1B-202ENST00000489921 SLKQ9H2G2 1235 aaPredicted RBP21.86■■□□□ 1.09
TNFRSF1B-202ENST00000489921 IGFLR1Q9H665 355 aa21.86■■□□□ 1.09
TNFRSF1B-202ENST00000489921 PPP4R2Q9NY27 417 aa21.86■■□□□ 1.09
TNFRSF1B-202ENST00000489921 DDX25Q9UHL0 483 aaKnown RBP21.86■■□□□ 1.09
TNFRSF1B-202ENST00000489921 TBC1D8BQ0IIM8 1120 aa21.85■■□□□ 1.09
TNFRSF1B-202ENST00000489921 EARS2Q5JPH6 523 aaKnown RBP21.85■■□□□ 1.09
TNFRSF1B-202ENST00000489921 ZNF710Q8N1W2 664 aa21.85■■□□□ 1.09
TNFRSF1B-202ENST00000489921 LRFN3Q9BTN0 628 aa21.85■■□□□ 1.09
TNFRSF1B-202ENST00000489921 ATP6V0A4Q9HBG4 840 aa21.85■■□□□ 1.09
TNFRSF1B-202ENST00000489921 KCNMB3Q9NPA1 279 aa21.85■■□□□ 1.09
TNFRSF1B-202ENST00000489921 VAV3Q9UKW4 847 aa21.85■■□□□ 1.09
TNFRSF1B-202ENST00000489921 C19orf67A6NJJ6 358 aa21.84■■□□□ 1.09
TNFRSF1B-202ENST00000489921 CSDE1O75534 798 aaKnown RBP21.84■■□□□ 1.09
TNFRSF1B-202ENST00000489921 NEFLP07196 543 aa21.84■■□□□ 1.09
TNFRSF1B-202ENST00000489921 FDPSP14324 419 aaKnown RBP21.84■■□□□ 1.09
TNFRSF1B-202ENST00000489921 FGFR4P22455 802 aa21.84■■□□□ 1.09
TNFRSF1B-202ENST00000489921 AK2P54819 239 aa21.84■■□□□ 1.09
TNFRSF1B-202ENST00000489921 ANAPC15P60006 121 aa21.84■■□□□ 1.09
TNFRSF1B-202ENST00000489921 ZP2Q05996 745 aa21.84■■□□□ 1.09
TNFRSF1B-202ENST00000489921 LETM2Q2VYF4 491 aa21.84■■□□□ 1.09
TNFRSF1B-202ENST00000489921 MTERF2Q49AM1 385 aa21.84■■□□□ 1.09
TNFRSF1B-202ENST00000489921 PPP4R3AQ6IN85 833 aa21.84■■□□□ 1.09
TNFRSF1B-202ENST00000489921 ANO5Q75V66 913 aa21.84■■□□□ 1.09
TNFRSF1B-202ENST00000489921 HAS1Q92839 578 aa21.84■■□□□ 1.09
TNFRSF1B-202ENST00000489921 MSLNLQ96KJ4 702 aa21.84■■□□□ 1.09
TNFRSF1B-202ENST00000489921 RNF216Q9NWF9 866 aaPredicted RBP21.84■■□□□ 1.09
TNFRSF1B-202ENST00000489921 CLEC1BQ9P126 229 aa21.84■■□□□ 1.09
TNFRSF1B-202ENST00000489921 SEPT9Q9UHD8 586 aaPredicted RBP21.84■■□□□ 1.09
TNFRSF1B-202ENST00000489921 MBTPS2O43462 519 aa21.83■■□□□ 1.09
TNFRSF1B-202ENST00000489921 CDKL5O76039 1030 aa21.83■■□□□ 1.09
TNFRSF1B-202ENST00000489921 PPP2R5CQ13362 524 aa21.83■■□□□ 1.09
TNFRSF1B-202ENST00000489921 SMAD2Q15796 467 aaKnown RBP21.83■■□□□ 1.09
TNFRSF1B-202ENST00000489921 CLUL1Q15846 466 aa21.83■■□□□ 1.09
TNFRSF1B-202ENST00000489921 ECHDC2Q86YB7 292 aa21.83■■□□□ 1.09
TNFRSF1B-202ENST00000489921 COLGALT1Q8NBJ5 622 aa21.83■■□□□ 1.09
TNFRSF1B-202ENST00000489921 WRAP73Q9P2S5 460 aaPredicted RBP21.83■■□□□ 1.09
TNFRSF1B-202ENST00000489921 PCDHB12Q9Y5F1 795 aa21.83■■□□□ 1.09
TNFRSF1B-202ENST00000489921 GPR37L1O60883 481 aa21.82■■□□□ 1.08
TNFRSF1B-202ENST00000489921 MAFO75444 373 aaPredicted RBP21.82■■□□□ 1.08
TNFRSF1B-202ENST00000489921 FGF18O76093 207 aa21.82■■□□□ 1.08
TNFRSF1B-202ENST00000489921 LARGE1O95461 756 aa21.82■■□□□ 1.08
TNFRSF1B-202ENST00000489921 GLP2RO95838 553 aa21.82■■□□□ 1.08
TNFRSF1B-202ENST00000489921 ATF7P17544 494 aaPredicted RBP21.82■■□□□ 1.08
TNFRSF1B-202ENST00000489921 ERVFC1P60507 584 aa21.82■■□□□ 1.08
TNFRSF1B-202ENST00000489921 NEK8Q86SG6 692 aa21.82■■□□□ 1.08
TNFRSF1B-202ENST00000489921 ZNF598Q86UK7 904 aaKnown RBP21.82■■□□□ 1.08
TNFRSF1B-202ENST00000489921 EFHBQ8N7U6 833 aa21.82■■□□□ 1.08
TNFRSF1B-202ENST00000489921 FAM20AQ96MK3 541 aa21.82■■□□□ 1.08
TNFRSF1B-202ENST00000489921 TMEM117Q9H0C3 514 aa21.82■■□□□ 1.08
TNFRSF1B-202ENST00000489921 PRKAG3Q9UGI9 489 aa21.82■■□□□ 1.08
TNFRSF1B-202ENST00000489921 A0A0U1RQF3 1178 aa21.81■■□□□ 1.08
TNFRSF1B-202ENST00000489921 CCDC194A0A1B0GVG4 234 aa21.81■■□□□ 1.08
TNFRSF1B-202ENST00000489921 FAM205CA6NFA0 338 aa21.81■■□□□ 1.08
TNFRSF1B-202ENST00000489921 DDX11L8A8MPP1 907 aa21.81■■□□□ 1.08
TNFRSF1B-202ENST00000489921 NRIP1P48552 1158 aa21.81■■□□□ 1.08
TNFRSF1B-202ENST00000489921 PSMC5P62195 406 aa21.81■■□□□ 1.08
TNFRSF1B-202ENST00000489921 UBE3AQ05086 875 aa21.81■■□□□ 1.08
TNFRSF1B-202ENST00000489921 ME3Q16798 604 aa21.81■■□□□ 1.08
TNFRSF1B-202ENST00000489921 CLLU1OSQ5K130 101 aa21.81■■□□□ 1.08
TNFRSF1B-202ENST00000489921 PIK3AP1Q6ZUJ8 805 aa21.81■■□□□ 1.08
TNFRSF1B-202ENST00000489921 ZNF579Q8NAF0 562 aaKnown RBP21.81■■□□□ 1.08
TNFRSF1B-202ENST00000489921 NLRP7Q8WX94 980 aa21.81■■□□□ 1.08
TNFRSF1B-202ENST00000489921 TNFRSF25Q93038 417 aa21.81■■□□□ 1.08
TNFRSF1B-202ENST00000489921 A0A087WZ62 844 aa21.8■■□□□ 1.08
TNFRSF1B-202ENST00000489921 FSCN2O14926 492 aa21.8■■□□□ 1.08
TNFRSF1B-202ENST00000489921 EYA4O95677 639 aa21.8■■□□□ 1.08
TNFRSF1B-202ENST00000489921 ZSCAN20P17040 1043 aaPredicted RBP21.8■■□□□ 1.08
TNFRSF1B-202ENST00000489921 SSTR3P32745 418 aaPredicted RBP21.8■■□□□ 1.08
TNFRSF1B-202ENST00000489921 TMEM31Q5JXX7 168 aa21.8■■□□□ 1.08
TNFRSF1B-202ENST00000489921 SPOUT1Q5T280 376 aaKnown RBP21.8■■□□□ 1.08
TNFRSF1B-202ENST00000489921 PLA2G4FQ68DD2 849 aa21.8■■□□□ 1.08
TNFRSF1B-202ENST00000489921 RBM23Q86U06 439 aaKnown RBP21.8■■□□□ 1.08
TNFRSF1B-202ENST00000489921 ADHFE1Q8IWW8 467 aa21.8■■□□□ 1.08
TNFRSF1B-202ENST00000489921 NECAB1Q8N987 351 aa21.8■■□□□ 1.08
TNFRSF1B-202ENST00000489921 FDXACB1Q9BRP7 624 aaPredicted RBP21.8■■□□□ 1.08
TNFRSF1B-202ENST00000489921 AAASQ9NRG9 546 aa21.8■■□□□ 1.08
TNFRSF1B-202ENST00000489921 ORC3Q9UBD5 711 aaPredicted RBP21.8■■□□□ 1.08
TNFRSF1B-202ENST00000489921 WDFY4Q6ZS81 3184 aa21.79■■□□□ 1.08
TNFRSF1B-202ENST00000489921 FAM86C2PA6NEL3 165 aa21.79■■□□□ 1.08
TNFRSF1B-202ENST00000489921 CCNT1O60563 726 aaKnown RBP21.79■■□□□ 1.08
TNFRSF1B-202ENST00000489921 GCFC2P16383 781 aaKnown RBP21.79■■□□□ 1.08
TNFRSF1B-202ENST00000489921 NPEPPSP55786 919 aa21.79■■□□□ 1.08
TNFRSF1B-202ENST00000489921 SPIRE1Q08AE8 756 aa21.79■■□□□ 1.08
TNFRSF1B-202ENST00000489921 NR5A1Q13285 461 aa21.79■■□□□ 1.08
TNFRSF1B-202ENST00000489921 SMAD4Q13485 552 aaKnown RBP21.79■■□□□ 1.08
TNFRSF1B-202ENST00000489921 KSR1Q8IVT5 923 aa21.79■■□□□ 1.08
TNFRSF1B-202ENST00000489921 VN1R2Q8NFZ6 395 aa21.79■■□□□ 1.08
TNFRSF1B-202ENST00000489921 TLR9Q9NR96 1032 aa21.79■■□□□ 1.08
TNFRSF1B-202ENST00000489921 SUCLA2Q9P2R7 463 aaPredicted RBP21.79■■□□□ 1.08
TNFRSF1B-202ENST00000489921 CD207Q9UJ71 328 aa21.79■■□□□ 1.08
TNFRSF1B-202ENST00000489921 FAM50BQ9Y247 325 aa21.79■■□□□ 1.08
TNFRSF1B-202ENST00000489921 ARID2Q68CP9 1835 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms